Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03070 Brassica napus
A03p32760 Brassica napus
A04p10620 Brassica napus
A04p15240 Brassica napus
Aa31LG11G14070 Aethionema arabicum
Aa31LG5G12610 Aethionema arabicum
Aa31LG9G17580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2601 Anthoceros agrestis
Actinidia01986 Actinidia chinensis
Actinidia28788 Actinidia chinensis
Actinidia35716 Actinidia chinensis
Ah.12g062660 Amaranthus hybridus
AL3G11270 Arabidopsis lyrata
AL6G26360 Arabidopsis lyrata
AL7G46220 Arabidopsis lyrata
Aqoxy3G03590 Aquilegia oxysepala
Aqoxy3G04034 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.882L60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.91G1KL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WG02M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD246K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2TG86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6HCQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PI996E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6WLGC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3589T Arachis hypogaea
AT3G01015 Arabidopsis thaliana
AT5G15510 Arabidopsis thaliana
AT5G37478 Arabidopsis thaliana
ATR0064G099 Amborella trichopoda
ATR0681G017 Amborella trichopoda
Atru.chr1.1956 Acer truncatum
Atru.chr4.1442 Acer truncatum
Atru.chr8.414 Acer truncatum
AUR62018170 Chenopodium quinoa
AUR62042424 Chenopodium quinoa
BcaB06g27073 Brassica carinata
BcaB06g27694 Brassica carinata
BcaC01g04460 Brassica carinata
BcaC01g04491 Brassica carinata
BcaC01g04492 Brassica carinata
BcaC02g09575 Brassica carinata
BolC2t06706H Brassica oleracea
BolC3t16249H Brassica oleracea
BolC4t26005H Brassica oleracea
BolC4t26533H Brassica oleracea
BraA02t05277Z Brassica rapa
BraA03t12445Z Brassica rapa
BraA04t16725Z Brassica rapa
BraA04t17164Z Brassica rapa
C02p07760 Brassica napus
C03p39860 Brassica napus
C04p44300 Brassica napus
C04p44310 Brassica napus
C04p49460 Brassica napus
CAN.G398.9 Capsicum annuum
CAN.G525.5 Capsicum annuum
CAN.G761.14 Capsicum annuum
CAN.G860.3 Capsicum annuum
CAN.G979.6 Capsicum annuum
CANSAT64G1295 Cannabis sativa
CANSAT78G0020 Cannabis sativa
CARHR034310 Cardamine hirsuta
CARHR197800 Cardamine hirsuta
CARHR215480 Cardamine hirsuta
Carub.0003s0118 Capsella rubella
Carub.0006s1367 Capsella rubella
Carub.0007s3264 Capsella rubella
Ca_04299_v3 Cicer arietinum L.
Ca_04325_v3 Cicer arietinum L.
CBR_g54824 Chara braunii
Cc07_g03970 Coffea canephora
Cc07_g03980 Coffea canephora
Cc07_g12970 Coffea canephora
CDE04G1025 Ceratophyllum demersum
CDE04G2346 Ceratophyllum demersum
CDE06G0126 Ceratophyllum demersum
CDE07G0905 Ceratophyllum demersum
Cfa007644 Carpinus fangiana
Cfa007769 Carpinus fangiana
Ciclev10006566m.g Citrus clementina
Ciclev10006617m.g Citrus clementina
Ciclev10011468m.g Citrus clementina
CiPaw.03G077700 Carya illinoinensis
CiPaw.03G090300 Carya illinoinensis
CiPaw.04G048700 Carya illinoinensis
CiPaw.04G057300 Carya illinoinensis
ClCG01G008660 Citrullus lanatus
ClCG05G012160 Citrullus lanatus
ClCG11G004680 Citrullus lanatus
COL.COLO4_05844 Corchorus olitorius
COL.COLO4_21397 Corchorus olitorius
Cpa.g.sc14.165 Carica papaya
Cpa.g.sc178.6 Carica papaya
CsaV3_3G020310 Cucumis sativus L.
CsaV3_5G024340 Cucumis sativus L.
CsaV3_5G038450 Cucumis sativus L.
CSS0003424 Camellia sinensis var. sinensis
CSS0004087 Camellia sinensis var. sinensis
CSS0010449 Camellia sinensis var. sinensis
CSS0028622 Camellia sinensis var. sinensis
DCAR_003416 Daucus carota
DCAR_011046 Daucus carota
DCAR_025421 Daucus carota
Dinv19069 Davidia involucrata
Dinv28229 Davidia involucrata
Dinv33820 Davidia involucrata
Dinv34956 Davidia involucrata
Duzib138G1248 Durio zibethinus
Duzib187G0626 Durio zibethinus
Duzib211G0346 Durio zibethinus
Duzib264G1038 Durio zibethinus
ECA232G0412 Erigeron canadensis
ECA238G0127 Erigeron canadensis
EL10Ac2g03120 Beta vulgaris
Eucgr.I01972 Eucalyptus grandis
Eucgr.J01635 Eucalyptus grandis
FAN02G2985 Fragaria x ananassa
FAN05G3685 Fragaria x ananassa
FAN09G2487 Fragaria x ananassa
FAN14G1077 Fragaria x ananassa
FAN19G1091 Fragaria x ananassa
FAN23G0962 Fragaria x ananassa
FAN26G0916 Fragaria x ananassa
FAN28G1343 Fragaria x ananassa
FvH4_1g30340 Fragaria vesca
FvH4_6g47160 Fragaria vesca
Glyma.08G243100 Glycine max
Glyma.11G213500 Glycine max
Glyma.13G057600 Glycine max
Glyma.18G043200 Glycine max
Glyma.18G265200 Glycine max
Glyma.19G028600 Glycine max
Gohir.A05G371400 Gossypium hirsutum
Gohir.A08G038800 Gossypium hirsutum
Gohir.A09G010500 Gossypium hirsutum
Gohir.A12G087200 Gossypium hirsutum
Gohir.D04G044300 Gossypium hirsutum
Gohir.D08G049000 Gossypium hirsutum
Gohir.D09G009600 Gossypium hirsutum
Gohir.D12G085300 Gossypium hirsutum
Gorai.004G048500 Gossypium raimondii
Gorai.006G011300 Gossypium raimondii
Gorai.008G095700 Gossypium raimondii
Gorai.012G049600 Gossypium raimondii
GSVIVG01011508001 Vitis vinifera
GSVIVG01026314001 Vitis vinifera
GSVIVG01026315001 Vitis vinifera
HanXRQChr07g0190201 Helianthus annuus
HanXRQChr14g0450091 Helianthus annuus
HanXRQChr17g0551801 Helianthus annuus
Haze_14450 Corylus avellana
Hma1.2p1_0029F.1_g018100 Hydrangea macrophylla
Hma1.2p1_0158F.1_g069810 Hydrangea macrophylla
Hma1.2p1_0481F.1_g161980 Hydrangea macrophylla
HPP92_008046 Vanilla planifolia
HPP92_020443 Vanilla planifolia
Hund13064 Selenicereus undatus
Hund13160 Selenicereus undatus
Lalb_Chr02g0158991 Lupinus albus
Lalb_Chr06g0175031 Lupinus albus
Lalb_Chr15g0085131 Lupinus albus
Lalb_Chr17g0337051 Lupinus albus
Lj1g0015427 Lotus japonicus
Lj2g0004119 Lotus japonicus
Lj6g0022426 Lotus japonicus
Lju41A4G60 Lonicera japonica
Lju41A4T69 Lonicera japonica
Lsat_1_v5_gn_0_16980 Lactuca sativa
Lsat_1_v5_gn_1_66341 Lactuca sativa
Lsat_1_v5_gn_2_71520 Lactuca sativa
Lsat_1_v5_gn_2_87661 Lactuca sativa
Lsat_1_v5_gn_4_170421 Lactuca sativa
Lsat_1_v5_gn_4_170461 Lactuca sativa
Lsat_1_v5_gn_4_82620 Lactuca sativa
Lsat_1_v5_gn_5_188940 Lactuca sativa
Lsat_1_v5_gn_6_10920 Lactuca sativa
Lsat_1_v5_gn_8_99500 Lactuca sativa
Manes.01G097800 Manihot esculenta
Manes.01G121900 Manihot esculenta
Manes.02G053500 Manihot esculenta
Manes.02G079900 Manihot esculenta
Mapoly0061s0044 Marchantia polymorpha
Mapoly0105s0040 Marchantia polymorpha
MBI05_g37892_MAGBIO Magnolia biondii
MBI05_g37893_MAGBIO Magnolia biondii
MBI09_g05207_MAGBIO Magnolia biondii
MBI16_g19290_MAGBIO Magnolia biondii
MBI16_g20811_MAGBIO Magnolia biondii
MBI19_g05182_MAGBIO Magnolia biondii
MD00G1005800 Malus domestica
MD00G1006000 Malus domestica
MD09G1063100 Malus domestica
MD09G1063500 Malus domestica
MD09G1063700 Malus domestica
MD09G1276000 Malus domestica
MD17G1057000 Malus domestica
MD17G1270100 Malus domestica
Medtr3g064800 Medicago truncatula
Medtr4g094612 Medicago truncatula
Medtr6g015010 Medicago truncatula
Medtr7g013070 Medicago truncatula
MELO3C022026.2 Cucumis melo
MELO3C032079.2 Cucumis melo
MELO3C033923.2 Cucumis melo
Migut.H00641 Erythranthe guttata
Migut.K01112 Erythranthe guttata
Migut.K01279 Erythranthe guttata
MSTRG.23892 Avicennia marina
MSTRG.3012 Avicennia marina
MSTRG.3349 Avicennia marina
Nitab4.5_0000212g0200 Nicotiana tabacum
Nitab4.5_0000574g0170 Nicotiana tabacum
Nitab4.5_0005193g0050 Nicotiana tabacum
Nitab4.5_0005916g0010 Nicotiana tabacum
Nn3g17407 Nelumbo nucifera
Nn3g18480 Nelumbo nucifera
Nn4g24578 Nelumbo nucifera
Oeu009436.1 Olea europaea
Oeu010244.1 Olea europaea
Oeu023713.2 Olea europaea
Oeu039122.1 Olea europaea
Oeu048970.3 Olea europaea
Os03g0212600 Oryza sativa ssp. japonica
Os09g0307300 Oryza sativa ssp. japonica
Os12g0577000 Oryza sativa ssp. japonica
Peaxi162Scf00166g00531 Petunia axillaris
Peaxi162Scf00629g00419 Petunia axillaris
Peaxi162Scf01560g00012 Petunia axillaris
PGR004G1461 Punica granatum
PGR004G2324 Punica granatum
PGSC0003DMG400019384 Solanum tuberosum
PGSC0003DMG400025143 Solanum tuberosum
PGSC0003DMG400025148 Solanum tuberosum
Phvul.001G227700 Phaseolus vulgaris
Phvul.004G034600 Phaseolus vulgaris
Phvul.004G034700 Phaseolus vulgaris
Potri.004G118700 Populus trichocarpa
Potri.017G092100 Populus trichocarpa
Potri.017G144061 Populus trichocarpa
Pp3c5_10270 Physcomitrium patens
Prupe.3G016300 Prunus persica
Prupe.3G257100 Prunus persica
Psat1g066680 Pisum sativum
Psat3g200400 Pisum sativum
PSO017G2611 Papaver somniferum
PSO170G3501 Papaver somniferum
PSO478G1573 Papaver somniferum
QL02p039183 Quercus lobata
QL02p060063 Quercus lobata
RcHm_v2.0_Chr2g0166211 Rosa chinensis
RcHm_v2.0_Chr3g0490251 Rosa chinensis
Rhsim08G0020300 Rhododendron simsii
Rhsim08G0020600 Rhododendron simsii
Rhsim10G0044000 Rhododendron simsii
Sabra04G0068600 Salix brachista
Sabra17G0081100 Salix brachista
SalBow1G3233 Salvia bowleyana
SalBow1G6128 Salvia bowleyana
SalBow5G0096 Salvia bowleyana
Sc10g0004610 Simmondsia chinensis
Sc14g0006890 Simmondsia chinensis
Sed0008165 Sechium edule
Sed0010755 Sechium edule
Sed0024127 Sechium edule
SEGI_07399 Sequoiadendron giganteum
SEGI_19308 Sequoiadendron giganteum
SEGI_22232 Sequoiadendron giganteum
SEGI_33547 Sequoiadendron giganteum
SEGI_38077 Sequoiadendron giganteum
SEGI_40620 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02401 Striga asiatica
SHI25776 Sapria himalayana
Solyc02g066980.1 Solanum lycopersicum
Solyc02g067100.3 Solanum lycopersicum
Solyc02g094740.1 Solanum lycopersicum
Solyc02g094750.1 Solanum lycopersicum
Solyc04g014550.3 Solanum lycopersicum
Sopen02g016180 Solanum pennellii
Sopen02g016290 Solanum pennellii
Sopen04g006710 Solanum pennellii
Sp3g01130 Schrenkiella parvula
Sp6g28590 Schrenkiella parvula
Sp7g04720 Schrenkiella parvula
TAR371G0954 Trochodendron aralioides
TAR371G0965 Trochodendron aralioides
TAR622G1434 Trochodendron aralioides
TAR629G1357 Trochodendron aralioides
TAR629G1814 Trochodendron aralioides
THA.LOC104805647 Tarenaya hassleriana
THA.LOC104821005 Tarenaya hassleriana
THA.LOC104822338 Tarenaya hassleriana
Thecc.04G061200 Theobroma cacao
Thecc.04G092600 Theobroma cacao
Thhalv10013627m.g Eutrema salsugineum
Thhalv10020582m.g Eutrema salsugineum
Thhalv10027959m.g Eutrema salsugineum
TPR.G10017 Trifolium pratense
TPR.G26685 Trifolium pratense
TPR.G33430 Trifolium pratense
TPR.G9999 Trifolium pratense
TWI34G0351 Tripterygium wilfordii
TWI53G0944 Tripterygium wilfordii
TWI60G0152 Tripterygium wilfordii
TWI74G1487 Tripterygium wilfordii
unitig_748.g8428 Utricularia gibba
unitig_748.g8450 Utricularia gibba
vmacro05654 Vaccinium macrocarpon
vmacro18516 Vaccinium macrocarpon
VMungo0464G0669 Vigna mungo
VMungo0464G2089 Vigna mungo
VMungo1383G3305 Vigna mungo
Zm00001eb008500 Zea mays
Zm00001eb029570 Zea mays
Zm00001eb097880 Zea mays
Zm00001eb136270 Zea mays
Zm00001eb400340 Zea mays

User provided reference genes

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