Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05840 Brassica napus
A08p34850 Brassica napus
A09p65620 Brassica napus
Aa31sc136G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.835 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.170 Anthoceros agrestis
Actinidia01462 Actinidia chinensis
Actinidia05685 Actinidia chinensis
Actinidia08915 Actinidia chinensis
Actinidia23651 Actinidia chinensis
Actinidia36847 Actinidia chinensis
Actinidia40250 Actinidia chinensis
Actinidia40251 Actinidia chinensis
Ah.04g160360 Amaranthus hybridus
Ah.06g189480 Amaranthus hybridus
AL1G19450 Arabidopsis lyrata
Aqoxy2G03051 Aquilegia oxysepala
Aqoxy5G00657 Aquilegia oxysepala
Aqoxy5G03017 Aquilegia oxysepala
Aqoxy5G03018 Aquilegia oxysepala
Aqoxy6G02807 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B5S4LJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KX6P8K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ML1F2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU7ZVQ Arachis hypogaea
AT1G09020 Arabidopsis thaliana
ATR0706G230 Amborella trichopoda
Atru.chr2.359 Acer truncatum
Atru.chr4.2801 Acer truncatum
Atru.chr4.2802 Acer truncatum
AUR62000807 Chenopodium quinoa
AUR62005161 Chenopodium quinoa
BcaB07g34119 Brassica carinata
BcaC05g24753 Brassica carinata
BcaC07g38469 Brassica carinata
BcaC07g41908 Brassica carinata
BolC5t29460H Brassica oleracea
BolC8t48881H Brassica oleracea
BolC8t52498H Brassica oleracea
BraA06t23794Z Brassica rapa
BraA08t35396Z Brassica rapa
BraA09t41906Z Brassica rapa
C05p07050 Brassica napus
C08p12410 Brassica napus
C08p49700 Brassica napus
CAN.G1008.45 Capsicum annuum
CAN.G1034.24 Capsicum annuum
CAN.G223.18 Capsicum annuum
CANSAT54G0129 Cannabis sativa
CANSAT78G2473 Cannabis sativa
CARHR008910 Cardamine hirsuta
Carub.0001s0834 Capsella rubella
Ca_05810_v3 Cicer arietinum L.
Ca_10117_v3 Cicer arietinum L.
Ca_10137_v3 Cicer arietinum L.
Ca_21533_v3 Cicer arietinum L.
CBR_g22060 Chara braunii
Cc02_g33290 Coffea canephora
Cc03_g02060 Coffea canephora
Cc04_g05690 Coffea canephora
CDE01G0552 Ceratophyllum demersum
CDE05G2787 Ceratophyllum demersum
CDE12G0773 Ceratophyllum demersum
Cfa006602 Carpinus fangiana
Cfa015367 Carpinus fangiana
Ciclev10000984m.g Citrus clementina
Ciclev10004799m.g Citrus clementina
CiPaw.01G150500 Carya illinoinensis
CiPaw.02G084500 Carya illinoinensis
CiPaw.07G019000 Carya illinoinensis
CiPaw.08G163800 Carya illinoinensis
CiPaw.08G172600 Carya illinoinensis
ClCG06G005280 Citrullus lanatus
COL.COLO4_13899 Corchorus olitorius
Cpa.g.sc16.154 Carica papaya
Cpa.g.sc16.156 Carica papaya
Cpa.g.sc48.71 Carica papaya
Cre12.g484350 Chlamydomonas reinhardtii
CsaV3_6G017330 Cucumis sativus L.
CSS0007501 Camellia sinensis var. sinensis
CSS0019245 Camellia sinensis var. sinensis
CSS0026972 Camellia sinensis var. sinensis
CSS0029143 Camellia sinensis var. sinensis
CSS0029500 Camellia sinensis var. sinensis
CSS0040291 Camellia sinensis var. sinensis
CSS0043577 Camellia sinensis var. sinensis
CSS0043685 Camellia sinensis var. sinensis
CSS0045503 Camellia sinensis var. sinensis
DCAR_024559 Daucus carota
DCAR_025635 Daucus carota
DCAR_027085 Daucus carota
DCAR_027086 Daucus carota
DCAR_030540 Daucus carota
Dinv13702 Davidia involucrata
Dinv30776 Davidia involucrata
Dinv38305 Davidia involucrata
Dinv40303 Davidia involucrata
Dinv44399 Davidia involucrata
Dinv44400 Davidia involucrata
Duzib052G0601 Durio zibethinus
Duzib128G0464 Durio zibethinus
Duzib151G0890 Durio zibethinus
Duzib177G0180 Durio zibethinus
Duzib212G0315 Durio zibethinus
ECA234G0557 Erigeron canadensis
ECA247G3703 Erigeron canadensis
EL10Ac4g09404 Beta vulgaris
Eucgr.H03882 Eucalyptus grandis
FAN02G4595 Fragaria x ananassa
FAN05G0428 Fragaria x ananassa
FAN07G0952 Fragaria x ananassa
FAN09G2447 Fragaria x ananassa
FAN11G3583 Fragaria x ananassa
FAN12G0743 Fragaria x ananassa
FAN12G1350 Fragaria x ananassa
FAN14G1558 Fragaria x ananassa
FAN16G1520 Fragaria x ananassa
FAN17G0187 Fragaria x ananassa
FAN22G1723 Fragaria x ananassa
FAN25G3255 Fragaria x ananassa
FvH4_3g04200 Fragaria vesca
FvH4_4g17690 Fragaria vesca
FvH4_6g06180 Fragaria vesca
Glyma.03G236900 Glycine max
Glyma.07G249700 Glycine max
Glyma.09G046800 Glycine max
Glyma.10G153700 Glycine max
Glyma.15G154300 Glycine max
Glyma.17G024700 Glycine max
Glyma.19G234600 Glycine max
Glyma.20G234600 Glycine max
Gohir.A02G048300 Gossypium hirsutum
Gohir.A08G209700 Gossypium hirsutum
Gohir.A09G240000 Gossypium hirsutum
Gohir.A10G162700 Gossypium hirsutum
Gohir.A11G265800 Gossypium hirsutum
Gohir.A11G295200 Gossypium hirsutum
Gohir.D02G053400 Gossypium hirsutum
Gohir.D08G226600 Gossypium hirsutum
Gohir.D09G240800 Gossypium hirsutum
Gohir.D10G169100 Gossypium hirsutum
Gohir.D11G275900 Gossypium hirsutum
Gohir.D11G311700 Gossypium hirsutum
Gorai.004G240500 Gossypium raimondii
Gorai.005G059200 Gossypium raimondii
Gorai.006G264100 Gossypium raimondii
Gorai.007G298100 Gossypium raimondii
Gorai.007G342100 Gossypium raimondii
Gorai.011G188600 Gossypium raimondii
GSVIVG01000091001 Vitis vinifera
GSVIVG01017767001 Vitis vinifera
HanXRQChr03g0080891 Helianthus annuus
HanXRQChr03g0090621 Helianthus annuus
HanXRQChr10g0297811 Helianthus annuus
HanXRQChr10g0316001 Helianthus annuus
HanXRQChr13g0410101 Helianthus annuus
Haze_01235 Corylus avellana
Haze_04175 Corylus avellana
Hma1.2p1_0698F.1_g205330 Hydrangea macrophylla
Hma1.2p1_1334F.1_g276320 Hydrangea macrophylla
HPP92_010659 Vanilla planifolia
HPP92_011822 Vanilla planifolia
HPP92_013704 Vanilla planifolia
Hund07079 Selenicereus undatus
Lalb_Chr07g0177641 Lupinus albus
Lalb_Chr15g0077251 Lupinus albus
Lalb_Chr18g0045681 Lupinus albus
Lalb_Chr18g0051801 Lupinus albus
Lalb_Chr20g0114431 Lupinus albus
Lj1g0019878 Lotus japonicus
Lj4g0019649 Lotus japonicus
Lj5A504G36 Lonicera japonica
Lj5A504G37 Lonicera japonica
Lj5A85T110 Lonicera japonica
Lj5g0015789 Lotus japonicus
Lj5g0026589 Lotus japonicus
Lj6A672G26 Lonicera japonica
Lj6g0006467 Lotus japonicus
Lju1819C2G19 Lonicera japonica
Lsat_1_v5_gn_1_30080 Lactuca sativa
Lsat_1_v5_gn_5_146681 Lactuca sativa
Lsat_1_v5_gn_5_52020 Lactuca sativa
Lsat_1_v5_gn_5_9401 Lactuca sativa
Manes.03G192700 Manihot esculenta
Manes.08G120100 Manihot esculenta
Manes.09G168100 Manihot esculenta
Manes.15G014200 Manihot esculenta
Mapoly0051s0005 Marchantia polymorpha
MBI07_g07555_MAGBIO Magnolia biondii
MBI19_g24000_MAGBIO Magnolia biondii
MCO11G921 Micromonas commoda
MD04G1203600 Malus domestica
MD12G1217400 Malus domestica
MD13G1170700 Malus domestica
MD16G1172400 Malus domestica
Medtr0392s0010 Medicago truncatula
Medtr1g083050 Medicago truncatula
Medtr4g119400 Medicago truncatula
Medtr7g113330 Medicago truncatula
MELO3C021347.2 Cucumis melo
Migut.G00181 Erythranthe guttata
Migut.N00105 Erythranthe guttata
MSTRG.20427 Avicennia marina
MSTRG.21804 Avicennia marina
MSTRG.22820 Avicennia marina
MSTRG.24787 Avicennia marina
MSTRG.3932 Avicennia marina
Nitab4.5_0000137g0040 Nicotiana tabacum
Nitab4.5_0000784g0070 Nicotiana tabacum
Nitab4.5_0000976g0160 Nicotiana tabacum
Nitab4.5_0003156g0030 Nicotiana tabacum
Nitab4.5_0004985g0050 Nicotiana tabacum
Nitab4.5_0013689g0010 Nicotiana tabacum
Nn3g21381 Nelumbo nucifera
Nn4g22092 Nelumbo nucifera
Nn4g25934 Nelumbo nucifera
Oeu012103.1 Olea europaea
Oeu017205.1 Olea europaea
Oeu021110.1 Olea europaea
Oeu026306.3 Olea europaea
Oeu029258.2 Olea europaea
Os03g0856400 Oryza sativa ssp. japonica
Os04g0401300 Oryza sativa ssp. japonica
Peaxi162Scf00037g00716 Petunia axillaris
Peaxi162Scf00314g00751 Petunia axillaris
Peaxi162Scf00386g00413 Petunia axillaris
PGR004G2575 Punica granatum
PGR031G1313 Punica granatum
PGSC0003DMG400014170 Solanum tuberosum
PGSC0003DMG401010657 Solanum tuberosum
PGSC0003DMG402010657 Solanum tuberosum
PGSC0003DMG402024742 Solanum tuberosum
Phvul.003G103000 Phaseolus vulgaris
Phvul.006G091100 Phaseolus vulgaris
Phvul.007G179400 Phaseolus vulgaris
Phvul.009G246000 Phaseolus vulgaris
Potri.005G028800 Populus trichocarpa
Potri.005G029300 Populus trichocarpa
Potri.005G029900 Populus trichocarpa
Potri.008G216800 Populus trichocarpa
Potri.010G023500 Populus trichocarpa
Potri.013G020400 Populus trichocarpa
Pp3c11_18670 Physcomitrium patens
Pp3c7_5010 Physcomitrium patens
PRCOL_00002888 Prasinoderma coloniale
Prupe.1G139100 Prunus persica
Prupe.6G323700 Prunus persica
Psat0s2406g0160 Pisum sativum
Psat0s2745g0120 Pisum sativum
Psat1g153160 Pisum sativum
Psat4g027960 Pisum sativum
Psat5g008040 Pisum sativum
PSO017G3656 Papaver somniferum
PSO170G1318 Papaver somniferum
PSO210G0979 Papaver somniferum
PSO210G3547 Papaver somniferum
PSO478G1222 Papaver somniferum
PSO832G1373 Papaver somniferum
QL03p007418 Quercus lobata
QL03p007686 Quercus lobata
QL06p008290 Quercus lobata
RcHm_v2.0_Chr3g0455191 Rosa chinensis
RcHm_v2.0_Chr4g0421631 Rosa chinensis
Rhsim04G0219500 Rhododendron simsii
Rhsim07G0186000 Rhododendron simsii
Rhsim12G0182200 Rhododendron simsii
Sabra05G0033400 Salix brachista
Sabra10G0015300 Salix brachista
Sabra13G0022900 Salix brachista
SalBow2G1100 Salvia bowleyana
SalBow2G1814 Salvia bowleyana
SalBow5G0615 Salvia bowleyana
SalBow7G3540 Salvia bowleyana
Sc06g0003260 Simmondsia chinensis
Sc09g0003110 Simmondsia chinensis
Sc16g0008500 Simmondsia chinensis
Sc19g0005050 Simmondsia chinensis
Sed0013858 Sechium edule
Sed0025025 Sechium edule
SEGI_17247 Sequoiadendron giganteum
SEGI_23681 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39291 Striga asiatica
SGA_v2.0_scaffold428G51520 Striga asiatica
SMO244G0080 Selaginella moellendorffii
Solyc01g067590.3 Solanum lycopersicum
Solyc01g099280.3 Solanum lycopersicum
Solyc03g118070.3 Solanum lycopersicum
Sopen01g029540 Solanum pennellii
Sopen01g042830 Solanum pennellii
Sopen03g036970 Solanum pennellii
Sp1g07630 Schrenkiella parvula
TAR362G0013 Trochodendron aralioides
TAR374G1492 Trochodendron aralioides
TAR622G0599 Trochodendron aralioides
TAR633G2083 Trochodendron aralioides
THA.LOC104802551 Tarenaya hassleriana
THA.LOC104805883 Tarenaya hassleriana
THA.LOC104820842 Tarenaya hassleriana
THA.LOC104821769 Tarenaya hassleriana
Thecc.04G282100 Theobroma cacao
Thecc.05G309800 Theobroma cacao
Thhalv10007484m.g Eutrema salsugineum
TPR.G14622 Trifolium pratense
TPR.G31152 Trifolium pratense
TPR.G33182 Trifolium pratense
TPR.G5240 Trifolium pratense
TWI09G1206 Tripterygium wilfordii
TWI12G1293 Tripterygium wilfordii
TWI36G1555 Tripterygium wilfordii
TWI53G0864 Tripterygium wilfordii
TWI56G0250 Tripterygium wilfordii
unitig_37.g12391 Utricularia gibba
unitig_46.g18687 Utricularia gibba
vmacro04971 Vaccinium macrocarpon
vmacro08124 Vaccinium macrocarpon
vmacro16764 Vaccinium macrocarpon
VMungo0540G1377 Vigna mungo
VMungo0720G0241 Vigna mungo
VMungo0720G2177 Vigna mungo
VMungo1215G2585 Vigna mungo
VMungo1309G1195 Vigna mungo
Zm00001eb045310 Zea mays
Zm00001eb064940 Zea mays
Zm00001eb084670 Zea mays
Zm00001eb210470 Zea mays
Zm00001eb271300 Zea mays
Zm00001eb357500 Zea mays
Zm00001eb421550 Zea mays

User provided reference genes

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