Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00960 Brassica napus
A08p37610 Brassica napus
A09p54460 Brassica napus
A09p68590 Brassica napus
Aa31LG10G15680 Aethionema arabicum
Aa31LG10G16410 Aethionema arabicum
Aa31LG1G9900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2783 Anthoceros agrestis
Actinidia10118 Actinidia chinensis
Actinidia20221 Actinidia chinensis
Actinidia21414 Actinidia chinensis
Actinidia27609 Actinidia chinensis
Actinidia27610 Actinidia chinensis
Ah.02g112140 Amaranthus hybridus
Ah.04g162300 Amaranthus hybridus
Ah.11g049370 Amaranthus hybridus
AL1G12000 Arabidopsis lyrata
AL5G44180 Arabidopsis lyrata
AL5G45340 Arabidopsis lyrata
Aqoxy2G02792 Aquilegia oxysepala
Aqoxy7G00123 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7L16MH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2LJVL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8E435 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IGB0ZL Arachis hypogaea
AT1G02660 Arabidopsis thaliana
AT3G61680 Arabidopsis thaliana
AT3G62590 Arabidopsis thaliana
ATR0320G001 Amborella trichopoda
ATR0320G003 Amborella trichopoda
ATR0706G200 Amborella trichopoda
Atru.chr5.1038 Acer truncatum
Atru.chr5.649 Acer truncatum
AUR62004472 Chenopodium quinoa
AUR62011834 Chenopodium quinoa
AUR62023478 Chenopodium quinoa
AUR62024676 Chenopodium quinoa
BcaB02g08147 Brassica carinata
BcaB03g13506 Brassica carinata
BcaC02g10245 Brassica carinata
BcaC07g37002 Brassica carinata
BcaC07g40734 Brassica carinata
BcaC07g42308 Brassica carinata
BcaC07g42400 Brassica carinata
BcaC07g42769 Brassica carinata
BolC4t24653H Brassica oleracea
BolC8t46818H Brassica oleracea
BolC8t51313H Brassica oleracea
BolC8t52835H Brassica oleracea
BraA04t15814Z Brassica rapa
BraA08t35658Z Brassica rapa
BraA09t40859Z Brassica rapa
BraA09t42202Z Brassica rapa
C04p31140 Brassica napus
C08p00150 Brassica napus
C08p37350 Brassica napus
C08p53200 Brassica napus
CAN.G362.40 Capsicum annuum
CAN.G986.22 Capsicum annuum
CANSAT25G0528 Cannabis sativa
CANSAT56G3215 Cannabis sativa
CARHR001940 Cardamine hirsuta
CARHR171990 Cardamine hirsuta
CARHR172860 Cardamine hirsuta
Carub.0001s0171 Capsella rubella
Carub.0005s2843 Capsella rubella
Carub.0005s2925 Capsella rubella
Ca_09202_v3 Cicer arietinum L.
Ca_09501_v3 Cicer arietinum L.
Ca_10294_v3 Cicer arietinum L.
Ca_30261_v3 Cicer arietinum L.
CBR_g29730 Chara braunii
Cc01_g21270 Coffea canephora
Cc02_g39190 Coffea canephora
Cc05_g04060 Coffea canephora
CDE02G1495 Ceratophyllum demersum
CDE02G2593 Ceratophyllum demersum
CDE05G3141 Ceratophyllum demersum
CDE11G0196 Ceratophyllum demersum
Cfa005823 Carpinus fangiana
Ciclev10018154m.g Citrus clementina
Ciclev10018997m.g Citrus clementina
CiPaw.01G074600 Carya illinoinensis
CiPaw.07G115800 Carya illinoinensis
CiPaw.08G091000 Carya illinoinensis
CiPaw.09G092400 Carya illinoinensis
ClCG09G005220 Citrullus lanatus
ClCG09G009580 Citrullus lanatus
COL.COLO4_06301 Corchorus olitorius
COL.COLO4_23254 Corchorus olitorius
COL.COLO4_23255 Corchorus olitorius
Cpa.g.sc18.19 Carica papaya
Cpa.g.sc273.5 Carica papaya
Cre03.g193500 Chlamydomonas reinhardtii
Cre05.g248200 Chlamydomonas reinhardtii
CsaV3_7G025220 Cucumis sativus L.
CsaV3_7G029850 Cucumis sativus L.
CSS0016868 Camellia sinensis var. sinensis
CSS0032589 Camellia sinensis var. sinensis
CSS0039923 Camellia sinensis var. sinensis
DCAR_002878 Daucus carota
DCAR_005381 Daucus carota
DCAR_005772 Daucus carota
DCAR_012366 Daucus carota
DCAR_025248 Daucus carota
Dinv10079 Davidia involucrata
Dinv18734 Davidia involucrata
Dinv32572 Davidia involucrata
Dinv33104 Davidia involucrata
Dinv36277 Davidia involucrata
Duzib133G1263 Durio zibethinus
Duzib138G1321 Durio zibethinus
Duzib138G1331 Durio zibethinus
Duzib268G1022 Durio zibethinus
ECA236G1124 Erigeron canadensis
ECA236G3461 Erigeron canadensis
ECA247G1038 Erigeron canadensis
EL10Ac1g00292 Beta vulgaris
EL10As5g23504 Beta vulgaris
Eucgr.D02365 Eucalyptus grandis
Eucgr.H01057 Eucalyptus grandis
FAN01G1542 Fragaria x ananassa
FAN02G3050 Fragaria x ananassa
FAN03G2640 Fragaria x ananassa
FAN04G1543 Fragaria x ananassa
FAN05G2213 Fragaria x ananassa
FAN05G5680 Fragaria x ananassa
FAN06G0793 Fragaria x ananassa
FAN06G1733 Fragaria x ananassa
FAN08G3390 Fragaria x ananassa
FAN09G3028 Fragaria x ananassa
FAN10G1598 Fragaria x ananassa
FAN10G4223 Fragaria x ananassa
FAN13G1959 Fragaria x ananassa
FAN14G0116 Fragaria x ananassa
FAN18G2454 Fragaria x ananassa
FvH4_5g39470 Fragaria vesca
FvH4_6g10421 Fragaria vesca
FvH4_7g16230 Fragaria vesca
Glyma.02G013700 Glycine max
Glyma.03G218400 Glycine max
Glyma.03G256900 Glycine max
Glyma.07G056800 Glycine max
Glyma.10G014400 Glycine max
Glyma.19G215200 Glycine max
Glyma.19G255100 Glycine max
Gohir.A08G118900 Gossypium hirsutum
Gohir.A10G186000 Gossypium hirsutum
Gohir.A11G096400 Gossypium hirsutum
Gohir.A11G110400 Gossypium hirsutum
Gohir.A12G111600 Gossypium hirsutum
Gohir.D08G139600 Gossypium hirsutum
Gohir.D10G193100 Gossypium hirsutum
Gohir.D10G193150 Gossypium hirsutum
Gohir.D11G101100 Gossypium hirsutum
Gohir.D11G115500 Gossypium hirsutum
Gohir.D12G114900 Gossypium hirsutum
Gorai.004G143700 Gossypium raimondii
Gorai.007G107600 Gossypium raimondii
Gorai.007G123600 Gossypium raimondii
Gorai.008G124400 Gossypium raimondii
Gorai.011G215900 Gossypium raimondii
GSVIVG01027081001 Vitis vinifera
GSVIVG01028099001 Vitis vinifera
HanXRQChr04g0120241 Helianthus annuus
HanXRQChr06g0167811 Helianthus annuus
HanXRQChr06g0170641 Helianthus annuus
HanXRQChr10g0285391 Helianthus annuus
HanXRQChr15g0464201 Helianthus annuus
Haze_05018 Corylus avellana
Haze_05019 Corylus avellana
Haze_15641 Corylus avellana
Hma1.2p1_0212F.1_g090030 Hydrangea macrophylla
Hma1.2p1_1566F.1_g291030 Hydrangea macrophylla
HPP92_009165 Vanilla planifolia
Hund02933 Selenicereus undatus
Hund09617 Selenicereus undatus
Lalb_Chr02g0146711 Lupinus albus
Lalb_Chr06g0166801 Lupinus albus
Lalb_Chr15g0076241 Lupinus albus
Lalb_Chr15g0078321 Lupinus albus
Lalb_Chr15g0078331 Lupinus albus
Lalb_Chr21g0309491 Lupinus albus
Lj1g0008857 Lotus japonicus
Lj1g0017439 Lotus japonicus
Lj2A1204T55 Lonicera japonica
Lj5g0024869 Lotus japonicus
Lj9A596G50 Lonicera japonica
Lj9A596T51 Lonicera japonica
Lsat_1_v5_gn_7_1381 Lactuca sativa
Lsat_1_v5_gn_8_165301 Lactuca sativa
Lsat_1_v5_gn_9_680 Lactuca sativa
Manes.01G226400 Manihot esculenta
Manes.05G002200 Manihot esculenta
Manes.05G024200 Manihot esculenta
Mapoly0043s0139 Marchantia polymorpha
MBI07_g27258_MAGBIO Magnolia biondii
MBI18_g28457_MAGBIO Magnolia biondii
MBI19_g37399_MAGBIO Magnolia biondii
MCO02G283 Micromonas commoda
MD01G1079000 Malus domestica
MD03G1296900 Malus domestica
MD04G1169900 Malus domestica
MD04G1170000 Malus domestica
MD07G1147800 Malus domestica
MD11G1316500 Malus domestica
MD12G1184000 Malus domestica
MD14G1006300 Malus domestica
Medtr1g087330 Medicago truncatula
Medtr7g109350 Medicago truncatula
Medtr7g117280 Medicago truncatula
MELO3C015936.2 Cucumis melo
MELO3C023723.2 Cucumis melo
Migut.D00094 Erythranthe guttata
Migut.N01554 Erythranthe guttata
MSTRG.18112 Avicennia marina
MSTRG.21674 Avicennia marina
MSTRG.4813 Avicennia marina
Nitab4.5_0000838g0070 Nicotiana tabacum
Nitab4.5_0000906g0020 Nicotiana tabacum
Nitab4.5_0001301g0140 Nicotiana tabacum
Nitab4.5_0008279g0060 Nicotiana tabacum
Nn1g01850 Nelumbo nucifera
Nn3g21646 Nelumbo nucifera
Nn4g25638 Nelumbo nucifera
Oeu004942.1 Olea europaea
Oeu005866.2 Olea europaea
Oeu008459.1 Olea europaea
Oeu008684.1 Olea europaea
Oeu014951.1 Olea europaea
Oeu026818.1 Olea europaea
Oeu037977.2 Olea europaea
Oeu047385.1 Olea europaea
Os01g0253900 Oryza sativa ssp. japonica
Os01g0618700 Oryza sativa ssp. japonica
Os01g0675933 Oryza sativa ssp. japonica
Peaxi162Scf00001g00222 Petunia axillaris
Peaxi162Scf00218g00062 Petunia axillaris
Peaxi162Scf00786g00454 Petunia axillaris
PGR031G0992 Punica granatum
PGSC0003DMG400000101 Solanum tuberosum
PGSC0003DMG400009005 Solanum tuberosum
Phvul.001G211900 Phaseolus vulgaris
Phvul.006G112000 Phaseolus vulgaris
Phvul.007G215600 Phaseolus vulgaris
Phvul.010G064500 Phaseolus vulgaris
Phvul.010G112600 Phaseolus vulgaris
Potri.002G169600 Populus trichocarpa
Potri.002G197900 Populus trichocarpa
Potri.014G097200 Populus trichocarpa
Pp3c25_7460 Physcomitrium patens
Pp3c2_530 Physcomitrium patens
Pp3c5_21240 Physcomitrium patens
Pp3c5_23710 Physcomitrium patens
Pp3c9_14130 Physcomitrium patens
PRCOL_00002757 Prasinoderma coloniale
Prupe.2G186100 Prunus persica
Prupe.6G288500 Prunus persica
Prupe.8G270300 Prunus persica
Psat3g002800 Pisum sativum
Psat3g020240 Pisum sativum
Psat6g162480 Pisum sativum
PSO135G0346 Papaver somniferum
PSO170G6496 Papaver somniferum
PSO210G4523 Papaver somniferum
PSO384G1291 Papaver somniferum
PSO761G0026 Papaver somniferum
PSO761G0321 Papaver somniferum
QL04p056579 Quercus lobata
QL12p041614 Quercus lobata
RcHm_v2.0_Chr1g0359261 Rosa chinensis
RcHm_v2.0_Chr3g0461341 Rosa chinensis
RcHm_v2.0_Chr7g0241801 Rosa chinensis
Rhsim07G0005300 Rhododendron simsii
Rhsim13G0006000 Rhododendron simsii
Sabra02G0159700 Salix brachista
Sabra14G0071200 Salix brachista
SalBow2G1781 Salvia bowleyana
SalBow3G1855 Salvia bowleyana
SalBow5G1939 Salvia bowleyana
Sc01g0002810 Simmondsia chinensis
Sc05g0000540 Simmondsia chinensis
Sed0015010 Sechium edule
Sed0015921 Sechium edule
SEGI_07047 Sequoiadendron giganteum
SEGI_07788 Sequoiadendron giganteum
SEGI_08455 Sequoiadendron giganteum
SEGI_09078 Sequoiadendron giganteum
SEGI_19504 Sequoiadendron giganteum
SEGI_23079 Sequoiadendron giganteum
SEGI_34842 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16371 Striga asiatica
SHI19845 Sapria himalayana
SMO232G0047 Selaginella moellendorffii
Solyc01g079600.4 Solanum lycopersicum
Solyc01g095720.3 Solanum lycopersicum
Sopen01g031380 Solanum pennellii
Sopen01g039460 Solanum pennellii
Sp1g01650 Schrenkiella parvula
Sp5g00910 Schrenkiella parvula
Sp5g01710 Schrenkiella parvula
TAR362G0806 Trochodendron aralioides
TAR362G1131 Trochodendron aralioides
TAR629G3321 Trochodendron aralioides
TAR633G1913 Trochodendron aralioides
TAR633G2626 Trochodendron aralioides
TAR636G2954 Trochodendron aralioides
THA.LOC104801300 Tarenaya hassleriana
THA.LOC104825944 Tarenaya hassleriana
THA.LOC104825945 Tarenaya hassleriana
THA.LOC104827627 Tarenaya hassleriana
THA.LOC104827671 Tarenaya hassleriana
Thecc.01G311000 Theobroma cacao
Thecc.01G344400 Theobroma cacao
Thhalv10005828m.g Eutrema salsugineum
Thhalv10005837m.g Eutrema salsugineum
Thhalv10006955m.g Eutrema salsugineum
TPR.G19782 Trifolium pratense
TPR.G4808 Trifolium pratense
TWI18G1106 Tripterygium wilfordii
TWI59G1000 Tripterygium wilfordii
TWI75G1446 Tripterygium wilfordii
vmacro02411 Vaccinium macrocarpon
vmacro23174 Vaccinium macrocarpon
VMungo0540G1400 Vigna mungo
VMungo0720G2928 Vigna mungo
VMungo0828G0001 Vigna mungo
VMungo1383G3258 Vigna mungo
Zm00001eb333620 Zea mays
Zm00001eb353870 Zea mays
Zm00001eb358370 Zea mays

User provided reference genes

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