Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43890 Brassica napus
A03p20910 Brassica napus
A04p16960 Brassica napus
A04p29010 Brassica napus
A06p17080 Brassica napus
A07p15310 Brassica napus
A07p28420 Brassica napus
A08p29110 Brassica napus
A09p08990 Brassica napus
Aa31LG7G14360 Aethionema arabicum
Aa31LG7G5190 Aethionema arabicum
Aa31sc78G20 Aethionema arabicum
Aa31sc88G90 Aethionema arabicum
Actinidia13823 Actinidia chinensis
Actinidia17096 Actinidia chinensis
Actinidia29174 Actinidia chinensis
Ah.02g117170 Amaranthus hybridus
Ah.02g126240 Amaranthus hybridus
Ah.12g056300 Amaranthus hybridus
AL1G34090 Arabidopsis lyrata
AL2G36750 Arabidopsis lyrata
AL4G11960 Arabidopsis lyrata
AL4G34820 Arabidopsis lyrata
AL8G42930 Arabidopsis lyrata
Aqoxy1G00813 Aquilegia oxysepala
Aqoxy5G00939 Aquilegia oxysepala
Aqoxy6G00694 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D22HAB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WYXM7K Arachis hypogaea
AT1G21050 Arabidopsis thaliana
AT1G76610 Arabidopsis thaliana
AT2G22460 Arabidopsis thaliana
AT2G37880 Arabidopsis thaliana
AT5G65340 Arabidopsis thaliana
ATR0449G001 Amborella trichopoda
ATR0605G055 Amborella trichopoda
ATR0733G006 Amborella trichopoda
Atru.chr13.22 Acer truncatum
Atru.chr3.1327 Acer truncatum
Atru.chr8.2079 Acer truncatum
AUR62027196 Chenopodium quinoa
AUR62036864 Chenopodium quinoa
BcaB01g03743 Brassica carinata
BcaB01g03748 Brassica carinata
BcaB02g07070 Brassica carinata
BcaB02g09894 Brassica carinata
BcaB03g12838 Brassica carinata
BcaB03g14283 Brassica carinata
BcaB04g20011 Brassica carinata
BcaB07g32097 Brassica carinata
BcaC01g05587 Brassica carinata
BcaC02g08654 Brassica carinata
BcaC02g08693 Brassica carinata
BcaC03g18329 Brassica carinata
BcaC03g18330 Brassica carinata
BcaC05g26012 Brassica carinata
BcaC05g28245 Brassica carinata
BcaC06g34889 Brassica carinata
BcaC07g39072 Brassica carinata
BcaC08g45517 Brassica carinata
BolC2t12471H Brassica oleracea
BolC3t14854H Brassica oleracea
BolC3t18333H Brassica oleracea
BolC3t18335H Brassica oleracea
BolC4t26745H Brassica oleracea
BolC4t28129H Brassica oleracea
BolC5t30674H Brassica oleracea
BolC6t38314H Brassica oleracea
BolC7t42746H Brassica oleracea
BolC8t49685H Brassica oleracea
BolC9t53946H Brassica oleracea
BraA02t09312Z Brassica rapa
BraA03t11331Z Brassica rapa
BraA04t17326Z Brassica rapa
BraA04t18374Z Brassica rapa
BraA06t24815Z Brassica rapa
BraA07t29269Z Brassica rapa
BraA07t30479Z Brassica rapa
BraA08t34847Z Brassica rapa
BraA09t36550Z Brassica rapa
C02p64050 Brassica napus
C03p24560 Brassica napus
C03p60730 Brassica napus
C03p60740 Brassica napus
C04p51650 Brassica napus
C04p66250 Brassica napus
C05p19740 Brassica napus
C05p42770 Brassica napus
C06p31880 Brassica napus
C07p22490 Brassica napus
C08p20560 Brassica napus
C09p10450 Brassica napus
CAN.G229.36 Capsicum annuum
CAN.G712.12 Capsicum annuum
CAN.G905.2 Capsicum annuum
CANSAT01G0894 Cannabis sativa
CANSAT25G0730 Cannabis sativa
CANSAT35G0644 Cannabis sativa
CARHR021490 Cardamine hirsuta
CARHR070170 Cardamine hirsuta
CARHR113650 Cardamine hirsuta
CARHR132430 Cardamine hirsuta
CARHR279300 Cardamine hirsuta
Carub.0001s2050 Capsella rubella
Carub.0002s2351 Capsella rubella
Carub.0004s0162 Capsella rubella
Carub.0004s1979 Capsella rubella
Carub.0008s2622 Capsella rubella
Ca_16503_v3 Cicer arietinum L.
Ca_30635_v3 Cicer arietinum L.
Cc06_g02150 Coffea canephora
Cc07_g14440 Coffea canephora
CDE02G3071 Ceratophyllum demersum
CDE06G2376 Ceratophyllum demersum
CDE07G0010 Ceratophyllum demersum
CDE11G0832 Ceratophyllum demersum
Cfa014165 Carpinus fangiana
Cfa017309 Carpinus fangiana
Ciclev10001989m.g Citrus clementina
Ciclev10013699m.g Citrus clementina
Ciclev10027358m.g Citrus clementina
CiPaw.01G048800 Carya illinoinensis
CiPaw.02G022500 Carya illinoinensis
CiPaw.07G130300 Carya illinoinensis
CiPaw.08G078900 Carya illinoinensis
CiPaw.09G200300 Carya illinoinensis
ClCG01G018550 Citrullus lanatus
ClCG04G007730 Citrullus lanatus
COL.COLO4_12267 Corchorus olitorius
COL.COLO4_14712 Corchorus olitorius
COL.COLO4_27307 Corchorus olitorius
Cpa.g.sc36.101 Carica papaya
Cpa.g.sc55.61 Carica papaya
Cpa.g.sc56.51 Carica papaya
CsaV3_4G025490 Cucumis sativus L.
CsaV3_6G045200 Cucumis sativus L.
CsaV3_7G023650 Cucumis sativus L.
CSS0005141 Camellia sinensis var. sinensis
DCAR_003458 Daucus carota
DCAR_013356 Daucus carota
DCAR_016929 Daucus carota
DCAR_028777 Daucus carota
Dinv05515 Davidia involucrata
Dinv08877 Davidia involucrata
Dinv37127 Davidia involucrata
Duzib093G0023 Durio zibethinus
Duzib106G2012 Durio zibethinus
Duzib116G0509 Durio zibethinus
Duzib147G0523 Durio zibethinus
Duzib187G0455 Durio zibethinus
ECA233G5476 Erigeron canadensis
ECA236G3548 Erigeron canadensis
EL10Ac5g11595 Beta vulgaris
EL10Ac6g14809 Beta vulgaris
Eucgr.B02722 Eucalyptus grandis
Eucgr.F01952 Eucalyptus grandis
FAN05G2034 Fragaria x ananassa
FAN09G0948 Fragaria x ananassa
FAN14G5121 Fragaria x ananassa
FAN19G0423 Fragaria x ananassa
FAN23G2771 Fragaria x ananassa
FAN26G3276 Fragaria x ananassa
FAN28G0461 Fragaria x ananassa
FvH4_1g20130 Fragaria vesca
FvH4_6g12850 Fragaria vesca
Glyma.05G175200 Glycine max
Glyma.07G138800 Glycine max
Glyma.08G132500 Glycine max
Glyma.11G242700 Glycine max
Glyma.18G014300 Glycine max
Glyma.18G189100 Glycine max
Gohir.A01G101366 Gossypium hirsutum
Gohir.A09G153000 Gossypium hirsutum
Gohir.A10G087250 Gossypium hirsutum
Gohir.A11G206100 Gossypium hirsutum
Gohir.A12G082944 Gossypium hirsutum
Gohir.D01G086400 Gossypium hirsutum
Gohir.D09G148800 Gossypium hirsutum
Gohir.D10G101000 Gossypium hirsutum
Gohir.D11G218500 Gossypium hirsutum
Gohir.D12G081901 Gossypium hirsutum
Gorai.002G112000 Gossypium raimondii
Gorai.006G169800 Gossypium raimondii
Gorai.007G235400 Gossypium raimondii
Gorai.008G091300 Gossypium raimondii
Gorai.011G110700 Gossypium raimondii
GSVIVG01007074001 Vitis vinifera
GSVIVG01013458001 Vitis vinifera
HanXRQChr04g0124551 Helianthus annuus
HanXRQChr06g0177381 Helianthus annuus
HanXRQChr07g0204281 Helianthus annuus
HanXRQChr08g0216511 Helianthus annuus
HanXRQChr14g0444871 Helianthus annuus
Haze_20873 Corylus avellana
Haze_22887 Corylus avellana
Hma1.2p1_1498F.1_g287150 Hydrangea macrophylla
HPP92_019662 Vanilla planifolia
Lalb_Chr03g0042621 Lupinus albus
Lalb_Chr23g0277571 Lupinus albus
Lj1g0017947 Lotus japonicus
Lj2C87T10 Lonicera japonica
Lj4g0002241 Lotus japonicus
Lj4P278T22 Lonicera japonica
Lj6g0004074 Lotus japonicus
Lsat_1_v5_gn_2_65940 Lactuca sativa
Lsat_1_v5_gn_8_25460 Lactuca sativa
Lsat_1_v5_gn_8_84741 Lactuca sativa
Manes.05G136400 Manihot esculenta
Manes.08G086100 Manihot esculenta
Manes.12G129200 Manihot esculenta
Mapoly0007s0004 Marchantia polymorpha
MBI01_g31990_MAGBIO Magnolia biondii
MBI02_g41007_MAGBIO Magnolia biondii
MBI05_g02653_MAGBIO Magnolia biondii
MD04G1137600 Malus domestica
MD12G1152400 Malus domestica
MD15G1317100 Malus domestica
Medtr3g086740 Medicago truncatula
Medtr7g064810 Medicago truncatula
Medtr8g089865 Medicago truncatula
MELO3C003172.2 Cucumis melo
MELO3C007733.2 Cucumis melo
Migut.C00334 Erythranthe guttata
Migut.H02318 Erythranthe guttata
Migut.J00272 Erythranthe guttata
MSTRG.24891 Avicennia marina
Nitab4.5_0000241g0070 Nicotiana tabacum
Nitab4.5_0000362g0090 Nicotiana tabacum
Nitab4.5_0005401g0070 Nicotiana tabacum
Nitab4.5_0006780g0030 Nicotiana tabacum
Nitab4.5_0011665g0010 Nicotiana tabacum
Nn1g02844 Nelumbo nucifera
Nn2g11274 Nelumbo nucifera
Nn5g29973 Nelumbo nucifera
Nn6g31567 Nelumbo nucifera
Oeu000874.1 Olea europaea
Oeu042494.1 Olea europaea
Oeu053777.1 Olea europaea
Peaxi162Scf00044g00177 Petunia axillaris
Peaxi162Scf00044g01722 Petunia axillaris
Peaxi162Scf00237g00061 Petunia axillaris
Peaxi162Scf00318g00024 Petunia axillaris
Peaxi162Scf00569g00021 Petunia axillaris
PGR031G2276 Punica granatum
PGR083G2109 Punica granatum
PGSC0003DMG400016144 Solanum tuberosum
PGSC0003DMG400016789 Solanum tuberosum
PGSC0003DMG400024262 Solanum tuberosum
PGSC0003DMG400042194 Solanum tuberosum
Phvul.001G254500 Phaseolus vulgaris
Phvul.002G260300 Phaseolus vulgaris
Phvul.008G114500 Phaseolus vulgaris
Potri.002G002000 Populus trichocarpa
Potri.005G259300 Populus trichocarpa
Potri.006G091700 Populus trichocarpa
Prupe.6G194800 Prunus persica
Prupe.6G263600 Prunus persica
Psat3g119040 Pisum sativum
Psat3g132920 Pisum sativum
Psat7g058000 Pisum sativum
PSO017G0392 Papaver somniferum
PSO170G6691 Papaver somniferum
PSO339G2033 Papaver somniferum
PSO384G3299 Papaver somniferum
PSO541G3476 Papaver somniferum
PSO541G4957 Papaver somniferum
PSO675G0219 Papaver somniferum
PSO675G4552 Papaver somniferum
PSO675G6088 Papaver somniferum
PSO675G7269 Papaver somniferum
QL02p016266 Quercus lobata
QL06p047864 Quercus lobata
QL07p028539 Quercus lobata
RcHm_v2.0_Chr2g0112181 Rosa chinensis
RcHm_v2.0_Chr3g0464851 Rosa chinensis
Rhsim05G0197100 Rhododendron simsii
Rhsim06G0000900 Rhododendron simsii
Sabra02G0001300 Salix brachista
Sabra05G0200800 Salix brachista
Sabra06G0069300 Salix brachista
SalBow3G1719 Salvia bowleyana
SalBow3G3313 Salvia bowleyana
SalBow7G4143 Salvia bowleyana
Sc01g0004730 Simmondsia chinensis
Sc16g0000390 Simmondsia chinensis
Sed0005469 Sechium edule
Sed0015892 Sechium edule
Sed0016276 Sechium edule
Sed0022596 Sechium edule
SEGI_19347 Sequoiadendron giganteum
SEGI_29892 Sequoiadendron giganteum
SEGI_37913 Sequoiadendron giganteum
SEGI_38279 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26821 Striga asiatica
SMO117G0081 Selaginella moellendorffii
Solyc04g014230.1 Solanum lycopersicum
Solyc05g051440.1 Solanum lycopersicum
Solyc09g011350.3 Solanum lycopersicum
Solyc11g010360.3 Solanum lycopersicum
Sopen04g006330 Solanum pennellii
Sopen05g029860 Solanum pennellii
Sopen09g006070 Solanum pennellii
Sopen11g005140 Solanum pennellii
Sp1g18720 Schrenkiella parvula
Sp4g01470 Schrenkiella parvula
Sp4g20190 Schrenkiella parvula
TAR376G0030 Trochodendron aralioides
TAR381G0405 Trochodendron aralioides
TAR623G0070 Trochodendron aralioides
TAR625G0185 Trochodendron aralioides
TAR628G0954 Trochodendron aralioides
THA.LOC104805624 Tarenaya hassleriana
THA.LOC104807676 Tarenaya hassleriana
THA.LOC104813723 Tarenaya hassleriana
THA.LOC104820150 Tarenaya hassleriana
Thecc.01G094500 Theobroma cacao
Thecc.05G030400 Theobroma cacao
Thecc.08G097800 Theobroma cacao
Thhalv10000305m.g Eutrema salsugineum
Thhalv10005369m.g Eutrema salsugineum
Thhalv10008568m.g Eutrema salsugineum
Thhalv10017650m.g Eutrema salsugineum
Thhalv10019727m.g Eutrema salsugineum
TPR.G27948 Trifolium pratense
TPR.G30539 Trifolium pratense
TPR.G6259 Trifolium pratense
TWI56G1365 Tripterygium wilfordii
TWI74G1143 Tripterygium wilfordii
TWI77G0930 Tripterygium wilfordii
unitig_26.g9111 Utricularia gibba
VMungo0251G0601 Vigna mungo
VMungo1383G0785 Vigna mungo
VMungo1383G2861 Vigna mungo
Zm00001eb227010 Zea mays

User provided reference genes

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