Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31930 Brassica napus
A03p02710 Brassica napus
A03p19790 Brassica napus
A04p07060 Brassica napus
A04p27350 Brassica napus
A05p37630 Brassica napus
A10p29990 Brassica napus
Aa31LG10G7380 Aethionema arabicum
Aa31LG3G5140 Aethionema arabicum
Aa31LG5G21010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1708 Anthoceros agrestis
Actinidia03860 Actinidia chinensis
Actinidia03968 Actinidia chinensis
Actinidia06191 Actinidia chinensis
Actinidia07951 Actinidia chinensis
Actinidia31116 Actinidia chinensis
Actinidia37772 Actinidia chinensis
Ah.08g222250 Amaranthus hybridus
Ah.15g098840 Amaranthus hybridus
AL3G23260 Arabidopsis lyrata
AL4G31970 Arabidopsis lyrata
AL5G33020 Arabidopsis lyrata
AL6G16480 Arabidopsis lyrata
Aqoxy1G00590 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3A37EK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.40BCK9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G490LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5UK0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QG96AP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QT7BNH Arachis hypogaea
AT2G35860 Arabidopsis thaliana
AT3G11700 Arabidopsis thaliana
AT3G52370 Arabidopsis thaliana
AT5G05650 Arabidopsis thaliana
AT5G06390 Arabidopsis thaliana
ATR0697G102 Amborella trichopoda
Atru.chr12.1144 Acer truncatum
Atru.chr12.1145 Acer truncatum
Atru.chr8.1296 Acer truncatum
AUR62001578 Chenopodium quinoa
AUR62020204 Chenopodium quinoa
AUR62030688 Chenopodium quinoa
BcaB01g03874 Brassica carinata
BcaB01g05991 Brassica carinata
BcaB02g08575 Brassica carinata
BcaB04g21122 Brassica carinata
BcaB06g25589 Brassica carinata
BcaB06g28885 Brassica carinata
BcaB06g28886 Brassica carinata
BcaC01g05697 Brassica carinata
BcaC02g07661 Brassica carinata
BcaC02g09263 Brassica carinata
BcaC05g29337 Brassica carinata
BcaC09g48203 Brassica carinata
BolC1t05297H Brassica oleracea
BolC3t12859H Brassica oleracea
BolC3t14710H Brassica oleracea
BolC4t25646H Brassica oleracea
BolC4t27962H Brassica oleracea
BolC5t34285H Brassica oleracea
BolC9t59786H Brassica oleracea
BraA01t03319Z Brassica rapa
BraA01t04166Z Brassica rapa
BraA03t09634Z Brassica rapa
BraA03t11231Z Brassica rapa
BraA04t16403Z Brassica rapa
BraA04t18233Z Brassica rapa
BraA05t22560Z Brassica rapa
BraA10t45039Z Brassica rapa
C03p03140 Brassica napus
C03p23080 Brassica napus
C04p40650 Brassica napus
C04p64860 Brassica napus
C05p56210 Brassica napus
C09p70400 Brassica napus
CAN.G674.22 Capsicum annuum
CAN.G911.8 Capsicum annuum
CANSAT64G0874 Cannabis sativa
CARHR086250 Cardamine hirsuta
CARHR130120 Cardamine hirsuta
CARHR162130 Cardamine hirsuta
CARHR207140 Cardamine hirsuta
Carub.0003s1104 Capsella rubella
Carub.0004s1762 Capsella rubella
Carub.0005s1872 Capsella rubella
Carub.0006s0528 Capsella rubella
Ca_01621_v3 Cicer arietinum L.
Ca_09075_v3 Cicer arietinum L.
Ca_19488_v3 Cicer arietinum L.
CBR_g4398 Chara braunii
Cc06_g06900 Coffea canephora
CDE01G0781 Ceratophyllum demersum
CDE04G2545 Ceratophyllum demersum
CDE05G2886 Ceratophyllum demersum
CDE06G0181 Ceratophyllum demersum
CDE07G0140 Ceratophyllum demersum
CDE07G1384 Ceratophyllum demersum
Cfa006604 Carpinus fangiana
Cfa010214 Carpinus fangiana
Cfa010493 Carpinus fangiana
Cfa014383 Carpinus fangiana
Cfa020077 Carpinus fangiana
Cfa026839 Carpinus fangiana
Ciclev10011703m.g Citrus clementina
Ciclev10015097m.g Citrus clementina
Ciclev10030024m.g Citrus clementina
CiPaw.09G023400 Carya illinoinensis
CiPaw.10G020100 Carya illinoinensis
CiPaw.10G020300 Carya illinoinensis
CiPaw.13G045800 Carya illinoinensis
CiPaw.14G036500 Carya illinoinensis
ClCG02G022530 Citrullus lanatus
ClCG03G012400 Citrullus lanatus
ClCG10G018050 Citrullus lanatus
COL.COLO4_05920 Corchorus olitorius
COL.COLO4_29511 Corchorus olitorius
Cpa.g.sc222.22 Carica papaya
Cpa.g.sc33.120 Carica papaya
CsaV3_1G043610 Cucumis sativus L.
CsaV3_3G038250 Cucumis sativus L.
CSS0015010 Camellia sinensis var. sinensis
CSS0043533 Camellia sinensis var. sinensis
DCAR_009074 Daucus carota
DCAR_013456 Daucus carota
DCAR_020682 Daucus carota
Dinv06463 Davidia involucrata
Dinv11889 Davidia involucrata
Dinv18864 Davidia involucrata
Dinv21733 Davidia involucrata
Dinv25070 Davidia involucrata
Dinv30116 Davidia involucrata
Duzib093G0650 Durio zibethinus
Duzib106G0415 Durio zibethinus
Duzib106G1225 Durio zibethinus
Duzib128G1430 Durio zibethinus
ECA232G1144 Erigeron canadensis
ECA233G5695 Erigeron canadensis
ECA238G1372 Erigeron canadensis
ECA238G3611 Erigeron canadensis
ECA248G0318 Erigeron canadensis
EL10Ac5g11819 Beta vulgaris
EL10Ac7g16267 Beta vulgaris
Eucgr.A02551 Eucalyptus grandis
Eucgr.B03801 Eucalyptus grandis
FAN02G3416 Fragaria x ananassa
FAN05G1736 Fragaria x ananassa
FAN05G5427 Fragaria x ananassa
FAN09G3156 Fragaria x ananassa
FAN11G3704 Fragaria x ananassa
FAN14G3547 Fragaria x ananassa
FAN16G1427 Fragaria x ananassa
FAN21G1861 Fragaria x ananassa
FAN25G0719 Fragaria x ananassa
FAN25G0904 Fragaria x ananassa
FvH4_3g26750 Fragaria vesca
FvH4_6g20860 Fragaria vesca
Glyma.03G204300 Glycine max
Glyma.06G308600 Glycine max
Glyma.12G096300 Glycine max
Glyma.12G190700 Glycine max
Glyma.13G311000 Glycine max
Glyma.19G201600 Glycine max
Gohir.A09G132500 Gossypium hirsutum
Gohir.A10G196400 Gossypium hirsutum
Gohir.A13G003400 Gossypium hirsutum
Gohir.D09G128800 Gossypium hirsutum
Gohir.D10G203500 Gossypium hirsutum
Gohir.D13G003300 Gossypium hirsutum
Gorai.006G147500 Gossypium raimondii
Gorai.011G228300 Gossypium raimondii
Gorai.013G003200 Gossypium raimondii
GSVIVG01022545001 Vitis vinifera
GSVIVG01022548001 Vitis vinifera
HanXRQChr02g0052891 Helianthus annuus
HanXRQChr07g0194521 Helianthus annuus
HanXRQChr07g0196591 Helianthus annuus
HanXRQChr07g0196601 Helianthus annuus
HanXRQChr11g0347571 Helianthus annuus
HanXRQChr14g0453271 Helianthus annuus
HanXRQChr14g0455481 Helianthus annuus
Haze_03428 Corylus avellana
Haze_20114 Corylus avellana
Haze_23599 Corylus avellana
Hma1.2p1_0101F.1_g049720 Hydrangea macrophylla
Hma1.2p1_0401F.1_g144770 Hydrangea macrophylla
Hma1.2p1_0969F.1_g242580 Hydrangea macrophylla
HPP92_018631 Vanilla planifolia
HPP92_019540 Vanilla planifolia
Hund10829 Selenicereus undatus
Hund18810 Selenicereus undatus
Hund20963 Selenicereus undatus
Lalb_Chr01g0017761 Lupinus albus
Lalb_Chr03g0028551 Lupinus albus
Lalb_Chr09g0332271 Lupinus albus
Lalb_Chr19g0136121 Lupinus albus
Lalb_Chr25g0287881 Lupinus albus
Lj1g0015256 Lotus japonicus
Lj2C37G5 Lonicera japonica
Lj2C37T11 Lonicera japonica
Lj3g0001205 Lotus japonicus
Lj3g0013574 Lotus japonicus
Lsat_1_v5_gn_0_21000 Lactuca sativa
Lsat_1_v5_gn_1_58621 Lactuca sativa
Lsat_1_v5_gn_2_101821 Lactuca sativa
Lsat_1_v5_gn_2_106361 Lactuca sativa
Lsat_1_v5_gn_6_34600 Lactuca sativa
Lsat_1_v5_gn_7_98740 Lactuca sativa
Manes.08G036500 Manihot esculenta
Manes.09G042500 Manihot esculenta
Mapoly0097s0014 Marchantia polymorpha
MBI05_g28090_MAGBIO Magnolia biondii
MBI11_g46654_MAGBIO Magnolia biondii
MD12G1044800 Malus domestica
MD14G1043600 Malus domestica
Medtr2g087810 Medicago truncatula
Medtr4g050170 Medicago truncatula
Medtr7g106760 Medicago truncatula
MELO3C009567.2 Cucumis melo
MELO3C015093.2 Cucumis melo
Migut.F00827 Erythranthe guttata
Migut.J00736 Erythranthe guttata
Migut.L01848 Erythranthe guttata
MSTRG.10416 Avicennia marina
MSTRG.19327 Avicennia marina
MSTRG.26586 Avicennia marina
MSTRG.5913 Avicennia marina
Nitab4.5_0000721g0130 Nicotiana tabacum
Nitab4.5_0001805g0030 Nicotiana tabacum
Nitab4.5_0001918g0100 Nicotiana tabacum
Nitab4.5_0002417g0020 Nicotiana tabacum
Nn2g14400 Nelumbo nucifera
Nn2g14401 Nelumbo nucifera
Nn6g33891 Nelumbo nucifera
Nn6g34595 Nelumbo nucifera
Oeu009255.1 Olea europaea
Oeu020163.1 Olea europaea
Oeu033263.1 Olea europaea
Oeu035665.1 Olea europaea
Oeu045020.1 Olea europaea
Oeu058125.1 Olea europaea
Oeu063085.1 Olea europaea
Os03g0788600 Oryza sativa ssp. japonica
Os03g0788700 Oryza sativa ssp. japonica
Os07g0160600 Oryza sativa ssp. japonica
Peaxi162Scf00203g00081 Petunia axillaris
Peaxi162Scf00687g00041 Petunia axillaris
PGR004G1936 Punica granatum
PGR044G1393 Punica granatum
PGR102G2404 Punica granatum
PGR142G2240 Punica granatum
PGSC0003DMG400021372 Solanum tuberosum
PGSC0003DMG400028137 Solanum tuberosum
Phvul.001G197900 Phaseolus vulgaris
Phvul.005G117500 Phaseolus vulgaris
Phvul.011G100600 Phaseolus vulgaris
Potri.006G200300 Populus trichocarpa
Potri.008G012400 Populus trichocarpa
Potri.010G198250 Populus trichocarpa
Potri.010G244900 Populus trichocarpa
Potri.012G006200 Populus trichocarpa
Potri.016G066500 Populus trichocarpa
Potri.019G008400 Populus trichocarpa
Pp3c16_8540 Physcomitrium patens
Pp3c25_5850 Physcomitrium patens
Prupe.7G090600 Prunus persica
Psat3g027960 Pisum sativum
Psat5g262880 Pisum sativum
Psat7g203520 Pisum sativum
PSO339G4326 Papaver somniferum
PSO339G4515 Papaver somniferum
PSO339G4958 Papaver somniferum
PSO384G3173 Papaver somniferum
PSO384G3748 Papaver somniferum
PSO384G4034 Papaver somniferum
QL01p019065 Quercus lobata
QL07p026710 Quercus lobata
QL07p038122 Quercus lobata
RcHm_v2.0_Chr3g0477211 Rosa chinensis
RcHm_v2.0_Chr5g0049181 Rosa chinensis
RcHm_v2.0_Chr6g0303021 Rosa chinensis
Rhsim03G0063000 Rhododendron simsii
Rhsim09G0140100 Rhododendron simsii
Sabra06G0154200 Salix brachista
Sabra08G0007700 Salix brachista
Sabra10G0191400 Salix brachista
Sabra16G0067900 Salix brachista
SalBow5G4003 Salvia bowleyana
SalBow6G4219 Salvia bowleyana
Sc06g0008620 Simmondsia chinensis
Sc12g0000420 Simmondsia chinensis
Sed0009714 Sechium edule
Sed0011645 Sechium edule
Sed0013711 Sechium edule
Sed0022696 Sechium edule
Sed0023603 Sechium edule
SEGI_11578 Sequoiadendron giganteum
SEGI_35493 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12823 Striga asiatica
SGA_v2.0_scaffold392G50680 Striga asiatica
SHI28315 Sapria himalayana
SMO143G0148 Selaginella moellendorffii
SMO356G0520 Selaginella moellendorffii
Solyc10g081720.2 Solanum lycopersicum
Sopen01g002810 Solanum pennellii
Sopen10g032230 Solanum pennellii
Sp3g09930 Schrenkiella parvula
Sp4g18120 Schrenkiella parvula
Sp5g09920 Schrenkiella parvula
Sp6g36460 Schrenkiella parvula
TAR369G0353 Trochodendron aralioides
TAR369G0969 Trochodendron aralioides
TAR623G1680 Trochodendron aralioides
TAR633G2778 Trochodendron aralioides
THA.LOC104803548 Tarenaya hassleriana
THA.LOC104809948 Tarenaya hassleriana
THA.LOC104816626 Tarenaya hassleriana
THA.LOC104823511 Tarenaya hassleriana
THA.LOC104826800 Tarenaya hassleriana
Thecc.05G109000 Theobroma cacao
Thecc.10G119900 Theobroma cacao
Thhalv10010381m.g Eutrema salsugineum
Thhalv10013481m.g Eutrema salsugineum
Thhalv10016656m.g Eutrema salsugineum
Thhalv10020679m.g Eutrema salsugineum
TPR.G34445 Trifolium pratense
TPR.G4217 Trifolium pratense
TWI53G1332 Tripterygium wilfordii
TWI74G0692 Tripterygium wilfordii
TWI77G0274 Tripterygium wilfordii
unitig_22.g5982 Utricularia gibba
unitig_578.g16352 Utricularia gibba
unitig_578.g16353 Utricularia gibba
unitig_8.g4736 Utricularia gibba
vmacro07491 Vaccinium macrocarpon
vmacro10302 Vaccinium macrocarpon
vmacro10335 Vaccinium macrocarpon
VMungo0251G0511 Vigna mungo
VMungo1080G1748 Vigna mungo
VMungo1127G0032 Vigna mungo
VMungo1383G2066 Vigna mungo
Zm00001eb060130 Zea mays
Zm00001eb213260 Zea mays

User provided reference genes

Program Settings