Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p16690 Brassica napus
Aa31LG2G9140 Aethionema arabicum
Aa31LG2G9150 Aethionema arabicum
Actinidia11826 Actinidia chinensis
Actinidia11827 Actinidia chinensis
Actinidia11828 Actinidia chinensis
Actinidia11829 Actinidia chinensis
Actinidia24045 Actinidia chinensis
Ah.09g237070 Amaranthus hybridus
Ah.09g237080 Amaranthus hybridus
Ah.09g237090 Amaranthus hybridus
AL2G14500 Arabidopsis lyrata
Aqoxy4G01898 Aquilegia oxysepala
Aqoxy4G01900 Aquilegia oxysepala
Aqoxy4G01901 Aquilegia oxysepala
Aqoxy4G01904 Aquilegia oxysepala
Aqoxy4G01916 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95ZZMZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CSS19L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYN48E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FXE6GW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GA9KAJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GV0VBM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IF1UXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q0W2B6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4BNGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWY61J Arachis hypogaea
AT1G61680 Arabidopsis thaliana
ATR0804G017 Amborella trichopoda
ATR0804G021 Amborella trichopoda
ATR0804G022 Amborella trichopoda
ATR0804G039 Amborella trichopoda
Atru.chr6.3110 Acer truncatum
AUR62012567 Chenopodium quinoa
AUR62012569 Chenopodium quinoa
AUR62012570 Chenopodium quinoa
AUR62014628 Chenopodium quinoa
AUR62014629 Chenopodium quinoa
AUR62014632 Chenopodium quinoa
AUR62014633 Chenopodium quinoa
AUR62014634 Chenopodium quinoa
AUR62044185 Chenopodium quinoa
AUR62044384 Chenopodium quinoa
BcaC04g22345 Brassica carinata
BolC9t54935H Brassica oleracea
BraA09t37307Z Brassica rapa
C09p20310 Brassica napus
CAN.G1174.1 Capsicum annuum
CAN.G132.22 Capsicum annuum
CANSAT56G2181 Cannabis sativa
CANSAT56G3973 Cannabis sativa
Carub.0002s0347 Capsella rubella
Ca_18456_v3 Cicer arietinum L.
Cc02_g11870 Coffea canephora
Cfa000281 Carpinus fangiana
Cfa000282 Carpinus fangiana
Ciclev10004558m.g Citrus clementina
Ciclev10014632m.g Citrus clementina
Ciclev10014707m.g Citrus clementina
CiPaw.07G072900 Carya illinoinensis
CiPaw.07G073000 Carya illinoinensis
CiPaw.09G152900 Carya illinoinensis
CiPaw.09G153100 Carya illinoinensis
CiPaw.09G153200 Carya illinoinensis
CiPaw.09G153300 Carya illinoinensis
CiPaw.09G153400 Carya illinoinensis
CiPaw.09G153500 Carya illinoinensis
CiPaw.09G153600 Carya illinoinensis
CiPaw.10G113300 Carya illinoinensis
CiPaw.10G113400 Carya illinoinensis
ClCG03G005200 Citrullus lanatus
ClCG03G005210 Citrullus lanatus
ClCG03G005230 Citrullus lanatus
ClCG03G005240 Citrullus lanatus
COL.COLO4_13672 Corchorus olitorius
COL.COLO4_14081 Corchorus olitorius
COL.COLO4_31674 Corchorus olitorius
CsaV3_1G011400 Cucumis sativus L.
CsaV3_1G011410 Cucumis sativus L.
CsaV3_1G011420 Cucumis sativus L.
CsaV3_1G011430 Cucumis sativus L.
CsaV3_1G011440 Cucumis sativus L.
CSS0000049 Camellia sinensis var. sinensis
CSS0000223 Camellia sinensis var. sinensis
CSS0012706 Camellia sinensis var. sinensis
CSS0013839 Camellia sinensis var. sinensis
CSS0015676 Camellia sinensis var. sinensis
CSS0031334 Camellia sinensis var. sinensis
CSS0040027 Camellia sinensis var. sinensis
CSS0045257 Camellia sinensis var. sinensis
DCAR_002829 Daucus carota
DCAR_002830 Daucus carota
DCAR_002831 Daucus carota
DCAR_024752 Daucus carota
DCAR_024753 Daucus carota
DCAR_024754 Daucus carota
DCAR_031915 Daucus carota
Dinv17856 Davidia involucrata
Duzib192G1015 Durio zibethinus
Duzib235G0134 Durio zibethinus
ECA233G2239 Erigeron canadensis
ECA234G0280 Erigeron canadensis
EL10As6g23674 Beta vulgaris
EL10As6g23675 Beta vulgaris
EL10As6g23677 Beta vulgaris
EL10As6g23679 Beta vulgaris
Eucgr.E03062 Eucalyptus grandis
Eucgr.E03562 Eucalyptus grandis
Eucgr.E03566 Eucalyptus grandis
Eucgr.E03569 Eucalyptus grandis
Eucgr.E03570 Eucalyptus grandis
Eucgr.E03571 Eucalyptus grandis
Eucgr.E03572 Eucalyptus grandis
Eucgr.E03574 Eucalyptus grandis
Eucgr.E03598 Eucalyptus grandis
Eucgr.E03602 Eucalyptus grandis
Eucgr.E03603 Eucalyptus grandis
Eucgr.E03605 Eucalyptus grandis
Eucgr.E03606 Eucalyptus grandis
Eucgr.E03610 Eucalyptus grandis
Eucgr.L02261 Eucalyptus grandis
Eucgr.L03091 Eucalyptus grandis
FAN21G0031 Fragaria x ananassa
FAN21G1501 Fragaria x ananassa
FAN25G2201 Fragaria x ananassa
FvH4_3g03042 Fragaria vesca
FvH4_3g03045 Fragaria vesca
FvH4_3g03061 Fragaria vesca
FvH4_3g03072 Fragaria vesca
FvH4_3g03081 Fragaria vesca
FvH4_3g03150 Fragaria vesca
Glyma.07G187600 Glycine max
Glyma.07G187700 Glycine max
Glyma.08G061550 Glycine max
Glyma.08G061600 Glycine max
Glyma.13G250400 Glycine max
Glyma.13G304500 Glycine max
Gohir.A10G017500 Gossypium hirsutum
Gohir.D10G017650 Gossypium hirsutum
Gohir.D10G017700 Gossypium hirsutum
Gorai.011G019700 Gossypium raimondii
GSVIVG01000410001 Vitis vinifera
GSVIVG01000414001 Vitis vinifera
GSVIVG01002718001 Vitis vinifera
GSVIVG01005217001 Vitis vinifera
GSVIVG01005218001 Vitis vinifera
GSVIVG01005220001 Vitis vinifera
GSVIVG01005221001 Vitis vinifera
GSVIVG01005268001 Vitis vinifera
GSVIVG01005271001 Vitis vinifera
GSVIVG01005272001 Vitis vinifera
GSVIVG01006465001 Vitis vinifera
GSVIVG01006466001 Vitis vinifera
GSVIVG01006467001 Vitis vinifera
GSVIVG01006468001 Vitis vinifera
GSVIVG01006469001 Vitis vinifera
GSVIVG01006589001 Vitis vinifera
GSVIVG01006591001 Vitis vinifera
GSVIVG01007468001 Vitis vinifera
HanXRQChr10g0285221 Helianthus annuus
HanXRQChr11g0328241 Helianthus annuus
HanXRQChr11g0328261 Helianthus annuus
HanXRQChr11g0328271 Helianthus annuus
HanXRQChr14g0431391 Helianthus annuus
HanXRQChr16g0516441 Helianthus annuus
HanXRQChr16g0516461 Helianthus annuus
HanXRQChr16g0517061 Helianthus annuus
Haze_06657 Corylus avellana
Haze_06659 Corylus avellana
Haze_06660 Corylus avellana
Haze_06661 Corylus avellana
Hma1.2p1_0033F.1_g021040 Hydrangea macrophylla
Hma1.2p1_0809F.1_g221790 Hydrangea macrophylla
Hma1.2p1_2294F.1_g319140 Hydrangea macrophylla
HPP92_023577 Vanilla planifolia
HPP92_023579 Vanilla planifolia
HPP92_023582 Vanilla planifolia
HPP92_023584 Vanilla planifolia
HPP92_023586 Vanilla planifolia
Lalb_Chr20g0122571 Lupinus albus
Lj1A1220T16 Lonicera japonica
Lj1A1220T17 Lonicera japonica
Lj1A748T30 Lonicera japonica
Lj2g0010391 Lotus japonicus
Lj4g0024885 Lotus japonicus
Lj5g0001152 Lotus japonicus
Lj6A301T10 Lonicera japonica
Lj6A313T17 Lonicera japonica
Lj6C302T4 Lonicera japonica
Lj6C313G3 Lonicera japonica
Lj6g0011316 Lotus japonicus
Lj8A121T29 Lonicera japonica
Lsat_1_v5_gn_4_170740 Lactuca sativa
Lsat_1_v5_gn_4_58141 Lactuca sativa
Lsat_1_v5_gn_4_58221 Lactuca sativa
Manes.16G016100 Manihot esculenta
Manes.16G016200 Manihot esculenta
Manes.16G016300 Manihot esculenta
Manes.17G030605 Manihot esculenta
Manes.17G030610 Manihot esculenta
MBI18_g20997_MAGBIO Magnolia biondii
MBI18_g25925_MAGBIO Magnolia biondii
MBI18_g38012_MAGBIO Magnolia biondii
MD05G1334800 Malus domestica
MD05G1335100 Malus domestica
MD10G1309700 Malus domestica
MD10G1309900 Malus domestica
MD10G1310200 Malus domestica
MD10G1310500 Malus domestica
MD10G1310600 Malus domestica
Medtr0927s0010 Medicago truncatula
Medtr2g010940 Medicago truncatula
Medtr2g010960 Medicago truncatula
Medtr3g052120 Medicago truncatula
Medtr3g063120 Medicago truncatula
Medtr3g063140 Medicago truncatula
Medtr3g063160 Medicago truncatula
Medtr3g063170 Medicago truncatula
Medtr3g465090 Medicago truncatula
Medtr4g092010 Medicago truncatula
Medtr4g092020 Medicago truncatula
Medtr4g094020 Medicago truncatula
Medtr6g064980 Medicago truncatula
Medtr6g065040 Medicago truncatula
MELO3C002516.2 Cucumis melo
MELO3C002517.2 Cucumis melo
MELO3C002520.2 Cucumis melo
MELO3C035526.2 Cucumis melo
Migut.H01541 Erythranthe guttata
Migut.H01543 Erythranthe guttata
Migut.H01545 Erythranthe guttata
MSTRG.14652 Avicennia marina
Nitab4.5_0003738g0070 Nicotiana tabacum
Nn7g36845 Nelumbo nucifera
Oeu050540.2 Olea europaea
Oeu050541.1 Olea europaea
Oeu050545.1 Olea europaea
Oeu050547.1 Olea europaea
Oeu050548.1 Olea europaea
Oeu050553.1 Olea europaea
Oeu050556.1 Olea europaea
Oeu050560.1 Olea europaea
Oeu050562.1 Olea europaea
Oeu050565.1 Olea europaea
Oeu050566.1 Olea europaea
Oeu050567.1 Olea europaea
Oeu050569.1 Olea europaea
Oeu052915.2 Olea europaea
Os02g0121700 Oryza sativa ssp. japonica
Os10g0489500 Oryza sativa ssp. japonica
Peaxi162Scf00678g00067 Petunia axillaris
PGR042G0293 Punica granatum
PGR042G0552 Punica granatum
PGR042G0909 Punica granatum
PGR042G0981 Punica granatum
PGR042G1678 Punica granatum
PGSC0003DMG400011279 Solanum tuberosum
PGSC0003DMG401011252 Solanum tuberosum
PGSC0003DMG402011252 Solanum tuberosum
PGSC0003DMG403011252 Solanum tuberosum
Phvul.002G219100 Phaseolus vulgaris
Phvul.002G219200 Phaseolus vulgaris
Phvul.002G219300 Phaseolus vulgaris
Phvul.006G195600 Phaseolus vulgaris
Phvul.006G195700 Phaseolus vulgaris
Potri.004G030200 Populus trichocarpa
Potri.004G030400 Populus trichocarpa
Potri.011G032300 Populus trichocarpa
Prupe.4G030300 Prunus persica
Prupe.4G030400 Prunus persica
Psat0s2564g0080 Pisum sativum
Psat1g210800 Pisum sativum
Psat7g105920 Pisum sativum
Psat7g105960 Pisum sativum
Psat7g106840 Pisum sativum
QL05p077442 Quercus lobata
QL05p077471 Quercus lobata
QL05p077515 Quercus lobata
QL05p077679 Quercus lobata
QL05p077779 Quercus lobata
QL05p077796 Quercus lobata
QL05p078196 Quercus lobata
RcHm_v2.0_Chr5g0004711 Rosa chinensis
RcHm_v2.0_Chr5g0004731 Rosa chinensis
RcHm_v2.0_Chr5g0004761 Rosa chinensis
RcHm_v2.0_Chr5g0004801 Rosa chinensis
RcHm_v2.0_Chr5g0037511 Rosa chinensis
RcHm_v2.0_Chr5g0037521 Rosa chinensis
Rhsim02G0115800 Rhododendron simsii
Rhsim02G0116000 Rhododendron simsii
Rhsim02G0116300 Rhododendron simsii
Rhsim04G0060000 Rhododendron simsii
RhsimUnG0243000 Rhododendron simsii
Sabra04G0017200 Salix brachista
SalBow7G0910 Salvia bowleyana
SalBow7G4083 Salvia bowleyana
SalBow8G4960 Salvia bowleyana
Sc17g0006890 Simmondsia chinensis
Sc19g0001840 Simmondsia chinensis
Sed0003991 Sechium edule
Sed0007829 Sechium edule
Sed0011923 Sechium edule
Sed0016025 Sechium edule
Sed0025437 Sechium edule
SGA_v2.0_scaffold153G37042 Striga asiatica
SGA_v2.0_scaffold159G37710 Striga asiatica
Solyc05g026590.2 Solanum lycopersicum
Solyc05g026600.3 Solanum lycopersicum
Solyc05g026603.1 Solanum lycopersicum
Solyc10g005390.4 Solanum lycopersicum
Solyc10g005410.4 Solanum lycopersicum
Solyc10g005420.1 Solanum lycopersicum
Sopen05g024370 Solanum pennellii
Sopen10g001380 Solanum pennellii
Sopen10g001400 Solanum pennellii
TAR591G0002 Trochodendron aralioides
TAR591G0005 Trochodendron aralioides
TAR627G0280 Trochodendron aralioides
TAR627G0794 Trochodendron aralioides
TAR627G1062 Trochodendron aralioides
TAR629G0040 Trochodendron aralioides
TAR629G1681 Trochodendron aralioides
TAR629G2139 Trochodendron aralioides
TAR629G3492 Trochodendron aralioides
THA.LOC104809526 Tarenaya hassleriana
THA.LOC104809528 Tarenaya hassleriana
THA.LOC104818931 Tarenaya hassleriana
THA.LOC104818943 Tarenaya hassleriana
Thecc.06G206600 Theobroma cacao
Thecc.06G206700 Theobroma cacao
Thecc.06G206800 Theobroma cacao
Thecc.06G206900 Theobroma cacao
Thecc.06G207000 Theobroma cacao
TPR.G13910 Trifolium pratense
TPR.G13922 Trifolium pratense
TPR.G13924 Trifolium pratense
TPR.G32635 Trifolium pratense
TPR.G33797 Trifolium pratense
TPR.G36191 Trifolium pratense
TPR.G7100 Trifolium pratense
TWI38G0514 Tripterygium wilfordii
TWI38G1089 Tripterygium wilfordii
vmacro03742 Vaccinium macrocarpon
vmacro15845 Vaccinium macrocarpon
VMungo0251G2114 Vigna mungo
VMungo0251G2479 Vigna mungo
VMungo0540G1501 Vigna mungo
VMungo0540G1835 Vigna mungo
Zm00001eb208380 Zea mays
Zm00001eb208400 Zea mays
Zm00001eb230410 Zea mays
Zm00001eb230440 Zea mays

User provided reference genes

Program Settings