Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31850 Brassica napus
A02p22290 Brassica napus
A03p18870 Brassica napus
A05p11880 Brassica napus
Aa31LG1G5160 Aethionema arabicum
Actinidia07161 Actinidia chinensis
Actinidia31709 Actinidia chinensis
AL2G39040 Arabidopsis lyrata
AL2G39050 Arabidopsis lyrata
AL4G29400 Arabidopsis lyrata
AL5G19040 Arabidopsis lyrata
AL6G50050 Arabidopsis lyrata
Aqoxy2G00996 Aquilegia oxysepala
Aqoxy2G01010 Aquilegia oxysepala
Aqoxy2G02865 Aquilegia oxysepala
Aqoxy4G02501 Aquilegia oxysepala
Aqoxy5G03280 Aquilegia oxysepala
Aqoxy5G03281 Aquilegia oxysepala
Aqoxy5G03283 Aquilegia oxysepala
Aqoxy7G00320 Aquilegia oxysepala
Aqoxy7G00330 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GE1X0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE7EYC Arachis hypogaea
AT1G78635 Arabidopsis thaliana
AT1G78640 Arabidopsis thaliana
AT2G33720 Arabidopsis thaliana
AT4G02870 Arabidopsis thaliana
Atru.chr1.3164 Acer truncatum
Atru.chr1.3165 Acer truncatum
Atru.chr1.393 Acer truncatum
Atru.chr1.395 Acer truncatum
BcaB01g03921 Brassica carinata
BcaB04g21444 Brassica carinata
BcaB05g25150 Brassica carinata
BcaC01g03293 Brassica carinata
BcaC01g05828 Brassica carinata
BcaC02g11447 Brassica carinata
BcaC03g15829 Brassica carinata
BcaC09g47837 Brassica carinata
BolC1t05688H Brassica oleracea
BolC2t09589H Brassica oleracea
BolC3t14584H Brassica oleracea
BolC4t23116H Brassica oleracea
BraA01t03310Z Brassica rapa
BraA01t04478Z Brassica rapa
BraA02t07234Z Brassica rapa
BraA03t11147Z Brassica rapa
BraA05t20129Z Brassica rapa
C02p35710 Brassica napus
C03p22010 Brassica napus
C03p54800 Brassica napus
C04p15450 Brassica napus
CAN.G1427.1 Capsicum annuum
CAN.G1427.2 Capsicum annuum
CANSAT54G2127 Cannabis sativa
CARHR072160 Cardamine hirsuta
CARHR072170 Cardamine hirsuta
CARHR079970 Cardamine hirsuta
Carub.0002s2549 Capsella rubella
Carub.0003s0487 Capsella rubella
Carub.0004s1534 Capsella rubella
Carub.0004s1535 Capsella rubella
Ca_02696_v3 Cicer arietinum L.
Ca_11842_v3 Cicer arietinum L.
Ca_11853_v3 Cicer arietinum L.
Ca_18141_v3 Cicer arietinum L.
Cfa000346 Carpinus fangiana
Cfa010546 Carpinus fangiana
Cfa010548 Carpinus fangiana
Cfa011927 Carpinus fangiana
Cfa012186 Carpinus fangiana
Cfa012228 Carpinus fangiana
Cfa012230 Carpinus fangiana
Cfa012233 Carpinus fangiana
Cfa016920 Carpinus fangiana
Ciclev10006716m.g Citrus clementina
Ciclev10006773m.g Citrus clementina
Ciclev10006908m.g Citrus clementina
CiPaw.04G131800 Carya illinoinensis
CiPaw.04G131900 Carya illinoinensis
CiPaw.11G135200 Carya illinoinensis
CiPaw.12G093100 Carya illinoinensis
COL.COLO4_05119 Corchorus olitorius
COL.COLO4_10852 Corchorus olitorius
COL.COLO4_24578 Corchorus olitorius
COL.COLO4_29538 Corchorus olitorius
Cpa.g.sc28.53 Carica papaya
Cpa.g.sc3630.1 Carica papaya
Cpa.g.sc85.9 Carica papaya
CSS0035206 Camellia sinensis var. sinensis
DCAR_001694 Daucus carota
DCAR_004637 Daucus carota
DCAR_004639 Daucus carota
DCAR_004641 Daucus carota
DCAR_021926 Daucus carota
DCAR_021927 Daucus carota
DCAR_022505 Daucus carota
DCAR_022506 Daucus carota
DCAR_022508 Daucus carota
DCAR_022509 Daucus carota
DCAR_031897 Daucus carota
Dinv16366 Davidia involucrata
Dinv16367 Davidia involucrata
Dinv37640 Davidia involucrata
Dinv38938 Davidia involucrata
Dinv38941 Davidia involucrata
Duzib187G1730 Durio zibethinus
Duzib264G0350 Durio zibethinus
Duzib264G0415 Durio zibethinus
Duzib264G0660 Durio zibethinus
Duzib268G1296 Durio zibethinus
Eucgr.E01923 Eucalyptus grandis
Eucgr.E01933 Eucalyptus grandis
Eucgr.E01934 Eucalyptus grandis
Eucgr.E01937 Eucalyptus grandis
Eucgr.E01938 Eucalyptus grandis
Eucgr.E01939 Eucalyptus grandis
Eucgr.E01941 Eucalyptus grandis
Eucgr.E01943 Eucalyptus grandis
Eucgr.E01944 Eucalyptus grandis
Eucgr.E01947 Eucalyptus grandis
Eucgr.E01948 Eucalyptus grandis
Eucgr.E02013 Eucalyptus grandis
Eucgr.E02029 Eucalyptus grandis
Eucgr.E02039 Eucalyptus grandis
Eucgr.E02043 Eucalyptus grandis
Eucgr.E02044 Eucalyptus grandis
Eucgr.E02045 Eucalyptus grandis
Eucgr.E02046 Eucalyptus grandis
Eucgr.E02047 Eucalyptus grandis
Eucgr.E02048 Eucalyptus grandis
Eucgr.E02050 Eucalyptus grandis
Eucgr.E02051 Eucalyptus grandis
Eucgr.E02053 Eucalyptus grandis
Eucgr.E02054 Eucalyptus grandis
Eucgr.E02057 Eucalyptus grandis
Eucgr.E02060 Eucalyptus grandis
Eucgr.E02074 Eucalyptus grandis
Eucgr.E02075 Eucalyptus grandis
Eucgr.E02078 Eucalyptus grandis
Eucgr.E02109 Eucalyptus grandis
Eucgr.E02114 Eucalyptus grandis
Eucgr.E02128 Eucalyptus grandis
Eucgr.E02134 Eucalyptus grandis
Eucgr.E04365 Eucalyptus grandis
Eucgr.E04371 Eucalyptus grandis
Eucgr.E04373 Eucalyptus grandis
Eucgr.L01801 Eucalyptus grandis
Eucgr.L01802 Eucalyptus grandis
Eucgr.L02104 Eucalyptus grandis
Eucgr.L03694 Eucalyptus grandis
FAN03G0160 Fragaria x ananassa
FAN06G2508 Fragaria x ananassa
FAN06G2933 Fragaria x ananassa
FAN10G1596 Fragaria x ananassa
FAN10G3735 Fragaria x ananassa
FAN11G3165 Fragaria x ananassa
FAN11G3424 Fragaria x ananassa
FAN16G0125 Fragaria x ananassa
FAN19G2268 Fragaria x ananassa
FAN21G2960 Fragaria x ananassa
FAN21G3366 Fragaria x ananassa
FAN25G2775 Fragaria x ananassa
FvH4_3g33791 Fragaria vesca
FvH4_3g37630 Fragaria vesca
FvH4_3g45250 Fragaria vesca
FvH4_5g12131 Fragaria vesca
FvH4_7g12901 Fragaria vesca
Glyma.04G143300 Glycine max
Glyma.04G156400 Glycine max
Glyma.06G207800 Glycine max
Glyma.08G327600 Glycine max
Glyma.08G327800 Glycine max
Glyma.10G103500 Glycine max
Gohir.A09G192201 Gossypium hirsutum
Gohir.A10G046150 Gossypium hirsutum
Gohir.D09G186450 Gossypium hirsutum
Gohir.D10G047401 Gossypium hirsutum
Gorai.006G209200 Gossypium raimondii
Gorai.011G050500 Gossypium raimondii
Haze_03476 Corylus avellana
Haze_08774 Corylus avellana
Haze_08778 Corylus avellana
Haze_08832 Corylus avellana
Haze_09172 Corylus avellana
Haze_09850 Corylus avellana
Haze_09851 Corylus avellana
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla
Hma1.2p1_2966F.1_g331000 Hydrangea macrophylla
Lalb_Chr09g0330831 Lupinus albus
Lalb_Chr09g0330841 Lupinus albus
Lalb_Chr15g0083841 Lupinus albus
Lalb_Chr15g0085411 Lupinus albus
Lalb_Chr25g0283031 Lupinus albus
Lj2C187T8 Lonicera japonica
Lj2C187T9 Lonicera japonica
Lj3g0017442 Lotus japonicus
Lj5g0002472 Lotus japonicus
Lj5g0023689 Lotus japonicus
Lj6g0000820 Lotus japonicus
Lj6g0004027 Lotus japonicus
Lj6g0011540 Lotus japonicus
Lj6g0015270 Lotus japonicus
Lj6g0022283 Lotus japonicus
Manes.18G109800 Manihot esculenta
Manes.18G110100 Manihot esculenta
Manes.18G110400 Manihot esculenta
Manes.18G110600 Manihot esculenta
Manes.18G110650 Manihot esculenta
Manes.18G110675 Manihot esculenta
Manes.18G110700 Manihot esculenta
Manes.18G142300 Manihot esculenta
Manes.18G142304 Manihot esculenta
Manes.18G142350 Manihot esculenta
MD14G1106900 Malus domestica
Medtr1g032940 Medicago truncatula
Medtr1g040600 Medicago truncatula
Medtr1g045700 Medicago truncatula
Medtr1g045720 Medicago truncatula
Medtr1g045740 Medicago truncatula
Medtr1g046550 Medicago truncatula
Medtr1g046720 Medicago truncatula
Medtr1g046880 Medicago truncatula
Medtr2g058520 Medicago truncatula
Medtr6g004120 Medicago truncatula
Migut.N02448 Erythranthe guttata
Migut.N02454 Erythranthe guttata
Nitab4.5_0000390g0070 Nicotiana tabacum
Nitab4.5_0001033g0070 Nicotiana tabacum
Nitab4.5_0006036g0010 Nicotiana tabacum
Nn1g01519 Nelumbo nucifera
Nn1g06539 Nelumbo nucifera
Nn4g25547 Nelumbo nucifera
Nn4g26398 Nelumbo nucifera
Nn4g26403 Nelumbo nucifera
Nn4g26404 Nelumbo nucifera
Nn4g26406 Nelumbo nucifera
Nn5g28058 Nelumbo nucifera
Oeu040805.1 Olea europaea
Peaxi162Scf00408g00083 Petunia axillaris
Peaxi162Scf00675g00011 Petunia axillaris
PGR031G2861 Punica granatum
PGR031G3325 Punica granatum
PGSC0003DMG400030863 Solanum tuberosum
PGSC0003DMG400030877 Solanum tuberosum
PGSC0003DMG400036318 Solanum tuberosum
PGSC0003DMG400037310 Solanum tuberosum
PGSC0003DMG400039957 Solanum tuberosum
Phvul.009G204600 Phaseolus vulgaris
Potri.003G191700 Populus trichocarpa
Potri.003G191901 Populus trichocarpa
Potri.004G099600 Populus trichocarpa
Prupe.1G396400 Prunus persica
Prupe.5G092200 Prunus persica
Prupe.5G100300 Prunus persica
Prupe.5G102200 Prunus persica
Prupe.5G102300 Prunus persica
Prupe.5G102400 Prunus persica
Prupe.5G102500 Prunus persica
Psat0s4104g0040 Pisum sativum
Psat1g027960 Pisum sativum
Psat5g198760 Pisum sativum
Psat5g198800 Pisum sativum
Psat5g198880 Pisum sativum
Psat5g200760 Pisum sativum
Psat5g200800 Pisum sativum
Psat5g201080 Pisum sativum
Psat6g047560 Pisum sativum
Psat6g107320 Pisum sativum
Psat6g108560 Pisum sativum
PSO063G4780 Papaver somniferum
PSO210G6916 Papaver somniferum
PSO210G7109 Papaver somniferum
PSO591G0308 Papaver somniferum
PSO832G0642 Papaver somniferum
QL02p074390 Quercus lobata
QL02p074400 Quercus lobata
QL02p074404 Quercus lobata
QL02p074896 Quercus lobata
QL02p074910 Quercus lobata
QL02p074932 Quercus lobata
QL02p075014 Quercus lobata
QL02p075024 Quercus lobata
QL02p075052 Quercus lobata
QL02p102432 Quercus lobata
QL02p102444 Quercus lobata
QL02p103065 Quercus lobata
QL02p103081 Quercus lobata
QL04p044927 Quercus lobata
QL08p020768 Quercus lobata
QL08p029391 Quercus lobata
QL08p058979 Quercus lobata
QL08p058986 Quercus lobata
QL10p041557 Quercus lobata
QL10p041578 Quercus lobata
QL10p041964 Quercus lobata
QL10p041994 Quercus lobata
QL12p032645 Quercus lobata
QL12p032673 Quercus lobata
QL12p032723 Quercus lobata
QL12p033094 Quercus lobata
QL93p0165_0009 Quercus lobata
RcHm_v2.0_Chr1g0351961 Rosa chinensis
RcHm_v2.0_Chr2g0116441 Rosa chinensis
RcHm_v2.0_Chr5g0082871 Rosa chinensis
Rhsim07G0090600 Rhododendron simsii
Rhsim07G0090700 Rhododendron simsii
Rhsim07G0090800 Rhododendron simsii
Rhsim13G0098200 Rhododendron simsii
Sabra03G0021400 Salix brachista
Sabra03G0141500 Salix brachista
Sabra03G0141700 Salix brachista
Sabra03G0141900 Salix brachista
Sabra03G0142100 Salix brachista
Sabra03G0142300 Salix brachista
Sabra03G0142500 Salix brachista
Sabra03G0142700 Salix brachista
Sabra03G0142800 Salix brachista
Sabra04G0080300 Salix brachista
Sabra04G0080400 Salix brachista
Sabra04G0086700 Salix brachista
Sabra18G0027300 Salix brachista
Solyc08g075900.1 Solanum lycopersicum
Sopen08g024540 Solanum pennellii
Sopen08g024550 Solanum pennellii
Sp4g16060 Schrenkiella parvula
Sp5g20590 Schrenkiella parvula
Sp7g10240 Schrenkiella parvula
TAR374G0219 Trochodendron aralioides
TAR374G0415 Trochodendron aralioides
TAR374G0438 Trochodendron aralioides
TAR374G0856 Trochodendron aralioides
TAR374G1468 Trochodendron aralioides
TAR374G1505 Trochodendron aralioides
TAR374G1627 Trochodendron aralioides
TAR629G1895 Trochodendron aralioides
THA.LOC104815134 Tarenaya hassleriana
THA.LOC109116201 Tarenaya hassleriana
Thecc.01G009000 Theobroma cacao
Thecc.01G009200 Theobroma cacao
Thecc.01G009300 Theobroma cacao
Thecc.01G156600 Theobroma cacao
Thecc.08G154200 Theobroma cacao
Thhalv10000676m.g Eutrema salsugineum
Thhalv10022244m.g Eutrema salsugineum
Thhalv10028286m.g Eutrema salsugineum
TPR.G10611 Trifolium pratense
TPR.G13069 Trifolium pratense
TPR.G13084 Trifolium pratense
TPR.G13144 Trifolium pratense
TPR.G15856 Trifolium pratense
TPR.G15875 Trifolium pratense
TPR.G19789 Trifolium pratense
TPR.G19803 Trifolium pratense
TPR.G23964 Trifolium pratense
TPR.G23979 Trifolium pratense
TPR.G23983 Trifolium pratense
TPR.G23994 Trifolium pratense
TPR.G23998 Trifolium pratense
TPR.G24005 Trifolium pratense
TPR.G24011 Trifolium pratense
TPR.G25186 Trifolium pratense
TPR.G32054 Trifolium pratense
TPR.G34966 Trifolium pratense
TPR.G36306 Trifolium pratense
TPR.G39275 Trifolium pratense
TPR.G9134 Trifolium pratense
TWI34G0085 Tripterygium wilfordii
VMungo0720G1231 Vigna mungo
VMungo1309G1291 Vigna mungo

User provided reference genes

Program Settings