Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34750 Brassica napus
A03p53950 Brassica napus
A05p41410 Brassica napus
A05p41420 Brassica napus
A09p04830 Brassica napus
Aa31LG11G8100 Aethionema arabicum
Aa31LG5G17180 Aethionema arabicum
Aa31LG6G5070 Aethionema arabicum
Actinidia02036 Actinidia chinensis
Actinidia14528 Actinidia chinensis
Actinidia18455 Actinidia chinensis
Actinidia31542 Actinidia chinensis
Actinidia40380 Actinidia chinensis
Ah.13g071850 Amaranthus hybridus
Ah.13g071860 Amaranthus hybridus
AL2G26690 Arabidopsis lyrata
AL3G17670 Arabidopsis lyrata
AL3G17680 Arabidopsis lyrata
AL3G17690 Arabidopsis lyrata
AL7G30450 Arabidopsis lyrata
AL8G23210 Arabidopsis lyrata
Aqoxy2G02718 Aquilegia oxysepala
Aqoxy7G00417 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AF4BZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AH8SES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2STFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HA59NF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HXJ4DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LD15T5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N1LJUX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P62TZN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PMZJ89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PN1EXH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XPYE9K Arachis hypogaea
AT1G67890 Arabidopsis thaliana
AT3G06620 Arabidopsis thaliana
AT3G06630 Arabidopsis thaliana
AT3G06640 Arabidopsis thaliana
AT4G23050 Arabidopsis thaliana
AT5G49470 Arabidopsis thaliana
ATR0693G324 Amborella trichopoda
ATR0693G455 Amborella trichopoda
ATR0757G127 Amborella trichopoda
Atru.chr4.2996 Acer truncatum
Atru.chr9.1552 Acer truncatum
Atru.chr9.1553 Acer truncatum
AUR62010640 Chenopodium quinoa
AUR62016210 Chenopodium quinoa
AUR62017283 Chenopodium quinoa
AUR62039278 Chenopodium quinoa
BcaB04g19610 Brassica carinata
BcaB07g31501 Brassica carinata
BcaC04g23739 Brassica carinata
BcaC05g30547 Brassica carinata
BcaC07g36817 Brassica carinata
BcaC09g47908 Brassica carinata
BcaC09g47910 Brassica carinata
BcaNung01486 Brassica carinata
BcaNung03242 Brassica carinata
BNapus_Darmor_BZH_scaffold_118p00020 Brassica napus
BNapus_Darmor_BZH_scaffold_118p00030 Brassica napus
BolC1t05596H Brassica oleracea
BolC1t05598H Brassica oleracea
BolC3t16503H Brassica oleracea
BolC5t34721H Brassica oleracea
BolC5t34722H Brassica oleracea
BolC7t45730H Brassica oleracea
BolC9t53446H Brassica oleracea
BraA01t04426Z Brassica rapa
BraA01t04427Z Brassica rapa
BraA03t12656Z Brassica rapa
BraA03t14465Z Brassica rapa
BraA05t22862Z Brassica rapa
BraA05t22863Z Brassica rapa
BraA09t36120Z Brassica rapa
C03p42260 Brassica napus
C03p42270 Brassica napus
C03p42280 Brassica napus
C03p42290 Brassica napus
C05p60630 Brassica napus
C07p52360 Brassica napus
C09p05210 Brassica napus
CAN.G244.15 Capsicum annuum
CAN.G484.63 Capsicum annuum
CAN.G792.91 Capsicum annuum
CAN.G981.20 Capsicum annuum
CANSAT21G0244 Cannabis sativa
CANSAT78G1158 Cannabis sativa
CARHR060540 Cardamine hirsuta
CARHR081160 Cardamine hirsuta
CARHR081170 Cardamine hirsuta
CARHR182030 Cardamine hirsuta
CARHR230110 Cardamine hirsuta
Carub.0002s1438 Capsella rubella
Carub.0003s0608 Capsella rubella
Carub.0003s0610 Capsella rubella
Carub.0007s1822 Capsella rubella
Carub.0008s0933 Capsella rubella
Ca_00978_v3 Cicer arietinum L.
Ca_06656_v3 Cicer arietinum L.
Cc03_g00770 Coffea canephora
Cc08_g14110 Coffea canephora
CDE09G0889 Ceratophyllum demersum
Cfa012114 Carpinus fangiana
Cfa015311 Carpinus fangiana
Ciclev10004362m.g Citrus clementina
Ciclev10019007m.g Citrus clementina
CiPaw.01G138300 Carya illinoinensis
CiPaw.02G074800 Carya illinoinensis
CiPaw.11G140200 Carya illinoinensis
ClCG06G004570 Citrullus lanatus
COL.COLO4_05260 Corchorus olitorius
COL.COLO4_34611 Corchorus olitorius
Cpa.g.sc74.73 Carica papaya
Cpa.g.sc9.52 Carica papaya
CsaV3_6G028600 Cucumis sativus L.
CSS0021732 Camellia sinensis var. sinensis
CSS0031531 Camellia sinensis var. sinensis
CSS0034961 Camellia sinensis var. sinensis
DCAR_002513 Daucus carota
DCAR_004669 Daucus carota
DCAR_023370 Daucus carota
Dinv15164 Davidia involucrata
Dinv37680 Davidia involucrata
Dinv44283 Davidia involucrata
Duzib068G0445 Durio zibethinus
Duzib151G1078 Durio zibethinus
Duzib205G0022 Durio zibethinus
Duzib212G0535 Durio zibethinus
ECA233G4918 Erigeron canadensis
ECA236G2019 Erigeron canadensis
ECA240G0319 Erigeron canadensis
ECA248G1180 Erigeron canadensis
ECA248G2443 Erigeron canadensis
ECA248G2595 Erigeron canadensis
ECA248G3488 Erigeron canadensis
EL10Ac3g05510 Beta vulgaris
EL10Ac5g12741 Beta vulgaris
Eucgr.E00538 Eucalyptus grandis
Eucgr.H04046 Eucalyptus grandis
FAN04G1332 Fragaria x ananassa
FAN07G0577 Fragaria x ananassa
FAN08G2974 Fragaria x ananassa
FAN12G0887 Fragaria x ananassa
FAN12G4344 Fragaria x ananassa
FAN13G2734 Fragaria x ananassa
FAN18G1115 Fragaria x ananassa
FvH4_4g19751 Fragaria vesca
FvH4_4g19752 Fragaria vesca
FvH4_4g19753 Fragaria vesca
FvH4_4g19800 Fragaria vesca
FvH4_5g01670 Fragaria vesca
Glyma.01G217100 Glycine max
Glyma.07G239600 Glycine max
Glyma.09G035400 Glycine max
Glyma.17G033700 Glycine max
Gohir.A02G054701 Gossypium hirsutum
Gohir.A02G054800 Gossypium hirsutum
Gohir.A03G017604 Gossypium hirsutum
Gohir.A09G066200 Gossypium hirsutum
Gohir.A09G234600 Gossypium hirsutum
Gohir.A10G172600 Gossypium hirsutum
Gohir.D02G059700 Gossypium hirsutum
Gohir.D02G059800 Gossypium hirsutum
Gohir.D03G153900 Gossypium hirsutum
Gohir.D09G065400 Gossypium hirsutum
Gohir.D09G235400 Gossypium hirsutum
Gohir.D10G179100 Gossypium hirsutum
Gorai.003G162100 Gossypium raimondii
Gorai.005G067300 Gossypium raimondii
Gorai.005G067400 Gossypium raimondii
Gorai.006G080100 Gossypium raimondii
Gorai.006G258400 Gossypium raimondii
Gorai.011G200300 Gossypium raimondii
GSVIVG01019821001 Vitis vinifera
GSVIVG01034988001 Vitis vinifera
HanXRQChr01g0031011 Helianthus annuus
HanXRQChr02g0048591 Helianthus annuus
HanXRQChr08g0223791 Helianthus annuus
HanXRQChr13g0393521 Helianthus annuus
HanXRQChr13g0412721 Helianthus annuus
Haze_01301 Corylus avellana
Haze_08936 Corylus avellana
Hma1.2p1_0606F.1_g188010 Hydrangea macrophylla
HPP92_017248 Vanilla planifolia
HPP92_017254 Vanilla planifolia
Hund03128 Selenicereus undatus
Hund11520 Selenicereus undatus
Hund11978 Selenicereus undatus
Hund14731 Selenicereus undatus
Lalb_Chr13g0298461 Lupinus albus
Lalb_Chr20g0120831 Lupinus albus
Lj2g0000870 Lotus japonicus
Lj3A831T85 Lonicera japonica
Lj4g0019177 Lotus japonicus
Lj6C691T8 Lonicera japonica
Lj6g0024694 Lotus japonicus
Lj8C237G1 Lonicera japonica
Lsat_1_v5_gn_1_40141 Lactuca sativa
Lsat_1_v5_gn_1_41121 Lactuca sativa
Lsat_1_v5_gn_1_41161 Lactuca sativa
Lsat_1_v5_gn_1_41181 Lactuca sativa
Lsat_1_v5_gn_1_41201 Lactuca sativa
Lsat_1_v5_gn_1_41340 Lactuca sativa
Lsat_1_v5_gn_1_41360 Lactuca sativa
Lsat_1_v5_gn_6_1600 Lactuca sativa
Lsat_1_v5_gn_6_87481 Lactuca sativa
Manes.01G065900 Manihot esculenta
Manes.03G205200 Manihot esculenta
Manes.15G000200 Manihot esculenta
Mapoly0071s0076 Marchantia polymorpha
Mapoly0088s0059 Marchantia polymorpha
MBI04_g00308_MAGBIO Magnolia biondii
MBI18_g37557_MAGBIO Magnolia biondii
MD04G1066000 Malus domestica
MD13G1153300 Malus domestica
MD16G1153700 Malus domestica
Medtr2g034020 Medicago truncatula
Medtr4g122160 Medicago truncatula
Medtr5g010730 Medicago truncatula
MELO3C021267.2 Cucumis melo
Migut.A00928 Erythranthe guttata
Migut.G00064 Erythranthe guttata
Migut.N00040 Erythranthe guttata
MSTRG.12011 Avicennia marina
MSTRG.24822 Avicennia marina
MSTRG.3857 Avicennia marina
Nitab4.5_0000931g0060 Nicotiana tabacum
Nitab4.5_0001200g0160 Nicotiana tabacum
Nitab4.5_0001260g0010 Nicotiana tabacum
Nitab4.5_0002150g0110 Nicotiana tabacum
Nitab4.5_0002150g0120 Nicotiana tabacum
Nitab4.5_0002150g0170 Nicotiana tabacum
Nitab4.5_0002234g0040 Nicotiana tabacum
Nitab4.5_0002294g0030 Nicotiana tabacum
Nitab4.5_0002294g0070 Nicotiana tabacum
Nitab4.5_0002853g0030 Nicotiana tabacum
Nitab4.5_0007065g0020 Nicotiana tabacum
Nn1g01382 Nelumbo nucifera
Nn1g05964 Nelumbo nucifera
Oeu001170.1 Olea europaea
Oeu019978.1 Olea europaea
Oeu048786.1 Olea europaea
Oeu051059.1 Olea europaea
Os11g0678000 Oryza sativa ssp. japonica
Os12g0562500 Oryza sativa ssp. japonica
Peaxi162Scf00102g01433 Petunia axillaris
Peaxi162Scf00228g00321 Petunia axillaris
Peaxi162Scf00714g00427 Petunia axillaris
Peaxi162Scf01160g00021 Petunia axillaris
Peaxi162Scf01160g00022 Petunia axillaris
Peaxi162Scf01160g00140 Petunia axillaris
Peaxi162Scf01160g00146 Petunia axillaris
PGR004G1327 Punica granatum
PGR042G0127 Punica granatum
PGSC0003DMG400003035 Solanum tuberosum
PGSC0003DMG400004695 Solanum tuberosum
PGSC0003DMG400005773 Solanum tuberosum
PGSC0003DMG400024018 Solanum tuberosum
Phvul.002G154800 Phaseolus vulgaris
Phvul.003G114400 Phaseolus vulgaris
Phvul.006G118300 Phaseolus vulgaris
Potri.003G122700 Populus trichocarpa
Potri.008G105100 Populus trichocarpa
Potri.010G146000 Populus trichocarpa
Prupe.1G116900 Prunus persica
Prupe.5G092500 Prunus persica
Psat0ss8330g0200 Pisum sativum
Psat1g160800 Pisum sativum
PSO017G1205 Papaver somniferum
PSO017G3143 Papaver somniferum
PSO017G3828 Papaver somniferum
PSO017G4452 Papaver somniferum
PSO017G5131 Papaver somniferum
PSO017G6156 Papaver somniferum
PSO063G0919 Papaver somniferum
PSO063G3653 Papaver somniferum
PSO063G6497 Papaver somniferum
PSO063G6508 Papaver somniferum
PSO092G0001 Papaver somniferum
PSO101G0001 Papaver somniferum
PSO135G0603 Papaver somniferum
PSO135G0660 Papaver somniferum
PSO144G0143 Papaver somniferum
PSO170G0268 Papaver somniferum
PSO170G0548 Papaver somniferum
PSO170G1092 Papaver somniferum
PSO170G1255 Papaver somniferum
PSO170G1612 Papaver somniferum
PSO170G1694 Papaver somniferum
PSO170G3429 Papaver somniferum
PSO170G3809 Papaver somniferum
PSO170G4660 Papaver somniferum
PSO210G0772 Papaver somniferum
PSO210G6761 Papaver somniferum
PSO339G1893 Papaver somniferum
PSO357G0028 Papaver somniferum
PSO357G0234 Papaver somniferum
PSO384G2198 Papaver somniferum
PSO421G0098 Papaver somniferum
PSO478G1951 Papaver somniferum
PSO541G2370 Papaver somniferum
PSO675G1651 Papaver somniferum
PSO724G0223 Papaver somniferum
PSO724G0676 Papaver somniferum
PSO724G0713 Papaver somniferum
PSO724G1249 Papaver somniferum
PSO761G0329 Papaver somniferum
PSO782G1911 Papaver somniferum
PSO782G4986 Papaver somniferum
PSO782G5492 Papaver somniferum
PSO832G2783 Papaver somniferum
PSO832G4607 Papaver somniferum
PSO837G0009 Papaver somniferum
QL04p086969 Quercus lobata
QL06p012031 Quercus lobata
QL06p012355 Quercus lobata
QL12p017472 Quercus lobata
RcHm_v2.0_Chr4g0425311 Rosa chinensis
RcHm_v2.0_Chr4g0425321 Rosa chinensis
RcHm_v2.0_Chr4g0425331 Rosa chinensis
RcHm_v2.0_Chr4g0425341 Rosa chinensis
RcHm_v2.0_Chr4g0425351 Rosa chinensis
RcHm_v2.0_Chr7g0199051 Rosa chinensis
Rhsim04G0239200 Rhododendron simsii
Sabra03G0086500 Salix brachista
Sabra08G0079300 Salix brachista
Sabra10G0112500 Salix brachista
SalBow5G4228 Salvia bowleyana
SalBow6G2351 Salvia bowleyana
SalBow8G5179 Salvia bowleyana
Sc01g0008700 Simmondsia chinensis
Sc07g0009560 Simmondsia chinensis
Sc19g0003110 Simmondsia chinensis
Sed0016097 Sechium edule
Sed0021682 Sechium edule
SEGI_01284 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08406 Striga asiatica
SGA_v2.0_scaffold286G47085 Striga asiatica
SGA_v2.0_scaffold480G52300 Striga asiatica
SMO134G0051 Selaginella moellendorffii
SMO332G0014 Selaginella moellendorffii
Solyc01g059860.3 Solanum lycopersicum
Solyc08g007910.4 Solanum lycopersicum
Solyc08g080453.1 Solanum lycopersicum
Solyc08g080457.1 Solanum lycopersicum
Solyc12g099250.2 Solanum lycopersicum
Sopen01g025170 Solanum pennellii
Sopen08g003810 Solanum pennellii
Sopen08g028780 Solanum pennellii
Sopen12g033930 Solanum pennellii
Sp2g19790 Schrenkiella parvula
Sp3g05550 Schrenkiella parvula
Sp3g05570 Schrenkiella parvula
Sp3g05580 Schrenkiella parvula
Sp7g21130 Schrenkiella parvula
SpUn0021_0060 Schrenkiella parvula
TAR362G1078 Trochodendron aralioides
TAR374G1559 Trochodendron aralioides
TAR633G0194 Trochodendron aralioides
TAR636G0638 Trochodendron aralioides
THA.LOC104813015 Tarenaya hassleriana
THA.LOC104818882 Tarenaya hassleriana
Thecc.03G272400 Theobroma cacao
Thecc.04G301300 Theobroma cacao
Thhalv10003711m.g Eutrema salsugineum
Thhalv10020121m.g Eutrema salsugineum
Thhalv10020142m.g Eutrema salsugineum
Thhalv10024532m.g Eutrema salsugineum
TPR.G13751 Trifolium pratense
TPR.G25428 Trifolium pratense
TPR.G6713 Trifolium pratense
TWI15G0249 Tripterygium wilfordii
TWI53G1080 Tripterygium wilfordii
TWI73G0526 Tripterygium wilfordii
vmacro08043 Vaccinium macrocarpon
VMungo0540G1708 Vigna mungo
VMungo1215G1463 Vigna mungo
VMungo1215G3109 Vigna mungo
Zm00001eb028510 Zea mays
Zm00001eb136940 Zea mays
Zm00001eb165210 Zea mays

User provided reference genes

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