Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02820 Brassica napus
A02p42160 Brassica napus
A03p63920 Brassica napus
A07p41480 Brassica napus
A08p21620 Brassica napus
A09p43430 Brassica napus
A09p68970 Brassica napus
Aa31LG1G14580 Aethionema arabicum
Aa31LG6G12840 Aethionema arabicum
Actinidia02366 Actinidia chinensis
Actinidia15451 Actinidia chinensis
Actinidia17413 Actinidia chinensis
Actinidia17414 Actinidia chinensis
Actinidia22946 Actinidia chinensis
Actinidia28722 Actinidia chinensis
Actinidia28723 Actinidia chinensis
Actinidia35668 Actinidia chinensis
Ah.00g000770 Amaranthus hybridus
Ah.02g123300 Amaranthus hybridus
Ah.03g143210 Amaranthus hybridus
AL2G35990 Arabidopsis lyrata
AL7G15160 Arabidopsis lyrata
AL8G45490 Arabidopsis lyrata
Aqoxy5G02362 Aquilegia oxysepala
Aqoxy6G02124 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52XSZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8AT62F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G00RBV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GW5Q3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q38LJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q99BEQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZS3UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJWL0V Arachis hypogaea
AT4G35890 Arabidopsis thaliana
AT5G66100 Arabidopsis thaliana
ATR0994G004 Amborella trichopoda
Atru.chr13.243 Acer truncatum
Atru.chr2.992 Acer truncatum
Atru.chr3.882 Acer truncatum
Atru.chr3.893 Acer truncatum
Atru.chr7.2367 Acer truncatum
Atru.chr7.2487 Acer truncatum
AUR62003706 Chenopodium quinoa
AUR62018014 Chenopodium quinoa
BcaB03g12431 Brassica carinata
BcaC01g00526 Brassica carinata
BcaC04g23112 Brassica carinata
BcaC08g47091 Brassica carinata
BcaNung04884 Brassica carinata
BcaNung05056 Brassica carinata
BolC1t00300H Brassica oleracea
BolC3t20355H Brassica oleracea
BolC7t46565H Brassica oleracea
BolC9t54094H Brassica oleracea
BraA01t00265Z Brassica rapa
BraA03t15461Z Brassica rapa
BraA08t34109Z Brassica rapa
BraA09t36660Z Brassica rapa
C01p03150 Brassica napus
C03p80960 Brassica napus
C04p04360 Brassica napus
C05p19700 Brassica napus
C07p11540 Brassica napus
C07p61390 Brassica napus
C09p12040 Brassica napus
CAN.G311.57 Capsicum annuum
CAN.G576.3 Capsicum annuum
CAN.G576.6 Capsicum annuum
CANSAT01G3132 Cannabis sativa
CARHR244280 Cardamine hirsuta
CARHR281650 Cardamine hirsuta
Carub.0007s0434 Capsella rubella
Carub.0008s2839 Capsella rubella
Ca_03634_v3 Cicer arietinum L.
Ca_15475_v3 Cicer arietinum L.
Ca_24935_v3 Cicer arietinum L.
Cc07_g11180 Coffea canephora
Cc10_g01320 Coffea canephora
CDE02G0571 Ceratophyllum demersum
CDE02G0950 Ceratophyllum demersum
CDE02G2854 Ceratophyllum demersum
CDE08G0510 Ceratophyllum demersum
CDE08G1369 Ceratophyllum demersum
CDE09G0323 Ceratophyllum demersum
Cfa007017 Carpinus fangiana
Cfa013990 Carpinus fangiana
Cfa026493 Carpinus fangiana
Ciclev10000767m.g Citrus clementina
Ciclev10025634m.g Citrus clementina
CiPaw.07G061900 Carya illinoinensis
CiPaw.07G145200 Carya illinoinensis
CiPaw.08G068500 Carya illinoinensis
CiPaw.08G127500 Carya illinoinensis
ClCG01G020520 Citrullus lanatus
ClCG05G015530 Citrullus lanatus
COL.COLO4_08819 Corchorus olitorius
COL.COLO4_22479 Corchorus olitorius
COL.COLO4_22480 Corchorus olitorius
COL.COLO4_24219 Corchorus olitorius
COL.COLO4_26105 Corchorus olitorius
COL.COLO4_26106 Corchorus olitorius
Cpa.g.sc26.285 Carica papaya
Cpa.g.sc26.286 Carica papaya
Cpa.g.sc6.300 Carica papaya
CsaV3_3G046030 Cucumis sativus L.
CsaV3_6G047400 Cucumis sativus L.
CsaV3_6G047420 Cucumis sativus L.
CSS0013209 Camellia sinensis var. sinensis
CSS0031735 Camellia sinensis var. sinensis
CSS0032713 Camellia sinensis var. sinensis
CSS0035951 Camellia sinensis var. sinensis
DCAR_011612 Daucus carota
DCAR_013887 Daucus carota
DCAR_016736 Daucus carota
DCAR_022939 Daucus carota
DCAR_027262 Daucus carota
Dinv08560 Davidia involucrata
Dinv31880 Davidia involucrata
Dinv39547 Davidia involucrata
Duzib093G0045 Durio zibethinus
Duzib116G0334 Durio zibethinus
Duzib147G0727 Durio zibethinus
Duzib187G1973 Durio zibethinus
Duzib264G0858 Durio zibethinus
ECA232G1530 Erigeron canadensis
ECA233G3641 Erigeron canadensis
ECA238G1726 Erigeron canadensis
ECA238G4049 Erigeron canadensis
EL10Ac1g02138 Beta vulgaris
EL10Ac6g15166 Beta vulgaris
Eucgr.F01675 Eucalyptus grandis
Eucgr.F03731 Eucalyptus grandis
Eucgr.I02318 Eucalyptus grandis
Eucgr.J02483 Eucalyptus grandis
FAN07G1864 Fragaria x ananassa
FAN12G0816 Fragaria x ananassa
FAN12G3208 Fragaria x ananassa
FAN15G2372 Fragaria x ananassa
FAN17G0936 Fragaria x ananassa
FAN17G1027 Fragaria x ananassa
FAN17G2311 Fragaria x ananassa
FAN19G0158 Fragaria x ananassa
FAN20G0221 Fragaria x ananassa
FAN22G1688 Fragaria x ananassa
FAN22G1813 Fragaria x ananassa
FAN23G2699 Fragaria x ananassa
FAN26G0382 Fragaria x ananassa
FAN27G0608 Fragaria x ananassa
FAN28G0595 Fragaria x ananassa
FvH4_1g11260 Fragaria vesca
FvH4_2g38070 Fragaria vesca
FvH4_3g02470 Fragaria vesca
FvH4_4g29920 Fragaria vesca
FvH4_4g29960 Fragaria vesca
Glyma.01G163300 Glycine max
Glyma.02G045400 Glycine max
Glyma.04G021900 Glycine max
Glyma.06G022100 Glycine max
Glyma.11G080100 Glycine max
Glyma.14G221100 Glycine max
Glyma.16G123100 Glycine max
Glyma.17G260000 Glycine max
Gohir.A01G109600 Gossypium hirsutum
Gohir.A02G072300 Gossypium hirsutum
Gohir.A02G173300 Gossypium hirsutum
Gohir.A02G173400 Gossypium hirsutum
Gohir.A11G041200 Gossypium hirsutum
Gohir.A11G172800 Gossypium hirsutum
Gohir.D01G096400 Gossypium hirsutum
Gohir.D03G006500 Gossypium hirsutum
Gohir.D03G006600 Gossypium hirsutum
Gohir.D11G044500 Gossypium hirsutum
Gohir.D11G179600 Gossypium hirsutum
Gorai.002G121900 Gossypium raimondii
Gorai.003G006800 Gossypium raimondii
Gorai.003G006900 Gossypium raimondii
Gorai.007G047800 Gossypium raimondii
Gorai.007G191700 Gossypium raimondii
GSVIVG01006333001 Vitis vinifera
GSVIVG01009971001 Vitis vinifera
HanXRQChr09g0245191 Helianthus annuus
HanXRQChr09g0245211 Helianthus annuus
HanXRQChr09g0257361 Helianthus annuus
HanXRQChr13g0386901 Helianthus annuus
HanXRQChr13g0414561 Helianthus annuus
HanXRQChr14g0429641 Helianthus annuus
HanXRQChr14g0441741 Helianthus annuus
HanXRQChr16g0531761 Helianthus annuus
Haze_03714 Corylus avellana
Haze_22677 Corylus avellana
Hma1.2p1_0315F.1_g122430 Hydrangea macrophylla
Hma1.2p1_0733F.1_g210100 Hydrangea macrophylla
HPP92_012945 Vanilla planifolia
HPP92_014534 Vanilla planifolia
HPP92_015016 Vanilla planifolia
HPP92_025900 Vanilla planifolia
HPP92_025906 Vanilla planifolia
Hund14068 Selenicereus undatus
Hund16513 Selenicereus undatus
Lalb_Chr01g0008541 Lupinus albus
Lalb_Chr03g0033491 Lupinus albus
Lalb_Chr09g0321501 Lupinus albus
Lalb_Chr16g0377401 Lupinus albus
Lalb_Chr16g0391461 Lupinus albus
Lalb_Chr19g0131511 Lupinus albus
Lj1g0020044 Lotus japonicus
Lj2A482G64 Lonicera japonica
Lj2g0023288 Lotus japonicus
Lj4A19T11 Lonicera japonica
Lj4A800G36 Lonicera japonica
Lj4C223T13 Lonicera japonica
Lj4g0022960 Lotus japonicus
Lj5g0020448 Lotus japonicus
Lsat_1_v5_gn_2_75581 Lactuca sativa
Lsat_1_v5_gn_2_7780 Lactuca sativa
Lsat_1_v5_gn_3_71121 Lactuca sativa
Lsat_1_v5_gn_3_71141 Lactuca sativa
Lsat_1_v5_gn_3_71281 Lactuca sativa
Lsat_1_v5_gn_4_144940 Lactuca sativa
Lsat_1_v5_gn_8_29700 Lactuca sativa
Manes.01G150000 Manihot esculenta
Manes.02G109100 Manihot esculenta
Manes.05G144300 Manihot esculenta
Manes.18G011260 Manihot esculenta
MBI03_g46669_MAGBIO Magnolia biondii
MBI04_g41766_MAGBIO Magnolia biondii
MBI08_g12328_MAGBIO Magnolia biondii
MCO09G092 Micromonas commoda
MD02G1125000 Malus domestica
MD08G1009300 Malus domestica
MD15G1008200 Malus domestica
MD15G1240700 Malus domestica
Medtr1g025920 Medicago truncatula
Medtr3g114340 Medicago truncatula
Medtr3g114450 Medicago truncatula
Medtr5g022790 Medicago truncatula
Medtr8g075120 Medicago truncatula
MELO3C003736.2 Cucumis melo
MELO3C007932.2 Cucumis melo
MELO3C007933.2 Cucumis melo
Migut.L00906 Erythranthe guttata
Migut.L00908 Erythranthe guttata
Migut.L00970 Erythranthe guttata
Migut.N03180 Erythranthe guttata
MSTRG.15584 Avicennia marina
MSTRG.24233 Avicennia marina
MSTRG.25270 Avicennia marina
Nitab4.5_0000188g0170 Nicotiana tabacum
Nitab4.5_0000188g0180 Nicotiana tabacum
Nitab4.5_0001647g0110 Nicotiana tabacum
Nitab4.5_0002337g0100 Nicotiana tabacum
Nitab4.5_0002337g0160 Nicotiana tabacum
Nitab4.5_0008247g0010 Nicotiana tabacum
Nitab4.5_0008954g0030 Nicotiana tabacum
Nn1g08888 Nelumbo nucifera
Nn5g28414 Nelumbo nucifera
Nn5g30805 Nelumbo nucifera
Nn6g31956 Nelumbo nucifera
Oeu013880.1 Olea europaea
Oeu014018.1 Olea europaea
Oeu026634.2 Olea europaea
Oeu039729.1 Olea europaea
Oeu051160.1 Olea europaea
Os03g0156500 Oryza sativa ssp. japonica
Os03g0859300 Oryza sativa ssp. japonica
Peaxi162Scf00328g00319 Petunia axillaris
Peaxi162Scf00439g00410 Petunia axillaris
Peaxi162Scf00672g00047 Petunia axillaris
PGR083G0773 Punica granatum
PGR102G2311 Punica granatum
PGR119G1496 Punica granatum
PGSC0003DMG400009440 Solanum tuberosum
PGSC0003DMG400009948 Solanum tuberosum
Phvul.001G004033 Phaseolus vulgaris
Phvul.001G004100 Phaseolus vulgaris
Phvul.002G105500 Phaseolus vulgaris
Phvul.003G266200 Phaseolus vulgaris
Phvul.009G018800 Phaseolus vulgaris
Potri.005G109400 Populus trichocarpa
Potri.005G243600 Populus trichocarpa
Potri.007G063600 Populus trichocarpa
PRCOL_00001169 Prasinoderma coloniale
Prupe.1G361000 Prunus persica
Prupe.3G218300 Prunus persica
Prupe.7G173400 Prunus persica
Psat2g152440 Pisum sativum
Psat4g102240 Pisum sativum
Psat5g011240 Pisum sativum
Psat6g001640 Pisum sativum
PSO017G0295 Papaver somniferum
PSO170G1085 Papaver somniferum
PSO170G2829 Papaver somniferum
PSO339G2170 Papaver somniferum
PSO339G3694 Papaver somniferum
PSO339G4673 Papaver somniferum
PSO541G3239 Papaver somniferum
PSO675G1812 Papaver somniferum
PSO700G0118 Papaver somniferum
QL02p012478 Quercus lobata
QL04p027419 Quercus lobata
QL06p051361 Quercus lobata
RcHm_v2.0_Chr2g0098711 Rosa chinensis
RcHm_v2.0_Chr6g0303491 Rosa chinensis
Rhsim06G0017700 Rhododendron simsii
Rhsim08G0031300 Rhododendron simsii
Rhsim10G0206800 Rhododendron simsii
Sabra05G0089600 Salix brachista
Sabra05G0188600 Salix brachista
SalBow1G1041 Salvia bowleyana
SalBow1G7773 Salvia bowleyana
SalBow5G1953 Salvia bowleyana
SalBow5G2858 Salvia bowleyana
SalBow6G1288 Salvia bowleyana
SalBow6G1880 Salvia bowleyana
SalBow7G3509 Salvia bowleyana
Sc02g0008750 Simmondsia chinensis
Sc07g0001160 Simmondsia chinensis
Sc15g0004760 Simmondsia chinensis
Sc16g0001880 Simmondsia chinensis
Sed0002729 Sechium edule
Sed0015489 Sechium edule
Sed0024981 Sechium edule
Sed0025993 Sechium edule
SGA_v2.0_scaffold145G36079 Striga asiatica
SGA_v2.0_scaffold19G08565 Striga asiatica
SGA_v2.0_scaffold25G11206 Striga asiatica
SMO119G0511 Selaginella moellendorffii
Solyc02g061960.3 Solanum lycopersicum
Solyc02g061980.3 Solanum lycopersicum
Solyc04g081820.3 Solanum lycopersicum
Sopen02g012920 Solanum pennellii
Sopen02g012940 Solanum pennellii
Sopen04g035450 Solanum pennellii
Sp2g30590 Schrenkiella parvula
Sp5g31090 Schrenkiella parvula
Sp7g33670 Schrenkiella parvula
TAR376G0348 Trochodendron aralioides
TAR376G0461 Trochodendron aralioides
TAR376G0483 Trochodendron aralioides
TAR376G0893 Trochodendron aralioides
TAR376G1147 Trochodendron aralioides
TAR381G0626 Trochodendron aralioides
TAR381G0800 Trochodendron aralioides
TAR381G1569 Trochodendron aralioides
TAR401G0001 Trochodendron aralioides
TAR625G1154 Trochodendron aralioides
TAR628G0873 Trochodendron aralioides
TAR628G1081 Trochodendron aralioides
TAR628G1454 Trochodendron aralioides
THA.LOC104807509 Tarenaya hassleriana
THA.LOC104819169 Tarenaya hassleriana
THA.LOC104819738 Tarenaya hassleriana
Thecc.01G013200 Theobroma cacao
Thecc.08G049100 Theobroma cacao
Thhalv10024905m.g Eutrema salsugineum
TPR.G19509 Trifolium pratense
TPR.G202 Trifolium pratense
TPR.G25128 Trifolium pratense
TPR.G26377 Trifolium pratense
TPR.G38088 Trifolium pratense
TWI36G1177 Tripterygium wilfordii
TWI53G0756 Tripterygium wilfordii
TWI56G0858 Tripterygium wilfordii
TWI73G0370 Tripterygium wilfordii
unitig_0.g2091 Utricularia gibba
unitig_26.g9888 Utricularia gibba
unitig_27.g25135 Utricularia gibba
unitig_747.g21526 Utricularia gibba
vmacro18431 Vaccinium macrocarpon
vmacro21866 Vaccinium macrocarpon
vmacro22201 Vaccinium macrocarpon
vmacro23404 Vaccinium macrocarpon
VMungo0251G2345 Vigna mungo
VMungo0647G0253 Vigna mungo
VMungo0647G1732 Vigna mungo
VMungo0647G2282 Vigna mungo
VMungo1215G1291 Vigna mungo
VMungo1309G2341 Vigna mungo
Zm00001eb004290 Zea mays
Zm00001eb065130 Zea mays
Zm00001eb210380 Zea mays
Zm00001eb403210 Zea mays

User provided reference genes

Program Settings