Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27110 Brassica napus
Aa31LG8G8290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1826 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5114 Anthoceros agrestis
Actinidia03600 Actinidia chinensis
Actinidia09733 Actinidia chinensis
Actinidia11868 Actinidia chinensis
Actinidia11869 Actinidia chinensis
Actinidia13741 Actinidia chinensis
Actinidia27719 Actinidia chinensis
Actinidia27720 Actinidia chinensis
Ah.02g115730 Amaranthus hybridus
Ah.08g209830 Amaranthus hybridus
Ah.10g034100 Amaranthus hybridus
AL3G35750 Arabidopsis lyrata
Aqoxy1G03020 Aquilegia oxysepala
Aqoxy1G03458 Aquilegia oxysepala
Aqoxy1G03459 Aquilegia oxysepala
Aqoxy5G01822 Aquilegia oxysepala
Aqoxy66s003 Aquilegia oxysepala
Aqoxy66s004 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4B5N5U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4F85GC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.63XNPZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84VILP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.980TN7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AD8450 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8H53E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0J8BA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4ETAH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GPB067 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IKZ5YQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IM7I4N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVY8DS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2D2HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX792F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PUJ8NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RPPZ03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SA9NCH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6F4RL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4FLVM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1BJPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWI1K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWD1JY Arachis hypogaea
AT3G21630 Arabidopsis thaliana
ATR0624G045 Amborella trichopoda
ATR0624G049 Amborella trichopoda
ATR1128G010 Amborella trichopoda
Atru.chr10.2272 Acer truncatum
Atru.chr6.3233 Acer truncatum
AUR62006327 Chenopodium quinoa
AUR62009116 Chenopodium quinoa
AUR62026365 Chenopodium quinoa
AUR62030718 Chenopodium quinoa
AUR62036355 Chenopodium quinoa
AUR62039142 Chenopodium quinoa
BcaB06g26268 Brassica carinata
BcaC05g28151 Brassica carinata
BolC5t32916H Brassica oleracea
BolC5t32917H Brassica oleracea
BraA05t21596Z Brassica rapa
BraA05t21597Z Brassica rapa
C05p41850 Brassica napus
CAN.G1014.40 Capsicum annuum
CAN.G1014.41 Capsicum annuum
CAN.G1014.42 Capsicum annuum
CAN.G1328.12 Capsicum annuum
CAN.G1328.6 Capsicum annuum
CAN.G1328.8 Capsicum annuum
CAN.G134.230 Capsicum annuum
CAN.G134.231 Capsicum annuum
CAN.G134.232 Capsicum annuum
CAN.G2065.3 Capsicum annuum
CANSAT56G2305 Cannabis sativa
CANSAT64G1988 Cannabis sativa
CARHR097600 Cardamine hirsuta
Carub.0003s2167 Capsella rubella
Carub.0003s2168 Capsella rubella
Ca_00687_v3 Cicer arietinum L.
Ca_06111_v3 Cicer arietinum L.
Ca_06115_v3 Cicer arietinum L.
Ca_06121_v3 Cicer arietinum L.
Ca_16271_v3 Cicer arietinum L.
CBR_g18574 Chara braunii
CBR_g30047 Chara braunii
CBR_g30400 Chara braunii
CBR_g50598 Chara braunii
CBR_g91196 Chara braunii
Cc05_g03310 Coffea canephora
Cc05_g03320 Coffea canephora
Cc05_g03330 Coffea canephora
Cc05_g03340 Coffea canephora
Cc09_g01300 Coffea canephora
CDE11G0866 Ceratophyllum demersum
CDE11G1112 Ceratophyllum demersum
CDE11G1157 Ceratophyllum demersum
Cfa000170 Carpinus fangiana
Cfa014335 Carpinus fangiana
Ciclev10017678m.g Citrus clementina
Ciclev10018017m.g Citrus clementina
Ciclev10018219m.g Citrus clementina
CiPaw.03G157400 Carya illinoinensis
CiPaw.04G112200 Carya illinoinensis
CiPaw.04G112300 Carya illinoinensis
CiPaw.04G112400 Carya illinoinensis
CiPaw.04G112500 Carya illinoinensis
CiPaw.04G112800 Carya illinoinensis
CiPaw.10G074000 Carya illinoinensis
ClCG02G002120 Citrullus lanatus
COL.COLO4_21847 Corchorus olitorius
COL.COLO4_21848 Corchorus olitorius
COL.COLO4_21849 Corchorus olitorius
COL.COLO4_25447 Corchorus olitorius
COL.COLO4_31825 Corchorus olitorius
Cpa.g.sc132.1 Carica papaya
Cpa.g.sc87.117 Carica papaya
CsaV3_7G003380 Cucumis sativus L.
CSS0015083 Camellia sinensis var. sinensis
CSS0023473 Camellia sinensis var. sinensis
CSS0042427 Camellia sinensis var. sinensis
CSS0043503 Camellia sinensis var. sinensis
CSS0050445 Camellia sinensis var. sinensis
DCAR_012934 Daucus carota
DCAR_021149 Daucus carota
DCAR_028345 Daucus carota
DCAR_031634 Daucus carota
DCAR_032324 Daucus carota
Dinv08738 Davidia involucrata
Dinv13932 Davidia involucrata
Dinv13933 Davidia involucrata
Dinv20099 Davidia involucrata
Duzib133G0815 Durio zibethinus
Duzib211G0609 Durio zibethinus
Duzib235G0242 Durio zibethinus
ECA240G2436 Erigeron canadensis
ECA248G0400 Erigeron canadensis
EL10Ac2g03823 Beta vulgaris
EL10Ac5g11856 Beta vulgaris
EL10Ac5g11857 Beta vulgaris
EL10Ac7g17034 Beta vulgaris
Eucgr.A01102 Eucalyptus grandis
Eucgr.A01103 Eucalyptus grandis
Eucgr.A01104 Eucalyptus grandis
Eucgr.A01105 Eucalyptus grandis
Eucgr.E03996 Eucalyptus grandis
FAN02G3117 Fragaria x ananassa
FAN05G4143 Fragaria x ananassa
FAN09G1830 Fragaria x ananassa
FAN09G2480 Fragaria x ananassa
FAN14G0450 Fragaria x ananassa
FAN21G2145 Fragaria x ananassa
FvH4_3g01490 Fragaria vesca
FvH4_6g42640 Fragaria vesca
Glyma.02G270700 Glycine max
Glyma.02G270800 Glycine max
Glyma.09G006900 Glycine max
Glyma.14G046200 Glycine max
Glyma.14G046300 Glycine max
Glyma.15G111300 Glycine max
Glyma.20G054500 Glycine max
Gohir.A07G083700 Gossypium hirsutum
Gohir.A10G011400 Gossypium hirsutum
Gohir.A11G153875 Gossypium hirsutum
Gohir.D07G089801 Gossypium hirsutum
Gohir.D10G010900 Gossypium hirsutum
Gohir.D11G160700 Gossypium hirsutum
Gorai.001G096000 Gossypium raimondii
Gorai.007G171300 Gossypium raimondii
Gorai.011G012100 Gossypium raimondii
GSVIVG01012662001 Vitis vinifera
GSVIVG01012664001 Vitis vinifera
GSVIVG01012665001 Vitis vinifera
GSVIVG01030482001 Vitis vinifera
HanXRQChr01g0006491 Helianthus annuus
HanXRQChr02g0036131 Helianthus annuus
HanXRQChr03g0073441 Helianthus annuus
HanXRQChr09g0245561 Helianthus annuus
HanXRQChr09g0245571 Helianthus annuus
HanXRQChr15g0490321 Helianthus annuus
HanXRQChr15g0490351 Helianthus annuus
HanXRQChr15g0490361 Helianthus annuus
Haze_06849 Corylus avellana
Haze_12791 Corylus avellana
Hma1.2p1_0895F.1_g233730 Hydrangea macrophylla
HPP92_003087 Vanilla planifolia
HPP92_007047 Vanilla planifolia
HPP92_024387 Vanilla planifolia
Hund03320 Selenicereus undatus
Hund03322 Selenicereus undatus
Hund10857 Selenicereus undatus
Hund19815 Selenicereus undatus
Lalb_Chr01g0013631 Lupinus albus
Lalb_Chr04g0249871 Lupinus albus
Lalb_Chr04g0263521 Lupinus albus
Lalb_Chr10g0105711 Lupinus albus
Lalb_Chr10g0105721 Lupinus albus
Lj1C1235G12 Lonicera japonica
Lj1P1235T80 Lonicera japonica
Lj2g0002173 Lotus japonicus
Lj2g0025285 Lotus japonicus
Lj6g0011405 Lotus japonicus
Lj6g0024268 Lotus japonicus
Lj8A128T50 Lonicera japonica
LjContig00564g0009683 Lotus japonicus
Lsat_1_v5_gn_1_129101 Lactuca sativa
Lsat_1_v5_gn_9_106720 Lactuca sativa
Lsat_1_v5_gn_9_107540 Lactuca sativa
Manes.12G071800 Manihot esculenta
Manes.13G068500 Manihot esculenta
Manes.17G028100 Manihot esculenta
Mapoly0080s0051 Marchantia polymorpha
MBI19_g16141_MAGBIO Magnolia biondii
MD05G1351500 Malus domestica
MD09G1111800 Malus domestica
MD13G1277200 Malus domestica
MD17G1102100 Malus domestica
Medtr2g024290 Medicago truncatula
Medtr3g080050 Medicago truncatula
Medtr5g078600 Medicago truncatula
Medtr5g086030 Medicago truncatula
Medtr5g086040 Medicago truncatula
Medtr5g086050 Medicago truncatula
Medtr5g086080 Medicago truncatula
Medtr5g086090 Medicago truncatula
Medtr5g086110 Medicago truncatula
Medtr5g086120 Medicago truncatula
Medtr5g086130 Medicago truncatula
Medtr5g086310 Medicago truncatula
Medtr5g086330 Medicago truncatula
Medtr5g086540 Medicago truncatula
Medtr5g086660 Medicago truncatula
MELO3C018836.2 Cucumis melo
Migut.H01233 Erythranthe guttata
Migut.H01586 Erythranthe guttata
MSTRG.14631 Avicennia marina
Nitab4.5_0000245g0280 Nicotiana tabacum
Nitab4.5_0000482g0030 Nicotiana tabacum
Nitab4.5_0000482g0050 Nicotiana tabacum
Nitab4.5_0001409g0240 Nicotiana tabacum
Nitab4.5_0001903g0150 Nicotiana tabacum
Nitab4.5_0005321g0020 Nicotiana tabacum
Nitab4.5_0007209g0020 Nicotiana tabacum
Nitab4.5_0007209g0030 Nicotiana tabacum
Nn1g03427 Nelumbo nucifera
Nn1g07248 Nelumbo nucifera
Oeu036558.1 Olea europaea
Oeu041263.1 Olea europaea
Oeu049691.1 Olea europaea
Oeu049692.1 Olea europaea
Os08g0538300 Oryza sativa ssp. japonica
Os09g0325140 Oryza sativa ssp. japonica
Os09g0511000 Oryza sativa ssp. japonica
Peaxi162Scf00178g00310 Petunia axillaris
Peaxi162Scf00921g00021 Petunia axillaris
PGR042G2978 Punica granatum
PGSC0003DMG400001361 Solanum tuberosum
PGSC0003DMG400016433 Solanum tuberosum
PGSC0003DMG400028560 Solanum tuberosum
PGSC0003DMG400028561 Solanum tuberosum
PGSC0003DMG400028562 Solanum tuberosum
PGSC0003DMG401000674 Solanum tuberosum
PGSC0003DMG402000674 Solanum tuberosum
Phvul.006G006700 Phaseolus vulgaris
Phvul.006G146400 Phaseolus vulgaris
Phvul.008G211100 Phaseolus vulgaris
Phvul.008G211200 Phaseolus vulgaris
Potri.002G226600 Populus trichocarpa
Potri.011G010000 Populus trichocarpa
Potri.014G156400 Populus trichocarpa
Pp3c11_6330 Physcomitrium patens
Pp3c27_2280 Physcomitrium patens
Pp3c5_4120 Physcomitrium patens
Pp3c5_4140 Physcomitrium patens
Pp3c7_25560 Physcomitrium patens
Prupe.3G213000 Prunus persica
Prupe.3G213100 Prunus persica
Prupe.4G016100 Prunus persica
Psat0s1360g0040 Pisum sativum
Psat1g177880 Pisum sativum
Psat1g177920 Pisum sativum
Psat2g024200 Pisum sativum
Psat2g024280 Pisum sativum
Psat2g024320 Pisum sativum
Psat5g112080 Pisum sativum
PSO210G6766 Papaver somniferum
PSO541G1728 Papaver somniferum
PSO675G7148 Papaver somniferum
PSO832G0311 Papaver somniferum
QL05p072074 Quercus lobata
QL05p072081 Quercus lobata
QL05p072118 Quercus lobata
QL05p072168 Quercus lobata
QL05p072185 Quercus lobata
QL05p072207 Quercus lobata
QL08p031244 Quercus lobata
QL08p031253 Quercus lobata
QL08p031262 Quercus lobata
QL08p031298 Quercus lobata
QL08p031311 Quercus lobata
RcHm_v2.0_Chr2g0158511 Rosa chinensis
RcHm_v2.0_Chr2g0158521 Rosa chinensis
RcHm_v2.0_Chr5g0002351 Rosa chinensis
RcHm_v2.0_Chr7g0236981 Rosa chinensis
Rhsim04G0048100 Rhododendron simsii
Rhsim04G0048200 Rhododendron simsii
Rhsim04G0051700 Rhododendron simsii
Rhsim04G0051800 Rhododendron simsii
Rhsim04G0052000 Rhododendron simsii
Rhsim05G0058000 Rhododendron simsii
Rhsim06G0134800 Rhododendron simsii
Rhsim06G0165900 Rhododendron simsii
Sabra02G0173200 Salix brachista
Sabra05G0024600 Salix brachista
Sabra14G0118300 Salix brachista
SalBow1G5156 Salvia bowleyana
Sc12g0002160 Simmondsia chinensis
Sc12g0002170 Simmondsia chinensis
Sc12g0002180 Simmondsia chinensis
Sed0012663 Sechium edule
SEGI_16362 Sequoiadendron giganteum
SEGI_35282 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37564 Striga asiatica
SGA_v2.0_scaffold49G18252 Striga asiatica
SGA_v2.0_scaffold5278G54620 Striga asiatica
SGA_v2.0_scaffold89G27480 Striga asiatica
SHI00001 Sapria himalayana
SMO081G0001 Selaginella moellendorffii
SMO133G0013 Selaginella moellendorffii
SMO171G0103 Selaginella moellendorffii
Solyc01g098410.4 Solanum lycopersicum
Solyc02g081040.4 Solanum lycopersicum
Solyc02g081050.4 Solanum lycopersicum
Solyc07g049180.3 Solanum lycopersicum
Solyc07g049190.4 Solanum lycopersicum
Sopen01g041980 Solanum pennellii
Sopen02g025710 Solanum pennellii
Sopen02g025720 Solanum pennellii
Sopen07g025160 Solanum pennellii
Sopen07g025170 Solanum pennellii
Sp3g19650 Schrenkiella parvula
TAR624G1178 Trochodendron aralioides
THA.LOC104802546 Tarenaya hassleriana
Thecc.01G179400 Theobroma cacao
Thecc.01G179600 Theobroma cacao
Thecc.01G179700 Theobroma cacao
Thecc.06G227000 Theobroma cacao
Thhalv10020310m.g Eutrema salsugineum
TPR.G13002 Trifolium pratense
TPR.G13133 Trifolium pratense
TPR.G13156 Trifolium pratense
TPR.G14448 Trifolium pratense
TPR.G14455 Trifolium pratense
TPR.G14458 Trifolium pratense
TPR.G14461 Trifolium pratense
TPR.G14463 Trifolium pratense
TPR.G14464 Trifolium pratense
TPR.G31823 Trifolium pratense
TPR.G31825 Trifolium pratense
TPR.G31834 Trifolium pratense
TPR.G31841 Trifolium pratense
TPR.G34828 Trifolium pratense
TPR.G34840 Trifolium pratense
TPR.G34841 Trifolium pratense
TPR.G34844 Trifolium pratense
TPR.G35856 Trifolium pratense
TPR.G35858 Trifolium pratense
TPR.G7996 Trifolium pratense
TPR.G8905 Trifolium pratense
TWI36G0354 Tripterygium wilfordii
TWI75G1445 Tripterygium wilfordii
vmacro09290 Vaccinium macrocarpon
vmacro09291 Vaccinium macrocarpon
vmacro09346 Vaccinium macrocarpon
vmacro09347 Vaccinium macrocarpon
vmacro09351 Vaccinium macrocarpon
vmacro12179 Vaccinium macrocarpon
vmacro17283 Vaccinium macrocarpon
vmacro18801 Vaccinium macrocarpon
VMungo0540G0356 Vigna mungo
VMungo0540G0624 Vigna mungo
VMungo0647G0102 Vigna mungo
VMungo0647G1520 Vigna mungo
Zm00001eb037080 Zea mays
Zm00001eb318070 Zea mays

User provided reference genes

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