Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36550 Brassica napus
A02p03660 Brassica napus
A02p23900 Brassica napus
A04p21830 Brassica napus
A05p31970 Brassica napus
A05p44220 Brassica napus
A06p28630 Brassica napus
A08p04670 Brassica napus
A08p09750 Brassica napus
A10p22620 Brassica napus
Aa31LG10G5310 Aethionema arabicum
Aa31LG11G13070 Aethionema arabicum
Aa31LG5G13360 Aethionema arabicum
Aa31LG8G4720 Aethionema arabicum
Actinidia06491 Actinidia chinensis
Actinidia09073 Actinidia chinensis
Actinidia12385 Actinidia chinensis
Actinidia17208 Actinidia chinensis
Actinidia36636 Actinidia chinensis
Ah.05g171550 Amaranthus hybridus
Ah.10g032390 Amaranthus hybridus
Ah.12g060140 Amaranthus hybridus
AL1G55130 Arabidopsis lyrata
AL3G12310 Arabidopsis lyrata
AL3G31000 Arabidopsis lyrata
AL7G52670 Arabidopsis lyrata
AL7G52680 Arabidopsis lyrata
Aqoxy3G00043 Aquilegia oxysepala
Aqoxy3G04081 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GW18HV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HD065W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3UWNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JDCB79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NWC6K7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TS2VTY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNZ83X Arachis hypogaea
AT1G48480 Arabidopsis thaliana
AT3G02880 Arabidopsis thaliana
AT3G17840 Arabidopsis thaliana
AT5G16590 Arabidopsis thaliana
ATR0564G347 Amborella trichopoda
ATR1131G049 Amborella trichopoda
Atru.chr1.2000 Acer truncatum
Atru.chr9.1640 Acer truncatum
AUR62014373 Chenopodium quinoa
AUR62018220 Chenopodium quinoa
AUR62019115 Chenopodium quinoa
AUR62037794 Chenopodium quinoa
BcaB04g17419 Brassica carinata
BcaB04g20812 Brassica carinata
BcaB04g21403 Brassica carinata
BcaB06g25848 Brassica carinata
BcaB08g36837 Brassica carinata
BcaC01g05255 Brassica carinata
BcaC03g18503 Brassica carinata
BcaC04g18865 Brassica carinata
BcaC05g28749 Brassica carinata
BcaC05g28751 Brassica carinata
BcaC05g30497 Brassica carinata
BcaC07g37132 Brassica carinata
BcaC09g48745 Brassica carinata
BcaNung04313 Brassica carinata
BNapus_Darmor_BZH_scaffold_122p00300 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00320 Brassica napus
BolC1t04598H Brassica oleracea
BolC1t05450H Brassica oleracea
BolC1t05868H Brassica oleracea
BolC2t06763H Brassica oleracea
BolC5t33586H Brassica oleracea
BolC5t35055H Brassica oleracea
BolC9t58888H Brassica oleracea
BraA01t03718Z Brassica rapa
BraA01t04612Z Brassica rapa
BraA02t05334Z Brassica rapa
BraA05t22028Z Brassica rapa
BraA06t23279Z Brassica rapa
BraA08t32381Z Brassica rapa
BraA08t32498Z Brassica rapa
BraA08t32968Z Brassica rapa
BraA10t44324Z Brassica rapa
C01p46380 Brassica napus
C02p08460 Brassica napus
C05p48510 Brassica napus
C08p05030 Brassica napus
C09p60570 Brassica napus
C09p76020 Brassica napus
CAN.G1096.2 Capsicum annuum
CAN.G1100.4 Capsicum annuum
CAN.G222.39 Capsicum annuum
CAN.G423.37 Capsicum annuum
CAN.G843.38 Capsicum annuum
CAN.G86.32 Capsicum annuum
CANSAT80G1218 Cannabis sativa
CANSAT80G2612 Cannabis sativa
CARHR038110 Cardamine hirsuta
CARHR076900 Cardamine hirsuta
CARHR093190 Cardamine hirsuta
CARHR196630 Cardamine hirsuta
Carub.0001s3761 Capsella rubella
Carub.0003s0199 Capsella rubella
Carub.0003s1755 Capsella rubella
Carub.0006s1479 Capsella rubella
Ca_05832_v3 Cicer arietinum L.
Ca_17177_v3 Cicer arietinum L.
Ca_25349_v3 Cicer arietinum L.
Cc03_g05280 Coffea canephora
Cc04_g06040 Coffea canephora
Cc07_g13350 Coffea canephora
Cc11_g07990 Coffea canephora
CDE02G0609 Ceratophyllum demersum
CDE02G2505 Ceratophyllum demersum
CDE05G0665 Ceratophyllum demersum
CDE05G0804 Ceratophyllum demersum
CDE05G1351 Ceratophyllum demersum
CDE05G2174 Ceratophyllum demersum
CDE05G2219 Ceratophyllum demersum
CDE05G2230 Ceratophyllum demersum
CDE06G0344 Ceratophyllum demersum
CDE07G0173 Ceratophyllum demersum
CDE11G0163 Ceratophyllum demersum
Cfa007799 Carpinus fangiana
Cfa019625 Carpinus fangiana
Ciclev10007673m.g Citrus clementina
Ciclev10011289m.g Citrus clementina
CiPaw.03G072800 Carya illinoinensis
CiPaw.15G145400 Carya illinoinensis
CiPaw.16G096800 Carya illinoinensis
ClCG04G010510 Citrullus lanatus
ClCG05G011410 Citrullus lanatus
COL.COLO4_13428 Corchorus olitorius
COL.COLO4_28872 Corchorus olitorius
Cpa.g.sc116.64 Carica papaya
Cpa.g.sc3.371 Carica papaya
CsaV3_1G004950 Cucumis sativus L.
CsaV3_1G007270 Cucumis sativus L.
CsaV3_3G021010 Cucumis sativus L.
CSS0001319 Camellia sinensis var. sinensis
CSS0005798 Camellia sinensis var. sinensis
CSS0011821 Camellia sinensis var. sinensis
CSS0012781 Camellia sinensis var. sinensis
CSS0022975 Camellia sinensis var. sinensis
CSS0024132 Camellia sinensis var. sinensis
CSS0025624 Camellia sinensis var. sinensis
CSS0038175 Camellia sinensis var. sinensis
DCAR_003427 Daucus carota
DCAR_003536 Daucus carota
DCAR_007324 Daucus carota
DCAR_011622 Daucus carota
DCAR_011652 Daucus carota
DCAR_014170 Daucus carota
Dinv06371 Davidia involucrata
Dinv06372 Davidia involucrata
Dinv18643 Davidia involucrata
Dinv19040 Davidia involucrata
Dinv19282 Davidia involucrata
Dinv26258 Davidia involucrata
Dinv28072 Davidia involucrata
Dinv28190 Davidia involucrata
Duzib068G0670 Durio zibethinus
Duzib084G0064 Durio zibethinus
Duzib138G0952 Durio zibethinus
Duzib205G1822 Durio zibethinus
ECA233G3398 Erigeron canadensis
ECA233G5322 Erigeron canadensis
ECA246G2696 Erigeron canadensis
EL10Ac1g00484 Beta vulgaris
EL10Ac2g03180 Beta vulgaris
Eucgr.F02867 Eucalyptus grandis
Eucgr.H00539 Eucalyptus grandis
Eucgr.J01604 Eucalyptus grandis
Eucgr.K02280 Eucalyptus grandis
FAN04G0202 Fragaria x ananassa
FAN08G1308 Fragaria x ananassa
FAN13G2977 Fragaria x ananassa
FAN18G4550 Fragaria x ananassa
FAN20G2106 Fragaria x ananassa
FAN24G0238 Fragaria x ananassa
FvH4_2g12190 Fragaria vesca
FvH4_5g17570 Fragaria vesca
Glyma.02G244400 Glycine max
Glyma.05G247300 Glycine max
Glyma.07G103500 Glycine max
Glyma.08G055700 Glycine max
Glyma.09G173800 Glycine max
Glyma.14G214700 Glycine max
Gohir.A03G092200 Gossypium hirsutum
Gohir.A07G072800 Gossypium hirsutum
Gohir.A07G164800 Gossypium hirsutum
Gohir.A07G176400 Gossypium hirsutum
Gohir.A11G167400 Gossypium hirsutum
Gohir.D02G121000 Gossypium hirsutum
Gohir.D07G077400 Gossypium hirsutum
Gohir.D07G183500 Gossypium hirsutum
Gohir.D11G173700 Gossypium hirsutum
Gorai.001G081900 Gossypium raimondii
Gorai.001G198100 Gossypium raimondii
Gorai.001G203900 Gossypium raimondii
Gorai.005G133200 Gossypium raimondii
Gorai.007G186000 Gossypium raimondii
GSVIVG01008472001 Vitis vinifera
GSVIVG01011677001 Vitis vinifera
GSVIVG01030793001 Vitis vinifera
HanXRQChr05g0142651 Helianthus annuus
HanXRQChr08g0212451 Helianthus annuus
HanXRQChr12g0355821 Helianthus annuus
HanXRQChr15g0486271 Helianthus annuus
Haze_14273 Corylus avellana
Haze_18898 Corylus avellana
Hma1.2p1_0158F.1_g070110 Hydrangea macrophylla
Hma1.2p1_0163F.1_g072920 Hydrangea macrophylla
Hma1.2p1_0471F.1_g159580 Hydrangea macrophylla
HPP92_009637 Vanilla planifolia
HPP92_021278 Vanilla planifolia
HPP92_021292 Vanilla planifolia
HPP92_024802 Vanilla planifolia
HPP92_024809 Vanilla planifolia
Hund13097 Selenicereus undatus
Hund17265 Selenicereus undatus
Hund26827 Selenicereus undatus
Lalb_Chr04g0251421 Lupinus albus
Lalb_Chr05g0221551 Lupinus albus
Lalb_Chr09g0330301 Lupinus albus
Lalb_Chr10g0104311 Lupinus albus
Lalb_Chr16g0386931 Lupinus albus
Lalb_Chr17g0346071 Lupinus albus
Lj2g0002405 Lotus japonicus
Lj2g0006395 Lotus japonicus
Lj2g0019149 Lotus japonicus
Lj3g0000898 Lotus japonicus
Lj4A261G31 Lonicera japonica
Lj5C160T13 Lonicera japonica
Lj6A740G47 Lonicera japonica
Lj8C88G1 Lonicera japonica
Lj9C417T3 Lonicera japonica
LjContig00141g0023912 Lotus japonicus
Lsat_1_v5_gn_3_65021 Lactuca sativa
Lsat_1_v5_gn_8_115640 Lactuca sativa
Lsat_1_v5_gn_8_340 Lactuca sativa
Lsat_1_v5_gn_8_45681 Lactuca sativa
Manes.01G118900 Manihot esculenta
Manes.02G077600 Manihot esculenta
Manes.06G003700 Manihot esculenta
Manes.14G172700 Manihot esculenta
MBI13_g16780_MAGBIO Magnolia biondii
MBI13_g40861_MAGBIO Magnolia biondii
MBI19_g14523_MAGBIO Magnolia biondii
MD02G1259100 Malus domestica
MD06G1231600 Malus domestica
MD09G1086600 Malus domestica
MD09G1271200 Malus domestica
MD14G1238300 Malus domestica
MD17G1269300 Malus domestica
Medtr5g078080 Medicago truncatula
Medtr6g470960 Medicago truncatula
Medtr8g107470 Medicago truncatula
MELO3C002144.2 Cucumis melo
MELO3C020229.2 Cucumis melo
Migut.E00466 Erythranthe guttata
Migut.H02257 Erythranthe guttata
Migut.K00909 Erythranthe guttata
Migut.K00910 Erythranthe guttata
Migut.L00364 Erythranthe guttata
Migut.L00539 Erythranthe guttata
MSTRG.11238 Avicennia marina
MSTRG.23394 Avicennia marina
MSTRG.2622 Avicennia marina
MSTRG.4634 Avicennia marina
Nitab4.5_0000201g0100 Nicotiana tabacum
Nitab4.5_0001841g0150 Nicotiana tabacum
Nitab4.5_0002046g0100 Nicotiana tabacum
Nitab4.5_0002450g0130 Nicotiana tabacum
Nitab4.5_0005102g0090 Nicotiana tabacum
Nitab4.5_0006176g0010 Nicotiana tabacum
Nn3g18332 Nelumbo nucifera
Nn4g24309 Nelumbo nucifera
Oeu015099.1 Olea europaea
Oeu031145.1 Olea europaea
Oeu040745.1 Olea europaea
Oeu046619.1 Olea europaea
Oeu063577.1 Olea europaea
Os03g0223000 Oryza sativa ssp. japonica
Os03g0712400 Oryza sativa ssp. japonica
Os04g0463000 Oryza sativa ssp. japonica
Os08g0427600 Oryza sativa ssp. japonica
Peaxi162Scf00207g00145 Petunia axillaris
Peaxi162Scf00305g00005 Petunia axillaris
Peaxi162Scf00314g00426 Petunia axillaris
Peaxi162Scf00376g00329 Petunia axillaris
PGR042G1738 Punica granatum
PGR044G2209 Punica granatum
PGR083G0442 Punica granatum
PGSC0003DMG400003429 Solanum tuberosum
PGSC0003DMG400015666 Solanum tuberosum
PGSC0003DMG400028801 Solanum tuberosum
PGSC0003DMG402014186 Solanum tuberosum
Phvul.002G331400 Phaseolus vulgaris
Phvul.004G149100 Phaseolus vulgaris
Phvul.008G236900 Phaseolus vulgaris
Potri.004G086100 Populus trichocarpa
Potri.012G044600 Populus trichocarpa
Potri.015G035500 Populus trichocarpa
Potri.017G130600 Populus trichocarpa
Prupe.3G017300 Prunus persica
Prupe.5G235500 Prunus persica
Psat1g030520 Pisum sativum
Psat2g046520 Pisum sativum
Psat6g127080 Pisum sativum
Psat7g000920 Pisum sativum
PSO017G4796 Papaver somniferum
PSO478G1491 Papaver somniferum
QL02p058458 Quercus lobata
QL10p014252 Quercus lobata
QL10p031204 Quercus lobata
RcHm_v2.0_Chr3g0491091 Rosa chinensis
RcHm_v2.0_Chr7g0178081 Rosa chinensis
Rhsim08G0019100 Rhododendron simsii
Rhsim09G0091700 Rhododendron simsii
Rhsim10G0177900 Rhododendron simsii
Sabra04G0056900 Salix brachista
Sabra04G0057000 Salix brachista
Sabra15G0029300 Salix brachista
Sabra17G0108700 Salix brachista
SalBow1G7847 Salvia bowleyana
SalBow2G0031 Salvia bowleyana
SalBow3G0138 Salvia bowleyana
SalBow5G2494 Salvia bowleyana
Sc08g0002930 Simmondsia chinensis
Sc10g0009110 Simmondsia chinensis
Sc10g0009120 Simmondsia chinensis
Sed0000716 Sechium edule
Sed0008776 Sechium edule
Sed0019518 Sechium edule
Sed0021364 Sechium edule
SEGI_00798 Sequoiadendron giganteum
SEGI_19771 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30958 Striga asiatica
SGA_v2.0_scaffold115G32120 Striga asiatica
SGA_v2.0_scaffold139G35401 Striga asiatica
SGA_v2.0_scaffold2G00944 Striga asiatica
SGA_v2.0_scaffold40G15673 Striga asiatica
SGA_v2.0_scaffold74G24658 Striga asiatica
SHI19067 Sapria himalayana
Solyc01g067020.4 Solanum lycopersicum
Solyc03g118510.3 Solanum lycopersicum
Solyc06g068910.3 Solanum lycopersicum
Solyc11g011020.2 Solanum lycopersicum
Sopen01g028710 Solanum pennellii
Sopen03g037390 Solanum pennellii
Sopen06g026200 Solanum pennellii
Sopen11g005790 Solanum pennellii
Sp1g35430 Schrenkiella parvula
Sp3g01920 Schrenkiella parvula
Sp3g15960 Schrenkiella parvula
Sp6g27580 Schrenkiella parvula
TAR371G1035 Trochodendron aralioides
TAR629G2864 Trochodendron aralioides
TAR629G3473 Trochodendron aralioides
THA.LOC104802939 Tarenaya hassleriana
THA.LOC104820338 Tarenaya hassleriana
THA.LOC104821827 Tarenaya hassleriana
THA.LOC104827187 Tarenaya hassleriana
Thecc.03G059900 Theobroma cacao
Thecc.04G054300 Theobroma cacao
Thhalv10011300m.g Eutrema salsugineum
Thhalv10012966m.g Eutrema salsugineum
Thhalv10020262m.g Eutrema salsugineum
Thhalv10020304m.g Eutrema salsugineum
TPR.G18642 Trifolium pratense
TPR.G25361 Trifolium pratense
TPR.G8283 Trifolium pratense
TWI15G0164 Tripterygium wilfordii
TWI53G0118 Tripterygium wilfordii
TWI60G1319 Tripterygium wilfordii
TWI77G0933 Tripterygium wilfordii
TWI81G0543 Tripterygium wilfordii
vmacro07706 Vaccinium macrocarpon
vmacro10689 Vaccinium macrocarpon
vmacro18528 Vaccinium macrocarpon
VMungo0251G1163 Vigna mungo
VMungo0464G1903 Vigna mungo
VMungo0647G2205 Vigna mungo
Zm00001eb054960 Zea mays
Zm00001eb080550 Zea mays
Zm00001eb216290 Zea mays
Zm00001eb399890 Zea mays
Zm00001eb399900 Zea mays

User provided reference genes

Program Settings