Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10330 Brassica napus
A02p43090 Brassica napus
A02p43100 Brassica napus
A03p48690 Brassica napus
A06p21670 Brassica napus
A06p30600 Brassica napus
A06p30610 Brassica napus
A06p30620 Brassica napus
A08p33290 Brassica napus
A09p08500 Brassica napus
A10p11650 Brassica napus
Aa31LG1G17920 Aethionema arabicum
Aa31LG3G10330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3377 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4235 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4236 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1404 Anthoceros agrestis
Actinidia01386 Actinidia chinensis
Actinidia01923 Actinidia chinensis
Actinidia18753 Actinidia chinensis
Actinidia35270 Actinidia chinensis
Actinidia38866 Actinidia chinensis
Ah.04g165010 Amaranthus hybridus
Ah.14g089050 Amaranthus hybridus
AL6G19680 Arabidopsis lyrata
AL8G29730 Arabidopsis lyrata
AL8G41240 Arabidopsis lyrata
AL8G41250 Arabidopsis lyrata
AL8G41260 Arabidopsis lyrata
Aqoxy1G01118 Aquilegia oxysepala
Aqoxy1G02660 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1HMN83 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6IT3ID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BK4CWA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT4TLX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZ18QW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NC667I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PYCR2I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4QVWL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z42PVZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8HAGL Arachis hypogaea
AT5G09290 Arabidopsis thaliana
AT5G54390 Arabidopsis thaliana
AT5G63980 Arabidopsis thaliana
AT5G63990 Arabidopsis thaliana
AT5G64000 Arabidopsis thaliana
ATR0584G033 Amborella trichopoda
ATR0693G320 Amborella trichopoda
Atru.chr10.1979 Acer truncatum
Atru.chr2.2814 Acer truncatum
Atru.chr4.879 Acer truncatum
AUR62003581 Chenopodium quinoa
AUR62014747 Chenopodium quinoa
AUR62015617 Chenopodium quinoa
AUR62016925 Chenopodium quinoa
AUR62017891 Chenopodium quinoa
AUR62017894 Chenopodium quinoa
AUR62029328 Chenopodium quinoa
AUR62029340 Chenopodium quinoa
AUR62043727 Chenopodium quinoa
BcaB05g22131 Brassica carinata
BcaB07g29712 Brassica carinata
BcaB07g29714 Brassica carinata
BcaB08g35793 Brassica carinata
BcaC01g02653 Brassica carinata
BcaC03g14320 Brassica carinata
BcaC03g18235 Brassica carinata
BcaC03g18236 Brassica carinata
BcaC04g20341 Brassica carinata
BolC2t07804H Brassica oleracea
BolC2t12379H Brassica oleracea
BolC2t12380H Brassica oleracea
BolC3t18496H Brassica oleracea
BolC9t53874H Brassica oleracea
BolC9t57345H Brassica oleracea
BraA02t06100Z Brassica rapa
BraA06t25256Z Brassica rapa
BraA06t26012Z Brassica rapa
BraA09t36499Z Brassica rapa
BraA10t43260Z Brassica rapa
C02p17060 Brassica napus
C02p63060 Brassica napus
C02p63070 Brassica napus
C03p62340 Brassica napus
C03p62350 Brassica napus
C03p62360 Brassica napus
C09p09630 Brassica napus
C09p44720 Brassica napus
CAN.G1156.49 Capsicum annuum
CAN.G1181.1 Capsicum annuum
CAN.G433.19 Capsicum annuum
CANSAT01G0170 Cannabis sativa
CANSAT56G1894 Cannabis sativa
CARHR204120 Cardamine hirsuta
CARHR267670 Cardamine hirsuta
CARHR277900 Cardamine hirsuta
CARHR277910 Cardamine hirsuta
CARHR277920 Cardamine hirsuta
Carub.0006s0784 Capsella rubella
Carub.0008s1472 Capsella rubella
Carub.0008s2476 Capsella rubella
Carub.0008s2477 Capsella rubella
Carub.0008s2478 Capsella rubella
Ca_00275_v3 Cicer arietinum L.
Ca_18248_v3 Cicer arietinum L.
Ca_23097_v3 Cicer arietinum L.
CBR_g10965 Chara braunii
CBR_g427 Chara braunii
Cc02_g12650 Coffea canephora
Cc05_g12560 Coffea canephora
Cc07_g18630 Coffea canephora
CDE04G3754 Ceratophyllum demersum
CDE12G0704 Ceratophyllum demersum
Cfa000374 Carpinus fangiana
Cfa001633 Carpinus fangiana
Cfa002905 Carpinus fangiana
Ciclev10001463m.g Citrus clementina
Ciclev10008644m.g Citrus clementina
Ciclev10015112m.g Citrus clementina
CiPaw.03G120600 Carya illinoinensis
CiPaw.09G159900 Carya illinoinensis
CiPaw.11G174700 Carya illinoinensis
ClCG01G015360 Citrullus lanatus
ClCG03G005600 Citrullus lanatus
ClCG11G018360 Citrullus lanatus
COL.COLO4_09462 Corchorus olitorius
COL.COLO4_31551 Corchorus olitorius
COL.COLO4_35760 Corchorus olitorius
Cpa.g.sc2554.1 Carica papaya
Cpa.g.sc27.102 Carica papaya
Cpa.g.sc42.165 Carica papaya
Cre01.g030250 Chlamydomonas reinhardtii
CsaV3_1G011860 Cucumis sativus L.
CsaV3_3G044460 Cucumis sativus L.
CsaV3_6G041580 Cucumis sativus L.
CSS0011776 Camellia sinensis var. sinensis
CSS0015291 Camellia sinensis var. sinensis
CSS0018393 Camellia sinensis var. sinensis
CSS0018704 Camellia sinensis var. sinensis
DCAR_001208 Daucus carota
DCAR_008064 Daucus carota
DCAR_017157 Daucus carota
Dinv07109 Davidia involucrata
Dinv08331 Davidia involucrata
Dinv20761 Davidia involucrata
Dinv24378 Davidia involucrata
Dinv24765 Davidia involucrata
Dinv39795 Davidia involucrata
Dinv40511 Davidia involucrata
Duzib187G0114 Durio zibethinus
Duzib192G0604 Durio zibethinus
Duzib213G0651 Durio zibethinus
Duzib235G1189 Durio zibethinus
Duzib264G0434 Durio zibethinus
ECA234G2407 Erigeron canadensis
ECA236G0140 Erigeron canadensis
EL10Ac4g08088 Beta vulgaris
EL10Ac8g20633 Beta vulgaris
Eucgr.F03343 Eucalyptus grandis
Eucgr.G00577 Eucalyptus grandis
Eucgr.I00195 Eucalyptus grandis
FAN11G0341 Fragaria x ananassa
FAN11G2753 Fragaria x ananassa
FAN16G1788 Fragaria x ananassa
FAN16G2544 Fragaria x ananassa
FAN19G1763 Fragaria x ananassa
FAN21G0587 Fragaria x ananassa
FAN21G3488 Fragaria x ananassa
FAN23G1742 Fragaria x ananassa
FAN25G1363 Fragaria x ananassa
FAN25G3062 Fragaria x ananassa
FAN28G0182 Fragaria x ananassa
FvH4_1g24470 Fragaria vesca
FvH4_3g04430 Fragaria vesca
FvH4_3g20770 Fragaria vesca
Glyma.05G132200 Glycine max
Glyma.06G249500 Glycine max
Glyma.07G191500 Glycine max
Glyma.08G086800 Glycine max
Glyma.12G148400 Glycine max
Glyma.13G185200 Glycine max
Glyma.13G244900 Glycine max
Glyma.15G068800 Glycine max
Gohir.A01G067300 Gossypium hirsutum
Gohir.A04G103533 Gossypium hirsutum
Gohir.A04G103566 Gossypium hirsutum
Gohir.A05G256500 Gossypium hirsutum
Gohir.A06G123800 Gossypium hirsutum
Gohir.A09G004400 Gossypium hirsutum
Gohir.A09G019900 Gossypium hirsutum
Gohir.A10G022200 Gossypium hirsutum
Gohir.A10G156800 Gossypium hirsutum
Gohir.D01G054500 Gossypium hirsutum
Gohir.D06G128700 Gossypium hirsutum
Gohir.D09G003900 Gossypium hirsutum
Gohir.D09G019500 Gossypium hirsutum
Gohir.D10G023000 Gossypium hirsutum
Gohir.D10G108800 Gossypium hirsutum
Gorai.002G074400 Gossypium raimondii
Gorai.006G005300 Gossypium raimondii
Gorai.006G022900 Gossypium raimondii
Gorai.010G150200 Gossypium raimondii
Gorai.011G024100 Gossypium raimondii
Gorai.011G119100 Gossypium raimondii
GSVIVG01005836001 Vitis vinifera
GSVIVG01014412001 Vitis vinifera
GSVIVG01026471001 Vitis vinifera
HanXRQChr09g0259741 Helianthus annuus
HanXRQChr15g0494501 Helianthus annuus
HanXRQChr16g0517931 Helianthus annuus
Haze_06551 Corylus avellana
Haze_25258 Corylus avellana
Hma1.2p1_0144F.1_g065020 Hydrangea macrophylla
Hma1.2p1_0539F.1_g174620 Hydrangea macrophylla
HPP92_005670 Vanilla planifolia
HPP92_013157 Vanilla planifolia
Hund04427 Selenicereus undatus
Hund27429 Selenicereus undatus
Hund27430 Selenicereus undatus
Lalb_Chr05g0218251 Lupinus albus
Lalb_Chr07g0188391 Lupinus albus
Lalb_Chr15g0090021 Lupinus albus
Lalb_Chr19g0134381 Lupinus albus
Lj1A1211T72 Lonicera japonica
Lj1A851G60 Lonicera japonica
Lj2A282T44 Lonicera japonica
Lj3g0001024 Lotus japonicus
Lj4C836T4 Lonicera japonica
Lj4g0003458 Lotus japonicus
Lj4g0016822 Lotus japonicus
Lj4g0024750 Lotus japonicus
Lj6g0007265 Lotus japonicus
Lsat_1_v5_gn_4_137741 Lactuca sativa
Lsat_1_v5_gn_4_56081 Lactuca sativa
Lsat_1_v5_gn_7_106201 Lactuca sativa
Manes.03G115100 Manihot esculenta
Manes.12G156600 Manihot esculenta
Manes.16G022600 Manihot esculenta
Mapoly0030s0063 Marchantia polymorpha
Mapoly0068s0099 Marchantia polymorpha
MBI02_g39535_MAGBIO Magnolia biondii
MBI06_g27446_MAGBIO Magnolia biondii
MCO07G303 Micromonas commoda
MCO08G277 Micromonas commoda
MD01G1008900 Malus domestica
MD03G1221700 Malus domestica
MD05G1323300 Malus domestica
MD10G1301100 Malus domestica
MD11G1239100 Malus domestica
Medtr2g012510 Medicago truncatula
Medtr4g090525 Medicago truncatula
Medtr4g094672 Medicago truncatula
Medtr8g464260 Medicago truncatula
MELO3C002563.2 Cucumis melo
MELO3C008062.2 Cucumis melo
MELO3C018215.2 Cucumis melo
Migut.H00694 Erythranthe guttata
Migut.H01495 Erythranthe guttata
Migut.L00670 Erythranthe guttata
Migut.M00866 Erythranthe guttata
MSTRG.14695 Avicennia marina
MSTRG.2644 Avicennia marina
MSTRG.6848 Avicennia marina
Nitab4.5_0000496g0090 Nicotiana tabacum
Nitab4.5_0000662g0040 Nicotiana tabacum
Nitab4.5_0001610g0010 Nicotiana tabacum
Nitab4.5_0003114g0090 Nicotiana tabacum
Nitab4.5_0006694g0030 Nicotiana tabacum
Nitab4.5_0006981g0010 Nicotiana tabacum
Nn1g03945 Nelumbo nucifera
Nn1g06698 Nelumbo nucifera
Nn3g17606 Nelumbo nucifera
Nn5g28512 Nelumbo nucifera
Oeu004238.1 Olea europaea
Oeu008024.1 Olea europaea
Oeu028416.1 Olea europaea
Oeu031649.1 Olea europaea
Oeu053966.2 Olea europaea
Oeu055675.1 Olea europaea
Oeu058291.1 Olea europaea
Os02g0805500 Oryza sativa ssp. japonica
Os12g0183200 Oryza sativa ssp. japonica
Os12g0183300 Oryza sativa ssp. japonica
Peaxi162Scf00000g00498 Petunia axillaris
Peaxi162Scf00525g00018 Petunia axillaris
PGR004G1129 Punica granatum
PGR031G3797 Punica granatum
PGR119G0884 Punica granatum
PGSC0003DMG400008568 Solanum tuberosum
PGSC0003DMG400022370 Solanum tuberosum
PGSC0003DMG400023321 Solanum tuberosum
PGSC0003DMG400030007 Solanum tuberosum
Phvul.002G190600 Phaseolus vulgaris
Phvul.002G223600 Phaseolus vulgaris
Phvul.006G190400 Phaseolus vulgaris
Phvul.011G148400 Phaseolus vulgaris
Potri.004G036400 Populus trichocarpa
Potri.005G063900 Populus trichocarpa
Potri.007G105100 Populus trichocarpa
Potri.011G044900 Populus trichocarpa
Potri.011G124700 Populus trichocarpa
Pp3c13_15690 Physcomitrium patens
Pp3c15_5590 Physcomitrium patens
Pp3c3_21240 Physcomitrium patens
PRCOL_00004535 Prasinoderma coloniale
Prupe.4G039300 Prunus persica
Prupe.4G187800 Prunus persica
Prupe.4G272000 Prunus persica
Psat1g207680 Pisum sativum
Psat4g173160 Pisum sativum
Psat7g088480 Pisum sativum
Psat7g111200 Pisum sativum
PSO170G6694 Papaver somniferum
PSO528G0154 Papaver somniferum
QL05p038543 Quercus lobata
QL08p019034 Quercus lobata
QL10p043423 Quercus lobata
RcHm_v2.0_Chr2g0121661 Rosa chinensis
RcHm_v2.0_Chr2g0121731 Rosa chinensis
RcHm_v2.0_Chr5g0006821 Rosa chinensis
RcHm_v2.0_Chr5g0035001 Rosa chinensis
Rhsim04G0018700 Rhododendron simsii
Rhsim08G0002400 Rhododendron simsii
Rhsim13G0175000 Rhododendron simsii
Sabra05G0053200 Salix brachista
Sabra11G0031200 Salix brachista
Sabra11G0109400 Salix brachista
SalBow1G4172 Salvia bowleyana
SalBow1G4616 Salvia bowleyana
SalBow7G2402 Salvia bowleyana
SalBow8G0378 Salvia bowleyana
Sc06g0003860 Simmondsia chinensis
Sc07g0001800 Simmondsia chinensis
Sed0002135 Sechium edule
Sed0005361 Sechium edule
Sed0023425 Sechium edule
SEGI_00795 Sequoiadendron giganteum
SEGI_26343 Sequoiadendron giganteum
SEGI_37268 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37645 Striga asiatica
SGA_v2.0_scaffold370G50110 Striga asiatica
SGA_v2.0_scaffold73G24306 Striga asiatica
SHI11462 Sapria himalayana
SHI30977 Sapria himalayana
SHI33332 Sapria himalayana
SHI34788 Sapria himalayana
SHI49793 Sapria himalayana
SMO134G0102 Selaginella moellendorffii
SMO200G0062 Selaginella moellendorffii
Solyc02g078860.3 Solanum lycopersicum
Solyc05g056490.4 Solanum lycopersicum
Solyc12g013560.2 Solanum lycopersicum
Sopen02g023680 Solanum pennellii
Sopen05g034890 Solanum pennellii
Sopen12g006920 Solanum pennellii
Sp2g27050 Schrenkiella parvula
Sp2g27060 Schrenkiella parvula
Sp2g27070 Schrenkiella parvula
Sp6g16400 Schrenkiella parvula
TAR381G0336 Trochodendron aralioides
TAR624G0534 Trochodendron aralioides
TAR625G0855 Trochodendron aralioides
TAR626G0779 Trochodendron aralioides
THA.LOC104800114 Tarenaya hassleriana
THA.LOC104811851 Tarenaya hassleriana
THA.LOC104813658 Tarenaya hassleriana
THA.LOC104818427 Tarenaya hassleriana
THA.LOC104819342 Tarenaya hassleriana
Thecc.01G134000 Theobroma cacao
Thecc.06G196000 Theobroma cacao
Thecc.07G074400 Theobroma cacao
Thhalv10004312m.g Eutrema salsugineum
Thhalv10004421m.g Eutrema salsugineum
Thhalv10004505m.g Eutrema salsugineum
Thhalv10013845m.g Eutrema salsugineum
Thhalv10013884m.g Eutrema salsugineum
TPR.G2929 Trifolium pratense
TPR.G29366 Trifolium pratense
TPR.G32404 Trifolium pratense
TPR.G36821 Trifolium pratense
TWI38G0457 Tripterygium wilfordii
TWI38G0548 Tripterygium wilfordii
TWI39G1022 Tripterygium wilfordii
TWI79G1082 Tripterygium wilfordii
unitig_899.g14679 Utricularia gibba
vmacro09549 Vaccinium macrocarpon
vmacro18671 Vaccinium macrocarpon
vmacro22274 Vaccinium macrocarpon
vmacro22276 Vaccinium macrocarpon
VMungo0251G1464 Vigna mungo
VMungo0251G2364 Vigna mungo
VMungo0540G2005 Vigna mungo
VMungo1127G0935 Vigna mungo
Zm00001eb192000 Zea mays
Zm00001eb409060 Zea mays
Zm00001eb409080 Zea mays

User provided reference genes

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