Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25390 Brassica napus
A01p25400 Brassica napus
A03p48860 Brassica napus
A04p06980 Brassica napus
A06p19590 Brassica napus
A09p45460 Brassica napus
A09p45470 Brassica napus
Aa31LG10G7470 Aethionema arabicum
Aa31LG4G16710 Aethionema arabicum
Actinidia04953 Actinidia chinensis
Actinidia06582 Actinidia chinensis
Actinidia20039 Actinidia chinensis
Actinidia37691 Actinidia chinensis
Ah.02g112840 Amaranthus hybridus
Ah.06g191090 Amaranthus hybridus
AL5G27410 Arabidopsis lyrata
AL5G27420 Arabidopsis lyrata
AL5G33080 Arabidopsis lyrata
Aqoxy253s003 Aquilegia oxysepala
Aqoxy3G03148 Aquilegia oxysepala
Aqoxy6G00324 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3E8U0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A0TJ2P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2IS88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5RNX8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6P520 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VGZ3RK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XF1RPZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea
AT3G48080 Arabidopsis thaliana
AT3G48090 Arabidopsis thaliana
AT3G52430 Arabidopsis thaliana
ATR0950G012 Amborella trichopoda
ATR1128G061 Amborella trichopoda
Atru.chr4.1002 Acer truncatum
Atru.chr4.1003 Acer truncatum
Atru.chr9.2387 Acer truncatum
AUR62000526 Chenopodium quinoa
AUR62006871 Chenopodium quinoa
AUR62008298 Chenopodium quinoa
AUR62031060 Chenopodium quinoa
BcaB01g00371 Brassica carinata
BcaB01g00846 Brassica carinata
BcaB02g08570 Brassica carinata
BcaB02g09440 Brassica carinata
BcaB05g22906 Brassica carinata
BcaB05g22909 Brassica carinata
BcaC02g09259 Brassica carinata
BcaC02g11637 Brassica carinata
BcaC06g32912 Brassica carinata
BcaC06g33388 Brassica carinata
BcaC07g39291 Brassica carinata
BcaC07g39604 Brassica carinata
BcaC07g39605 Brassica carinata
BcaC09g49841 Brassica carinata
BcaC09g49843 Brassica carinata
BolC1t03170H Brassica oleracea
BolC1t03171H Brassica oleracea
BolC4t25640H Brassica oleracea
BolC7t45211H Brassica oleracea
BolC8t49937H Brassica oleracea
BolC8t50383H Brassica oleracea
BolC8t50385H Brassica oleracea
BolC8t50386H Brassica oleracea
BraA01t02482Z Brassica rapa
BraA01t02483Z Brassica rapa
BraA03t13987Z Brassica rapa
BraA04t16396Z Brassica rapa
BraA04t16397Z Brassica rapa
BraA06t25039Z Brassica rapa
BraA08t32206Z Brassica rapa
BraA09t40007Z Brassica rapa
BraA09t40008Z Brassica rapa
C01p31800 Brassica napus
C01p31820 Brassica napus
C01p31830 Brassica napus
C04p40610 Brassica napus
C07p46950 Brassica napus
C08p22990 Brassica napus
C08p27630 Brassica napus
C08p27640 Brassica napus
CAN.G39.5 Capsicum annuum
CAN.G628.65 Capsicum annuum
CANSAT01G1052 Cannabis sativa
CANSAT80G2760 Cannabis sativa
CARHR156810 Cardamine hirsuta
CARHR156820 Cardamine hirsuta
CARHR162180 Cardamine hirsuta
CARHR162200 Cardamine hirsuta
Carub.0005s1419 Capsella rubella
Carub.0005s1881 Capsella rubella
Carub.0005s1882 Capsella rubella
Carub.0006s2234 Capsella rubella
Ca_02974_v3 Cicer arietinum L.
Ca_16217_v3 Cicer arietinum L.
Ca_17622_v3 Cicer arietinum L.
Cc02_g33890 Coffea canephora
Cc02_g33900 Coffea canephora
Cc04_g16220 Coffea canephora
Cfa019054 Carpinus fangiana
Cfa019056 Carpinus fangiana
Cfa019057 Carpinus fangiana
Ciclev10000326m.g Citrus clementina
Ciclev10000576m.g Citrus clementina
Ciclev10000629m.g Citrus clementina
Ciclev10001029m.g Citrus clementina
Ciclev10019035m.g Citrus clementina
CiPaw.03G117700 Carya illinoinensis
CiPaw.04G079100 Carya illinoinensis
CiPaw.11G033100 Carya illinoinensis
CiPaw.11G033200 Carya illinoinensis
CiPaw.11G033300 Carya illinoinensis
CiPaw.11G033400 Carya illinoinensis
CiPaw.11G033500 Carya illinoinensis
CiPaw.12G022500 Carya illinoinensis
ClCG04G001930 Citrullus lanatus
ClCG06G016640 Citrullus lanatus
COL.COLO4_05626 Corchorus olitorius
COL.COLO4_12065 Corchorus olitorius
COL.COLO4_12066 Corchorus olitorius
Cpa.g.sc35.21 Carica papaya
Cpa.g.sc37.13 Carica papaya
CsaV3_1G001870 Cucumis sativus L.
CsaV3_4G030710 Cucumis sativus L.
CSS0009834 Camellia sinensis var. sinensis
CSS0034617 Camellia sinensis var. sinensis
CSS0044008 Camellia sinensis var. sinensis
DCAR_015521 Daucus carota
DCAR_015523 Daucus carota
DCAR_019991 Daucus carota
DCAR_022752 Daucus carota
DCAR_026099 Daucus carota
DCAR_026100 Daucus carota
Dinv12778 Davidia involucrata
Dinv13126 Davidia involucrata
Dinv29655 Davidia involucrata
Dinv36347 Davidia involucrata
Duzib068G0327 Durio zibethinus
Duzib187G1406 Durio zibethinus
Duzib264G1224 Durio zibethinus
ECA234G2409 Erigeron canadensis
ECA246G4314 Erigeron canadensis
ECA248G2090 Erigeron canadensis
EL10Ac4g09634 Beta vulgaris
EL10Ac5g10855 Beta vulgaris
Eucgr.K02885 Eucalyptus grandis
Eucgr.K02886 Eucalyptus grandis
Eucgr.K02887 Eucalyptus grandis
Eucgr.K02888 Eucalyptus grandis
Eucgr.K02890 Eucalyptus grandis
Eucgr.K02891 Eucalyptus grandis
Eucgr.L03388 Eucalyptus grandis
FAN04G0213 Fragaria x ananassa
FAN08G1652 Fragaria x ananassa
FAN13G2285 Fragaria x ananassa
FAN18G3863 Fragaria x ananassa
FAN19G2886 Fragaria x ananassa
FAN23G2201 Fragaria x ananassa
FAN26G1579 Fragaria x ananassa
FAN26G2282 Fragaria x ananassa
FvH4_1g24940 Fragaria vesca
FvH4_5g16230 Fragaria vesca
Glyma.04G177700 Glycine max
Glyma.04G209700 Glycine max
Glyma.05G194101 Glycine max
Glyma.05G194350 Glycine max
Glyma.06G156300 Glycine max
Glyma.06G187200 Glycine max
Glyma.06G187300 Glycine max
Glyma.06G187400 Glycine max
Glyma.08G002100 Glycine max
Gohir.A05G381500 Gossypium hirsutum
Gohir.A12G199900 Gossypium hirsutum
Gohir.D04G033800 Gossypium hirsutum
Gohir.D12G202600 Gossypium hirsutum
Gorai.008G217600 Gossypium raimondii
Gorai.012G038100 Gossypium raimondii
GSVIVG01007836001 Vitis vinifera
GSVIVG01007852001 Vitis vinifera
GSVIVG01007855001 Vitis vinifera
GSVIVG01007856001 Vitis vinifera
GSVIVG01007857001 Vitis vinifera
GSVIVG01007860001 Vitis vinifera
GSVIVG01022328001 Vitis vinifera
HanXRQChr02g0045301 Helianthus annuus
HanXRQChr05g0151511 Helianthus annuus
HanXRQChr05g0151521 Helianthus annuus
HanXRQChr05g0151531 Helianthus annuus
HanXRQChr05g0154431 Helianthus annuus
HanXRQChr10g0309421 Helianthus annuus
Haze_07424 Corylus avellana
Haze_07425 Corylus avellana
Hma1.2p1_0002F.1_g002930 Hydrangea macrophylla
Hund07231 Selenicereus undatus
Hund09400 Selenicereus undatus
Lalb_Chr07g0184261 Lupinus albus
Lalb_Chr08g0236121 Lupinus albus
Lalb_Chr11g0068651 Lupinus albus
Lalb_Chr23g0273061 Lupinus albus
Lj1g0026905 Lotus japonicus
Lj1g0027652 Lotus japonicus
Lj4g0000059 Lotus japonicus
Lj5A120T55 Lonicera japonica
Lj7A582T36 Lonicera japonica
Lsat_1_v5_gn_1_11300 Lactuca sativa
Lsat_1_v5_gn_5_18140 Lactuca sativa
Lsat_1_v5_gn_5_18180 Lactuca sativa
Lsat_1_v5_gn_5_82100 Lactuca sativa
Manes.06G099600 Manihot esculenta
Manes.12G147100 Manihot esculenta
Manes.12G159500 Manihot esculenta
Manes.14G071500 Manihot esculenta
MD06G1182600 Malus domestica
MD06G1182700 Malus domestica
MD06G1182800 Malus domestica
MD14G1188600 Malus domestica
MD14G1188700 Malus domestica
MD15G1136300 Malus domestica
Medtr0095s0020 Medicago truncatula
Medtr0095s0080 Medicago truncatula
Medtr0095s0100 Medicago truncatula
Medtr3g078633 Medicago truncatula
Medtr3g079340 Medicago truncatula
Medtr3g081450 Medicago truncatula
Medtr3g096770 Medicago truncatula
Medtr8g494200 Medicago truncatula
MELO3C008938.2 Cucumis melo
MELO3C017130.2 Cucumis melo
Migut.H00821 Erythranthe guttata
Migut.I00091 Erythranthe guttata
Migut.L00277 Erythranthe guttata
Migut.L00579 Erythranthe guttata
MSTRG.23074 Avicennia marina
MSTRG.23491 Avicennia marina
MSTRG.2770 Avicennia marina
Nitab4.5_0000003g0270 Nicotiana tabacum
Nitab4.5_0000005g0290 Nicotiana tabacum
Nitab4.5_0002101g0050 Nicotiana tabacum
Nitab4.5_0006396g0010 Nicotiana tabacum
Nn1g08978 Nelumbo nucifera
Nn2g14196 Nelumbo nucifera
Nn3g17048 Nelumbo nucifera
Nn3g20698 Nelumbo nucifera
Nn4g22948 Nelumbo nucifera
Nn5g28429 Nelumbo nucifera
Oeu008233.1 Olea europaea
Oeu045354.1 Olea europaea
Os09g0392100 Oryza sativa ssp. japonica
Os11g0195500 Oryza sativa ssp. japonica
Peaxi162Scf00331g01115 Petunia axillaris
Peaxi162Scf00331g01128 Petunia axillaris
Peaxi162Scf00689g00421 Petunia axillaris
PGR044G1186 Punica granatum
PGR044G1480 Punica granatum
PGR102G1228 Punica granatum
PGR102G1322 Punica granatum
PGR102G2206 Punica granatum
PGR119G0365 Punica granatum
PGR119G1832 Punica granatum
PGSC0003DMG400019873 Solanum tuberosum
PGSC0003DMG400033029 Solanum tuberosum
Phvul.002G274500 Phaseolus vulgaris
Phvul.009G154000 Phaseolus vulgaris
Phvul.009G183000 Phaseolus vulgaris
Phvul.009G183100 Phaseolus vulgaris
Potri.005G068700 Populus trichocarpa
Potri.007G100600 Populus trichocarpa
Potri.012G074600 Populus trichocarpa
Potri.012G074700 Populus trichocarpa
Potri.015G069600 Populus trichocarpa
Prupe.4G276500 Prunus persica
Prupe.5G180700 Prunus persica
Prupe.5G180900 Prunus persica
Prupe.5G181000 Prunus persica
Psat0s1748g0200 Pisum sativum
Psat0s2917g0160 Pisum sativum
Psat3g063440 Pisum sativum
Psat7g045480 Pisum sativum
QL10p013718 Quercus lobata
QL10p013728 Quercus lobata
QL10p013755 Quercus lobata
QL10p013761 Quercus lobata
QL10p013773 Quercus lobata
QL10p013814 Quercus lobata
QL10p041154 Quercus lobata
RcHm_v2.0_Chr2g0122591 Rosa chinensis
RcHm_v2.0_Chr2g0170571 Rosa chinensis
RcHm_v2.0_Chr7g0179871 Rosa chinensis
Rhsim08G0167000 Rhododendron simsii
Rhsim08G0167100 Rhododendron simsii
Rhsim10G0127000 Rhododendron simsii
Sabra05G0056000 Salix brachista
Sabra05G0056100 Salix brachista
Sabra07G0083200 Salix brachista
Sabra12G0053200 Salix brachista
Sabra15G0093800 Salix brachista
SalBow5G1742 Salvia bowleyana
SalBow5G5049 Salvia bowleyana
SalBow5G5397 Salvia bowleyana
SalBow7G0977 Salvia bowleyana
SalBow7G1570 Salvia bowleyana
Sc04g0002190 Simmondsia chinensis
Sc09g0002220 Simmondsia chinensis
Sed0010235 Sechium edule
Sed0022724 Sechium edule
Sed0023408 Sechium edule
SEGI_00224 Sequoiadendron giganteum
SEGI_01095 Sequoiadendron giganteum
SEGI_02349 Sequoiadendron giganteum
SEGI_02560 Sequoiadendron giganteum
SEGI_02757 Sequoiadendron giganteum
SEGI_03270 Sequoiadendron giganteum
SEGI_05208 Sequoiadendron giganteum
SEGI_05536 Sequoiadendron giganteum
SEGI_05598 Sequoiadendron giganteum
SEGI_05870 Sequoiadendron giganteum
SEGI_06852 Sequoiadendron giganteum
SEGI_07414 Sequoiadendron giganteum
SEGI_07447 Sequoiadendron giganteum
SEGI_08766 Sequoiadendron giganteum
SEGI_08774 Sequoiadendron giganteum
SEGI_09942 Sequoiadendron giganteum
SEGI_12797 Sequoiadendron giganteum
SEGI_13315 Sequoiadendron giganteum
SEGI_16107 Sequoiadendron giganteum
SEGI_16233 Sequoiadendron giganteum
SEGI_17686 Sequoiadendron giganteum
SEGI_19595 Sequoiadendron giganteum
SEGI_19951 Sequoiadendron giganteum
SEGI_20099 Sequoiadendron giganteum
SEGI_20506 Sequoiadendron giganteum
SEGI_22398 Sequoiadendron giganteum
SEGI_23801 Sequoiadendron giganteum
SEGI_25556 Sequoiadendron giganteum
SEGI_27511 Sequoiadendron giganteum
SEGI_27768 Sequoiadendron giganteum
SEGI_28111 Sequoiadendron giganteum
SEGI_28514 Sequoiadendron giganteum
SEGI_28799 Sequoiadendron giganteum
SEGI_29855 Sequoiadendron giganteum
SEGI_33350 Sequoiadendron giganteum
SEGI_33769 Sequoiadendron giganteum
SEGI_35196 Sequoiadendron giganteum
SEGI_35292 Sequoiadendron giganteum
SEGI_35772 Sequoiadendron giganteum
SEGI_37097 Sequoiadendron giganteum
SEGI_38167 Sequoiadendron giganteum
SEGI_38916 Sequoiadendron giganteum
SEGI_39989 Sequoiadendron giganteum
SEGI_40044 Sequoiadendron giganteum
SEGI_40138 Sequoiadendron giganteum
SEGI_41501 Sequoiadendron giganteum
SGA_v2.0_scaffold107G30767 Striga asiatica
SGA_v2.0_scaffold25G10854 Striga asiatica
SGA_v2.0_scaffold273G46466 Striga asiatica
SGA_v2.0_scaffold54G19616 Striga asiatica
SGA_v2.0_scaffold54G19621 Striga asiatica
SMO118G0542 Selaginella moellendorffii
SMO263G0014 Selaginella moellendorffii
Solyc02g032850.3 Solanum lycopersicum
Solyc06g071280.4 Solanum lycopersicum
Sopen02g011180 Solanum pennellii
Sopen02g011250 Solanum pennellii
Sopen06g027580 Solanum pennellii
Sp5g09870 Schrenkiella parvula
Sp5g13930 Schrenkiella parvula
TAR374G0136 Trochodendron aralioides
TAR622G0265 Trochodendron aralioides
TAR622G0614 Trochodendron aralioides
TAR622G1077 Trochodendron aralioides
TAR625G1159 Trochodendron aralioides
THA.LOC104804461 Tarenaya hassleriana
THA.LOC104821465 Tarenaya hassleriana
Thecc.01G138400 Theobroma cacao
Thecc.01G138600 Theobroma cacao
Thecc.03G002200 Theobroma cacao
Thhalv10010232m.g Eutrema salsugineum
Thhalv10010390m.g Eutrema salsugineum
Thhalv10011112m.g Eutrema salsugineum
TPR.G14289 Trifolium pratense
TPR.G19419 Trifolium pratense
TPR.G36466 Trifolium pratense
TPR.G37403 Trifolium pratense
TPR.G37429 Trifolium pratense
TPR.G40677 Trifolium pratense
TWI39G0860 Tripterygium wilfordii
TWI75G1331 Tripterygium wilfordii
TWI75G1557 Tripterygium wilfordii
vmacro12750 Vaccinium macrocarpon
vmacro12751 Vaccinium macrocarpon
vmacro19349 Vaccinium macrocarpon
vmacro19350 Vaccinium macrocarpon
VMungo0251G2900 Vigna mungo
VMungo1309G0230 Vigna mungo
VMungo1309G1144 Vigna mungo
VMungo1309G2062 Vigna mungo
Zm00001eb090980 Zea mays
Zm00001eb099090 Zea mays
Zm00001eb202040 Zea mays

User provided reference genes

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