Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29640 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.1224 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2957 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1873 Anthoceros agrestis
Actinidia17135 Actinidia chinensis
Actinidia17136 Actinidia chinensis
Actinidia28759 Actinidia chinensis
Actinidia28760 Actinidia chinensis
Actinidia28762 Actinidia chinensis
Actinidia35693 Actinidia chinensis
Actinidia38587 Actinidia chinensis
Ah.02g119240 Amaranthus hybridus
Ah.13g075790 Amaranthus hybridus
Ah.13g075800 Amaranthus hybridus
AL4G22160 Arabidopsis lyrata
AL6G16830 Arabidopsis lyrata
AL6G16850 Arabidopsis lyrata
Aqoxy5G00943 Aquilegia oxysepala
Aqoxy6G03055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8K9MAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D0RQ0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FD1Z9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0AJB0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UD965C Arachis hypogaea
AT5G06740 Arabidopsis thaliana
ATR0122G022 Amborella trichopoda
ATR0122G032 Amborella trichopoda
ATR0605G290 Amborella trichopoda
ATR0824G052 Amborella trichopoda
ATR0824G088 Amborella trichopoda
ATR0824G195 Amborella trichopoda
Atru.chr3.5_Atru.chr3.6 Acer truncatum
Atru.chr5.3591 Acer truncatum
AUR62003328 Chenopodium quinoa
AUR62012021 Chenopodium quinoa
AUR62012022 Chenopodium quinoa
AUR62012023 Chenopodium quinoa
AUR62015357 Chenopodium quinoa
AUR62015358 Chenopodium quinoa
AUR62015359 Chenopodium quinoa
AUR62015360 Chenopodium quinoa
AUR62016254 Chenopodium quinoa
AUR62016255 Chenopodium quinoa
AUR62029521 Chenopodium quinoa
BcaC06g32390 Brassica carinata
BcaC06g32547 Brassica carinata
BolC9t59743H Brassica oleracea
BraA10t45005Z Brassica rapa
C09p70010 Brassica napus
CAN.G128.42 Capsicum annuum
CAN.G128.43 Capsicum annuum
CAN.G128.44 Capsicum annuum
CAN.G128.45 Capsicum annuum
CAN.G801.16 Capsicum annuum
CAN.G883.11 Capsicum annuum
CANSAT25G0500 Cannabis sativa
CANSAT25G3640 Cannabis sativa
CANSAT25G3794 Cannabis sativa
CANSAT25G3840 Cannabis sativa
CANSAT56G1422 Cannabis sativa
CANSAT64G1030 Cannabis sativa
CARHR206440 Cardamine hirsuta
CARHR206450 Cardamine hirsuta
Carub.0006s0562 Capsella rubella
Ca_12067_v3 Cicer arietinum L.
Ca_12070_v3 Cicer arietinum L.
Ca_25025_v3 Cicer arietinum L.
Cc07_g12360 Coffea canephora
CDE02G0174 Ceratophyllum demersum
CDE02G0597 Ceratophyllum demersum
CDE02G1585 Ceratophyllum demersum
CDE02G4448 Ceratophyllum demersum
CDE06G0090 Ceratophyllum demersum
CDE07G1869 Ceratophyllum demersum
CDE11G0017 Ceratophyllum demersum
Cfa003778 Carpinus fangiana
Cfa005404 Carpinus fangiana
Cfa005405 Carpinus fangiana
Cfa005406 Carpinus fangiana
Cfa007122 Carpinus fangiana
Cfa013166 Carpinus fangiana
Cfa014379 Carpinus fangiana
Cfa020159 Carpinus fangiana
Cfa020160 Carpinus fangiana
Cfa020746 Carpinus fangiana
Ciclev10013890m.g Citrus clementina
Ciclev10028039m.g Citrus clementina
CiPaw.05G095700 Carya illinoinensis
CiPaw.06G113300 Carya illinoinensis
CiPaw.09G029800 Carya illinoinensis
CiPaw.10G026100 Carya illinoinensis
ClCG02G003180 Citrullus lanatus
ClCG10G017590 Citrullus lanatus
ClCG10G017640 Citrullus lanatus
COL.COLO4_04809 Corchorus olitorius
COL.COLO4_07026 Corchorus olitorius
COL.COLO4_15700 Corchorus olitorius
COL.COLO4_19436 Corchorus olitorius
COL.COLO4_19437 Corchorus olitorius
COL.COLO4_22581 Corchorus olitorius
COL.COLO4_22583 Corchorus olitorius
COL.COLO4_22585 Corchorus olitorius
COL.COLO4_29322 Corchorus olitorius
Cpa.g.sc85.52 Carica papaya
CsaV3_3G038740 Cucumis sativus L.
CsaV3_3G038760 Cucumis sativus L.
CsaV3_7G002230 Cucumis sativus L.
CSS0019847 Camellia sinensis var. sinensis
CSS0022457 Camellia sinensis var. sinensis
CSS0047828 Camellia sinensis var. sinensis
DCAR_013541 Daucus carota
DCAR_014128 Daucus carota
Dinv14304 Davidia involucrata
Dinv14305 Davidia involucrata
Dinv14306 Davidia involucrata
Dinv14307 Davidia involucrata
Dinv14308 Davidia involucrata
Dinv19110 Davidia involucrata
Dinv28287 Davidia involucrata
Duzib093G0104 Durio zibethinus
Duzib093G0759 Durio zibethinus
Duzib138G1199 Durio zibethinus
Duzib248G0402 Durio zibethinus
ECA246G0370 Erigeron canadensis
ECA246G1378 Erigeron canadensis
ECA246G4290 Erigeron canadensis
EL10Ac3g06901 Beta vulgaris
EL10Ac3g06902 Beta vulgaris
EL10Ac6g14720 Beta vulgaris
EL10Ac8g18822 Beta vulgaris
EL10Ac8g18823 Beta vulgaris
Eucgr.H03724 Eucalyptus grandis
Eucgr.I02181 Eucalyptus grandis
Eucgr.I02186 Eucalyptus grandis
Eucgr.I02192 Eucalyptus grandis
Eucgr.I02194 Eucalyptus grandis
Eucgr.J02576 Eucalyptus grandis
Eucgr.J02577 Eucalyptus grandis
Eucgr.K01843 Eucalyptus grandis
Eucgr.L02204 Eucalyptus grandis
Eucgr.L02371 Eucalyptus grandis
Eucgr.L02496 Eucalyptus grandis
FAN02G0727 Fragaria x ananassa
FAN14G0058 Fragaria x ananassa
FAN14G4450 Fragaria x ananassa
FAN19G0303 Fragaria x ananassa
FAN23G0177 Fragaria x ananassa
FAN23G0895 Fragaria x ananassa
FAN24G2714 Fragaria x ananassa
FAN26G2358 Fragaria x ananassa
FAN28G0417 Fragaria x ananassa
FvH4_1g09820 Fragaria vesca
FvH4_2g17160 Fragaria vesca
FvH4_6g22130 Fragaria vesca
Glyma.01G155600 Glycine max
Glyma.02G172200 Glycine max
Glyma.09G110500 Glycine max
Glyma.09G110700 Glycine max
Glyma.11G089100 Glycine max
Gohir.A01G190932 Gossypium hirsutum
Gohir.A01G191000 Gossypium hirsutum
Gohir.A01G191050 Gossypium hirsutum
Gohir.A01G191100 Gossypium hirsutum
Gohir.A07G076600 Gossypium hirsutum
Gohir.A09G128400 Gossypium hirsutum
Gohir.A12G012200 Gossypium hirsutum
Gohir.D01G178800 Gossypium hirsutum
Gohir.D01G178900 Gossypium hirsutum
Gohir.D01G178933 Gossypium hirsutum
Gohir.D07G081400 Gossypium hirsutum
Gohir.D09G124400 Gossypium hirsutum
Gohir.D11G316650 Gossypium hirsutum
Gohir.D11G317200 Gossypium hirsutum
Gohir.D12G012600 Gossypium hirsutum
Gorai.001G086500 Gossypium raimondii
Gorai.002G224000 Gossypium raimondii
Gorai.002G224100 Gossypium raimondii
Gorai.006G143200 Gossypium raimondii
Gorai.007G347000 Gossypium raimondii
Gorai.008G012800 Gossypium raimondii
Gorai.N017000 Gossypium raimondii
GSVIVG01023846001 Vitis vinifera
GSVIVG01026016001 Vitis vinifera
GSVIVG01026020001 Vitis vinifera
GSVIVG01026021001 Vitis vinifera
GSVIVG01026418001 Vitis vinifera
GSVIVG01033488001 Vitis vinifera
GSVIVG01033490001 Vitis vinifera
HanXRQChr04g0110531 Helianthus annuus
HanXRQChr15g0478911 Helianthus annuus
HanXRQChr15g0478921 Helianthus annuus
HanXRQChr15g0485171 Helianthus annuus
HanXRQChr15g0485211 Helianthus annuus
HanXRQChr16g0532621 Helianthus annuus
Haze_01950 Corylus avellana
Haze_03651 Corylus avellana
Haze_19998 Corylus avellana
Haze_19999 Corylus avellana
Hma1.2p1_0085F.1_g044200 Hydrangea macrophylla
Hma1.2p1_0085F.1_g044230 Hydrangea macrophylla
HPP92_018863 Vanilla planifolia
HPP92_018877 Vanilla planifolia
Hund03556 Selenicereus undatus
Hund19675 Selenicereus undatus
Hund24795 Selenicereus undatus
Lalb_Chr05g0215021 Lupinus albus
Lalb_Chr16g0380271 Lupinus albus
Lalb_Chr16g0380281 Lupinus albus
Lj2A507G41 Lonicera japonica
Lj2g0015695 Lotus japonicus
Lj2P365T30 Lonicera japonica
Lj4A246T77 Lonicera japonica
Lj5g0014645 Lotus japonicus
Lj5g0019748 Lotus japonicus
Lsat_1_v5_gn_3_68600 Lactuca sativa
Manes.02G117800 Manihot esculenta
Manes.03G096300 Manihot esculenta
Manes.08G043300 Manihot esculenta
Manes.09G035900 Manihot esculenta
MBI04_g23328_MAGBIO Magnolia biondii
MBI06_g05820_MAGBIO Magnolia biondii
MD02G1107100 Malus domestica
MD02G1107300 Malus domestica
MD05G1144900 Malus domestica
MD12G1056500 Malus domestica
MD14G1055200 Malus domestica
MD15G1226500 Malus domestica
Medtr0015s0030 Medicago truncatula
Medtr0015s0060 Medicago truncatula
Medtr0015s0090 Medicago truncatula
Medtr5g025020 Medicago truncatula
MELO3C009618.2 Cucumis melo
MELO3C009619.2 Cucumis melo
MELO3C015686.2 Cucumis melo
Migut.D02008 Erythranthe guttata
Migut.L00083 Erythranthe guttata
Nitab4.5_0000304g0040 Nicotiana tabacum
Nitab4.5_0000304g0060 Nicotiana tabacum
Nitab4.5_0002860g0030 Nicotiana tabacum
Nitab4.5_0003600g0040 Nicotiana tabacum
Nitab4.5_0004507g0010 Nicotiana tabacum
Nitab4.5_0007373g0020 Nicotiana tabacum
Nitab4.5_0008108g0020 Nicotiana tabacum
Nitab4.5_0011544g0040 Nicotiana tabacum
Nitab4.5_0012341g0010 Nicotiana tabacum
Nitab4.5_0016838g0010 Nicotiana tabacum
Nn6g31574 Nelumbo nucifera
Nn7g36004 Nelumbo nucifera
Oeu023347.1 Olea europaea
Oeu024778.1 Olea europaea
Os02g0712600 Oryza sativa ssp. japonica
Os02g0712700 Oryza sativa ssp. japonica
Os04g0584100 Oryza sativa ssp. japonica
Os06g0328400 Oryza sativa ssp. japonica
Os08g0514000 Oryza sativa ssp. japonica
Os08g0514100 Oryza sativa ssp. japonica
Peaxi162Scf00480g00023 Petunia axillaris
Peaxi162Scf00918g00415 Petunia axillaris
Peaxi162Scf00920g00026 Petunia axillaris
Peaxi162Scf00981g00110 Petunia axillaris
PGR119G1866 Punica granatum
PGR119G2555 Punica granatum
PGR142G3276 Punica granatum
PGSC0003DMG400018677 Solanum tuberosum
PGSC0003DMG400023671 Solanum tuberosum
PGSC0003DMG401009415 Solanum tuberosum
PGSC0003DMG402009415 Solanum tuberosum
Phvul.002G119900 Phaseolus vulgaris
Phvul.007G260300 Phaseolus vulgaris
Phvul.007G260400 Phaseolus vulgaris
Phvul.007G260500 Phaseolus vulgaris
Potri.001G455500 Populus trichocarpa
Potri.004G209300 Populus trichocarpa
Potri.006G193000 Populus trichocarpa
Potri.011G146500 Populus trichocarpa
Potri.016G045000 Populus trichocarpa
Prupe.7G077800 Prunus persica
Prupe.7G188700 Prunus persica
Prupe.8G183000 Prunus persica
Psat2g147000 Pisum sativum
Psat2g147040 Pisum sativum
Psat3g147200 Pisum sativum
Psat7g088560 Pisum sativum
PSO017G1030 Papaver somniferum
PSO170G5214 Papaver somniferum
PSO675G4159 Papaver somniferum
QL04p009637 Quercus lobata
QL04p009648 Quercus lobata
QL04p009747 Quercus lobata
QL04p009759 Quercus lobata
QL04p009775 Quercus lobata
QL06p053545 Quercus lobata
QL07p023922 Quercus lobata
QL07p023993 Quercus lobata
QL07p024024 Quercus lobata
QL11p056980 Quercus lobata
QL11p056992 Quercus lobata
QL11p056999 Quercus lobata
RcHm_v2.0_Chr2g0096621 Rosa chinensis
RcHm_v2.0_Chr3g0479461 Rosa chinensis
RcHm_v2.0_Chr3g0479491 Rosa chinensis
RcHm_v2.0_Chr6g0281601 Rosa chinensis
RcHm_v2.0_Chr6g0281651 Rosa chinensis
RcHm_v2.0_Chr7g0212121 Rosa chinensis
Rhsim08G0024000 Rhododendron simsii
Rhsim08G0024100 Rhododendron simsii
Rhsim08G0024200 Rhododendron simsii
Rhsim08G0024300 Rhododendron simsii
Rhsim08G0024400 Rhododendron simsii
Rhsim08G0024700 Rhododendron simsii
Rhsim08G0024800 Rhododendron simsii
Rhsim08G0024900 Rhododendron simsii
Rhsim08G0025000 Rhododendron simsii
Rhsim08G0025100 Rhododendron simsii
Rhsim08G0025200 Rhododendron simsii
Rhsim10G0189000 Rhododendron simsii
Rhsim10G0189200 Rhododendron simsii
Rhsim10G0189300 Rhododendron simsii
Rhsim10G0189400 Rhododendron simsii
Rhsim10G0189900 Rhododendron simsii
Rhsim10G0190000 Rhododendron simsii
Rhsim10G0190100 Rhododendron simsii
RhsimUnG0001100 Rhododendron simsii
RhsimUnG0001200 Rhododendron simsii
RhsimUnG0057800 Rhododendron simsii
RhsimUnG0057900 Rhododendron simsii
RhsimUnG0127400 Rhododendron simsii
RhsimUnG0127500 Rhododendron simsii
RhsimUnG0242600 Rhododendron simsii
RhsimUnG0242700 Rhododendron simsii
Sabra06G0148300 Salix brachista
Sabra06G0148500 Salix brachista
Sabra11G0131400 Salix brachista
Sabra16G0049100 Salix brachista
Sabra16G0308100 Salix brachista
SalBow5G1423 Salvia bowleyana
Sc07g0001470 Simmondsia chinensis
Sc13g0002310 Simmondsia chinensis
Sc19g0006050 Simmondsia chinensis
Sed0000284 Sechium edule
Sed0002137 Sechium edule
Sed0003585 Sechium edule
Sed0005902 Sechium edule
Sed0006224 Sechium edule
Sed0006503 Sechium edule
Sed0011712 Sechium edule
Sed0015324 Sechium edule
Sed0018171 Sechium edule
Sed0018490 Sechium edule
Sed0021128 Sechium edule
Sed0024853 Sechium edule
Sed0026036 Sechium edule
Sed0026040 Sechium edule
Sed0026746 Sechium edule
SEGI_15150 Sequoiadendron giganteum
SEGI_17864 Sequoiadendron giganteum
SGA_v2.0_scaffold132G34549 Striga asiatica
Solyc02g068300.3 Solanum lycopersicum
Solyc03g031980.4 Solanum lycopersicum
Solyc10g080510.1 Solanum lycopersicum
Sopen02g017400 Solanum pennellii
Sopen03g005830 Solanum pennellii
Sopen10g031060 Solanum pennellii
Sopen12g018640 Solanum pennellii
Sp6g36110 Schrenkiella parvula
TAR369G0264 Trochodendron aralioides
TAR369G0881 Trochodendron aralioides
TAR369G0974 Trochodendron aralioides
TAR381G0663 Trochodendron aralioides
TAR381G0752 Trochodendron aralioides
TAR623G0241 Trochodendron aralioides
TAR625G0480 Trochodendron aralioides
THA.LOC104799292 Tarenaya hassleriana
THA.LOC104809932 Tarenaya hassleriana
Thecc.02G149100 Theobroma cacao
Thecc.04G122600 Theobroma cacao
Thecc.05G172200 Theobroma cacao
Thecc.05G172400 Theobroma cacao
Thecc.05G172600 Theobroma cacao
Thhalv10012919m.g Eutrema salsugineum
TPR.G14283 Trifolium pratense
TPR.G15249 Trifolium pratense
TPR.G15984 Trifolium pratense
TPR.G31842 Trifolium pratense
TPR.G32327 Trifolium pratense
TPR.G32333 Trifolium pratense
TPR.G32357 Trifolium pratense
TPR.G33751 Trifolium pratense
TWI09G0726 Tripterygium wilfordii
TWI53G0371 Tripterygium wilfordii
TWI74G1672 Tripterygium wilfordii
TWI79G0670 Tripterygium wilfordii
vmacro15357 Vaccinium macrocarpon
vmacro15358 Vaccinium macrocarpon
vmacro18481 Vaccinium macrocarpon
vmacro20411 Vaccinium macrocarpon
vmacro20412 Vaccinium macrocarpon
vmacro20414 Vaccinium macrocarpon
vmacro20415 Vaccinium macrocarpon
vmacro20417 Vaccinium macrocarpon
VMungo0720G0595 Vigna mungo
VMungo1215G0094 Vigna mungo
Zm00001eb072760 Zea mays
Zm00001eb174500 Zea mays
Zm00001eb188800 Zea mays
Zm00001eb199980 Zea mays
Zm00001eb252540 Zea mays

User provided reference genes

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