Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31550 Brassica napus
A01p31560 Brassica napus
A03p43290 Brassica napus
A07p08890 Brassica napus
A07p08980 Brassica napus
A07p08990 Brassica napus
Aa31LG8G9970 Aethionema arabicum
Aa31LG8G9980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.418 Anthoceros agrestis
Actinidia35810 Actinidia chinensis
Ah.13g072320 Amaranthus hybridus
AL242U10030 Arabidopsis lyrata
AL3G38120 Arabidopsis lyrata
AL3G38170 Arabidopsis lyrata
AL3G38190 Arabidopsis lyrata
Aqoxy2G03721 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08UV73 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56Z1DA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5I47GQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.60TT6H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6D2G91 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6WEA5J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BHDE6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6AW8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJ3JB0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I255AM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J2BZ41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTU25K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M2HI9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RNBV6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VA6IN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YX4IN3 Arachis hypogaea
AT3G23460 Arabidopsis thaliana
AT3G23470 Arabidopsis thaliana
AT3G23480 Arabidopsis thaliana
AT3G23510 Arabidopsis thaliana
AT3G23530 Arabidopsis thaliana
ATR0736G203 Amborella trichopoda
Atru.chr4.1938 Acer truncatum
Atru.chr4.1940 Acer truncatum
AUR62002177 Chenopodium quinoa
AUR62015532 Chenopodium quinoa
AUR62016161 Chenopodium quinoa
AUR62035075 Chenopodium quinoa
BcaB03g14622 Brassica carinata
BcaB04g20446 Brassica carinata
BcaB06g26491 Brassica carinata
BcaB06g26493 Brassica carinata
BcaB06g26502 Brassica carinata
BcaC01g03370 Brassica carinata
BcaC01g03804 Brassica carinata
BcaC06g35528 Brassica carinata
BcaC06g35529 Brassica carinata
BcaC06g35537 Brassica carinata
BcaC09g49303 Brassica carinata
BolC1t03986H Brassica oleracea
BolC3t17123H Brassica oleracea
BolC3t17584H Brassica oleracea
BolC6t37463H Brassica oleracea
BolC7t41867H Brassica oleracea
BolC7t41884H Brassica oleracea
BolC7t41887H Brassica oleracea
BraA01t03285Z Brassica rapa
BraA01t03286Z Brassica rapa
BraA03t13468Z Brassica rapa
BraA07t28679Z Brassica rapa
BraA07t28688Z Brassica rapa
BraA07t28692Z Brassica rapa
C01p40250 Brassica napus
C01p40290 Brassica napus
C01p40320 Brassica napus
C03p48450 Brassica napus
C03p53200 Brassica napus
C07p13720 Brassica napus
C07p13820 Brassica napus
C07p13830 Brassica napus
C07p13860 Brassica napus
CAN.G135.73 Capsicum annuum
CAN.G1801.3 Capsicum annuum
CAN.G220.58 Capsicum annuum
CAN.G220.61 Capsicum annuum
CAN.G220.64 Capsicum annuum
CAN.G220.65 Capsicum annuum
CAN.G220.92 Capsicum annuum
CAN.G524.36 Capsicum annuum
CAN.G588.66 Capsicum annuum
CAN.G674.11 Capsicum annuum
CAN.G681.64 Capsicum annuum
CAN.G681.69 Capsicum annuum
CANSAT21G0944 Cannabis sativa
CANSAT21G1419 Cannabis sativa
CANSAT25G3284 Cannabis sativa
CANSAT78G1771 Cannabis sativa
CARHR099420 Cardamine hirsuta
CARHR099430 Cardamine hirsuta
Carub.0003s2371 Capsella rubella
Carub.0003s2373 Capsella rubella
Ca_09809_v3 Cicer arietinum L.
Ca_11937_v3 Cicer arietinum L.
Ca_28724_v3 Cicer arietinum L.
Ca_30490_v3 Cicer arietinum L.
CBR_g31184 Chara braunii
Cc03_g05980 Coffea canephora
CDE08G0370 Ceratophyllum demersum
CDE08G1432 Ceratophyllum demersum
CDE08G1481 Ceratophyllum demersum
Cfa014764 Carpinus fangiana
Cfa014765 Carpinus fangiana
Cfa025193 Carpinus fangiana
Cfa025468 Carpinus fangiana
Ciclev10004346m.g Citrus clementina
Ciclev10005536m.g Citrus clementina
Ciclev10005710m.g Citrus clementina
Ciclev10005727m.g Citrus clementina
Ciclev10007034m.g Citrus clementina
Ciclev10030464m.g Citrus clementina
CiPaw.01G179700 Carya illinoinensis
CiPaw.01G179800 Carya illinoinensis
CiPaw.01G180000 Carya illinoinensis
CiPaw.01G180100 Carya illinoinensis
CiPaw.01G180200 Carya illinoinensis
CiPaw.04G074600 Carya illinoinensis
CiPaw.11G113200 Carya illinoinensis
CiPaw.12G016000 Carya illinoinensis
CiPaw.14G041800 Carya illinoinensis
CiPaw.14G090000 Carya illinoinensis
CiPaw.14G126000 Carya illinoinensis
ClCG06G007160 Citrullus lanatus
ClCG06G007170 Citrullus lanatus
ClCG06G007180 Citrullus lanatus
ClCG07G007110 Citrullus lanatus
ClCG07G007160 Citrullus lanatus
ClCG07G007170 Citrullus lanatus
COL.COLO4_00227 Corchorus olitorius
COL.COLO4_15937 Corchorus olitorius
COL.COLO4_15940 Corchorus olitorius
COL.COLO4_15941 Corchorus olitorius
COL.COLO4_15943 Corchorus olitorius
COL.COLO4_25895 Corchorus olitorius
COL.COLO4_25896 Corchorus olitorius
COL.COLO4_25897 Corchorus olitorius
COL.COLO4_25898 Corchorus olitorius
COL.COLO4_25899 Corchorus olitorius
COL.COLO4_25900 Corchorus olitorius
COL.COLO4_25901 Corchorus olitorius
COL.COLO4_25903 Corchorus olitorius
Cpa.g.sc1584.1 Carica papaya
Cpa.g.sc44.18 Carica papaya
Cre06.g281250 Chlamydomonas reinhardtii
CsaV3_2G012540 Cucumis sativus L.
CsaV3_2G012550 Cucumis sativus L.
CsaV3_2G012560 Cucumis sativus L.
CSS0032050 Camellia sinensis var. sinensis
CSS0047456 Camellia sinensis var. sinensis
DCAR_030759 Daucus carota
Dinv29819 Davidia involucrata
Duzib052G1047 Durio zibethinus
Duzib151G0707 Durio zibethinus
Duzib212G0708 Durio zibethinus
Duzib212G0719 Durio zibethinus
EL10Ac3g04936 Beta vulgaris
EL10Ac3g04960 Beta vulgaris
EL10Ac3g04961 Beta vulgaris
EL10Ac3g04964 Beta vulgaris
Eucgr.H02968 Eucalyptus grandis
Eucgr.H02971 Eucalyptus grandis
Eucgr.H02975 Eucalyptus grandis
Eucgr.H02976 Eucalyptus grandis
FAN01G2895 Fragaria x ananassa
FAN01G2911 Fragaria x ananassa
FAN06G0180 Fragaria x ananassa
FAN06G1280 Fragaria x ananassa
FAN06G2889 Fragaria x ananassa
FAN06G4487 Fragaria x ananassa
FAN12G0280 Fragaria x ananassa
FAN12G3384 Fragaria x ananassa
FAN17G0060 Fragaria x ananassa
FAN17G3117 Fragaria x ananassa
FAN22G1285 Fragaria x ananassa
FAN22G2004 Fragaria x ananassa
FvH4_4g04310 Fragaria vesca
FvH4_4g04360 Fragaria vesca
FvH4_7g18110 Fragaria vesca
FvH4_7g18140 Fragaria vesca
FvH4_7g18480 Fragaria vesca
FvH4_7g18481 Fragaria vesca
Glyma.10G189400 Glycine max
Glyma.20G201400 Glycine max
Gohir.A01G025200 Gossypium hirsutum
Gohir.A01G025600 Gossypium hirsutum
Gohir.A02G041801 Gossypium hirsutum
Gohir.A02G041802 Gossypium hirsutum
Gohir.A02G042000 Gossypium hirsutum
Gohir.A09G228050 Gossypium hirsutum
Gohir.A10G159666 Gossypium hirsutum
Gohir.D01G023400 Gossypium hirsutum
Gohir.D01G023409 Gossypium hirsutum
Gohir.D01G077101 Gossypium hirsutum
Gohir.D02G047550 Gossypium hirsutum
Gohir.D02G047600 Gossypium hirsutum
Gohir.D03G094750 Gossypium hirsutum
Gohir.D09G229100 Gossypium hirsutum
Gohir.D10G084600 Gossypium hirsutum
Gohir.D10G211900 Gossypium hirsutum
Gohir.D13G167111 Gossypium hirsutum
Gorai.002G025800 Gossypium raimondii
Gorai.002G026100 Gossypium raimondii
Gorai.005G052800 Gossypium raimondii
Gorai.005G052900 Gossypium raimondii
Gorai.006G251800 Gossypium raimondii
Gorai.011G092100 Gossypium raimondii
GSVIVG01027886001 Vitis vinifera
GSVIVG01027890001 Vitis vinifera
HanXRQChr02g0059351 Helianthus annuus
HanXRQChr12g0361741 Helianthus annuus
HanXRQChr12g0362501 Helianthus annuus
HanXRQChr12g0362671 Helianthus annuus
HanXRQChr12g0362691 Helianthus annuus
Haze_11439 Corylus avellana
Haze_11441 Corylus avellana
Haze_11442 Corylus avellana
Hma1.2p1_0267F.1_g107070 Hydrangea macrophylla
Hma1.2p1_0267F.1_g107080 Hydrangea macrophylla
Hma1.2p1_0385F.1_g141430 Hydrangea macrophylla
HPP92_009056 Vanilla planifolia
HPP92_028141 Vanilla planifolia
Hund03062 Selenicereus undatus
Hund03063 Selenicereus undatus
Hund03064 Selenicereus undatus
Hund03066 Selenicereus undatus
Hund03067 Selenicereus undatus
Hund03069 Selenicereus undatus
Hund03070 Selenicereus undatus
Hund03072 Selenicereus undatus
Hund03073 Selenicereus undatus
Hund03074 Selenicereus undatus
Hund03075 Selenicereus undatus
Hund03538 Selenicereus undatus
Lalb_Chr06g0169451 Lupinus albus
Lalb_Chr21g0312441 Lupinus albus
Lj5g0020800 Lotus japonicus
Lj6C623G11 Lonicera japonica
Lj6C623T7 Lonicera japonica
Lsat_1_v5_gn_6_54640 Lactuca sativa
Lsat_1_v5_gn_6_54780 Lactuca sativa
Lsat_1_v5_gn_6_56761 Lactuca sativa
Lsat_1_v5_gn_6_56941 Lactuca sativa
Lsat_1_v5_gn_6_68821 Lactuca sativa
Manes.03G160700 Manihot esculenta
Manes.03G160800 Manihot esculenta
Manes.03G160850 Manihot esculenta
Manes.03G160900 Manihot esculenta
Manes.03G161000 Manihot esculenta
Manes.03G161100 Manihot esculenta
Manes.03G161200 Manihot esculenta
Manes.03G161350 Manihot esculenta
Manes.12G059300 Manihot esculenta
Manes.15G043966 Manihot esculenta
Mapoly0062s0039 Marchantia polymorpha
Mapoly1664s0001 Marchantia polymorpha
Mapoly3054s0001 Marchantia polymorpha
Mapoly4131s0001 Marchantia polymorpha
MBI07_g11125_MAGBIO Magnolia biondii
MBI07_g14511_MAGBIO Magnolia biondii
MBI07_g20243_MAGBIO Magnolia biondii
MCO05G694 Micromonas commoda
MD16G1224400 Malus domestica
Medtr1g044520 Medicago truncatula
Medtr1g073700 Medicago truncatula
MELO3C023030.2 Cucumis melo
MELO3C023032.2 Cucumis melo
MELO3C027187.2 Cucumis melo
MELO3C027751.2 Cucumis melo
MELO3C031245.2 Cucumis melo
Migut.G00492 Erythranthe guttata
Migut.N00291 Erythranthe guttata
MSTRG.24666 Avicennia marina
MSTRG.4158 Avicennia marina
Nitab4.5_0000049g0080 Nicotiana tabacum
Nitab4.5_0001051g0160 Nicotiana tabacum
Nitab4.5_0001425g0010 Nicotiana tabacum
Nitab4.5_0001425g0020 Nicotiana tabacum
Nitab4.5_0001425g0070 Nicotiana tabacum
Nitab4.5_0001470g0020 Nicotiana tabacum
Nitab4.5_0001470g0030 Nicotiana tabacum
Nitab4.5_0001470g0050 Nicotiana tabacum
Nitab4.5_0001470g0080 Nicotiana tabacum
Nitab4.5_0002709g0090 Nicotiana tabacum
Nitab4.5_0005604g0010 Nicotiana tabacum
Nitab4.5_0006069g0030 Nicotiana tabacum
Nitab4.5_0019395g0010 Nicotiana tabacum
Nn1g02911 Nelumbo nucifera
Oeu055251.1 Olea europaea
Os07g0474600 Oryza sativa ssp. japonica
Os12g0267200 Oryza sativa ssp. japonica
Peaxi162Scf00013g00340 Petunia axillaris
Peaxi162Scf00033g00275 Petunia axillaris
Peaxi162Scf00033g02610 Petunia axillaris
Peaxi162Scf00169g00317 Petunia axillaris
Peaxi162Scf00169g00318 Petunia axillaris
Peaxi162Scf00266g01010 Petunia axillaris
Peaxi162Scf00300g00518 Petunia axillaris
Peaxi162Scf00817g00120 Petunia axillaris
Peaxi162Scf01082g00028 Petunia axillaris
Peaxi162Scf01248g00420 Petunia axillaris
Peaxi162Scf01248g00421 Petunia axillaris
PGR004G2782 Punica granatum
PGSC0003DMG400007263 Solanum tuberosum
PGSC0003DMG400007265 Solanum tuberosum
PGSC0003DMG400017202 Solanum tuberosum
Phvul.008G158130 Phaseolus vulgaris
Potri.008G170300 Populus trichocarpa
Potri.010G067567 Populus trichocarpa
Potri.010G067600 Populus trichocarpa
Potri.010G067700 Populus trichocarpa
Potri.010G067800 Populus trichocarpa
Potri.010G067900 Populus trichocarpa
Pp3c1_41090 Physcomitrium patens
PRCOL_00005990 Prasinoderma coloniale
Prupe.1G045800 Prunus persica
Psat6g133480 Pisum sativum
PSO017G4741 Papaver somniferum
PSO063G7051 Papaver somniferum
QL06p020190 Quercus lobata
QL06p020465 Quercus lobata
QL06p020509 Quercus lobata
QL06p020553 Quercus lobata
QL06p020653 Quercus lobata
QL06p020667 Quercus lobata
RcHm_v2.0_Chr1g0325031 Rosa chinensis
RcHm_v2.0_Chr1g0362281 Rosa chinensis
RcHm_v2.0_Chr4g0394761 Rosa chinensis
RcHm_v2.0_Chr4g0394801 Rosa chinensis
RcHm_v2.0_Chr4g0394871 Rosa chinensis
RcHm_v2.0_Chr4g0394921 Rosa chinensis
RcHm_v2.0_Chr4g0394931 Rosa chinensis
RcHm_v2.0_Chr4g0394941 Rosa chinensis
RcHm_v2.0_Chr6g0273911 Rosa chinensis
Rhsim04G0173900 Rhododendron simsii
Rhsim04G0174000 Rhododendron simsii
Rhsim04G0174200 Rhododendron simsii
Rhsim04G0174300 Rhododendron simsii
Sabra08G0130000 Salix brachista
Sabra08G0130100 Salix brachista
Sabra08G0130200 Salix brachista
Sabra10G0039500 Salix brachista
Sabra10G0039600 Salix brachista
Sabra10G0039700 Salix brachista
Sabra10G0039900 Salix brachista
SalBow3G4332 Salvia bowleyana
SalBow8G0297 Salvia bowleyana
SalBow8G1010 Salvia bowleyana
SalBow8G1245 Salvia bowleyana
SalBow8G2494 Salvia bowleyana
SalBow8G2922 Salvia bowleyana
SalBow8G3913 Salvia bowleyana
SalBow8G4116 Salvia bowleyana
SalBow8G4602 Salvia bowleyana
Sc13g0005970 Simmondsia chinensis
Sc13g0006090 Simmondsia chinensis
Sc13g0006110 Simmondsia chinensis
Sed0000108 Sechium edule
Sed0007860 Sechium edule
Sed0021154 Sechium edule
SEGI_14689 Sequoiadendron giganteum
SEGI_20730 Sequoiadendron giganteum
SEGI_23794 Sequoiadendron giganteum
SEGI_38188 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12645 Striga asiatica
SGA_v2.0_scaffold67G22708 Striga asiatica
SMO356G0103 Selaginella moellendorffii
Solyc03g045140.4 Solanum lycopersicum
Solyc04g056450.4 Solanum lycopersicum
Solyc09g090500.3 Solanum lycopersicum
Solyc09g090510.3 Solanum lycopersicum
Sopen03g009610 Solanum pennellii
Sopen04g025330 Solanum pennellii
Sopen04g025340 Solanum pennellii
Sopen09g033420 Solanum pennellii
Sopen09g033430 Solanum pennellii
Sopen09g033440 Solanum pennellii
Sp3g21120 Schrenkiella parvula
Sp3g21130 Schrenkiella parvula
Sp3g21140 Schrenkiella parvula
Sp3g21180 Schrenkiella parvula
SpUn0047_0010 Schrenkiella parvula
SpUn0047_0020 Schrenkiella parvula
TAR362G0672 Trochodendron aralioides
THA.LOC104804765 Tarenaya hassleriana
THA.LOC104806424 Tarenaya hassleriana
THA.LOC104808649 Tarenaya hassleriana
THA.LOC104808651 Tarenaya hassleriana
THA.LOC104808652 Tarenaya hassleriana
THA.LOC104808653 Tarenaya hassleriana
Thecc.04G260700 Theobroma cacao
Thecc.04G260900 Theobroma cacao
Thecc.04G261000 Theobroma cacao
Thecc.04G261200 Theobroma cacao
Thecc.04G261300 Theobroma cacao
Thecc.04G261400 Theobroma cacao
Thecc.04G261500 Theobroma cacao
Thecc.04G262900 Theobroma cacao
Thhalv10020039m.g Eutrema salsugineum
Thhalv10020040m.g Eutrema salsugineum
Thhalv10020049m.g Eutrema salsugineum
Thhalv10022172m.g Eutrema salsugineum
TPR.G28756 Trifolium pratense
TPR.G28852 Trifolium pratense
TWI09G0985 Tripterygium wilfordii
TWI09G1386 Tripterygium wilfordii
unitig_749.g13515 Utricularia gibba
vmacro08534 Vaccinium macrocarpon
vmacro08535 Vaccinium macrocarpon
vmacro08536 Vaccinium macrocarpon
VMungo0720G1851 Vigna mungo
Zm00001eb041970 Zea mays
Zm00001eb102480 Zea mays
Zm00001eb164950 Zea mays

User provided reference genes

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