Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36580 Brassica napus
A03p15600 Brassica napus
A04p22610 Brassica napus
A04p32940 Brassica napus
A04p32950 Brassica napus
A04p32960 Brassica napus
A06p29950 Brassica napus
A06p33850 Brassica napus
A06p33870 Brassica napus
A06p46070 Brassica napus
A08p05570 Brassica napus
A09p43480 Brassica napus
Aa31LG1G25380 Aethionema arabicum
Aa31LG2G3370 Aethionema arabicum
Aa31LG2G3380 Aethionema arabicum
Aa31LG2G3390 Aethionema arabicum
Aa31LG6G9920 Aethionema arabicum
Actinidia12616 Actinidia chinensis
Actinidia16903 Actinidia chinensis
Actinidia16904 Actinidia chinensis
Actinidia16905 Actinidia chinensis
Actinidia16906 Actinidia chinensis
Actinidia35491 Actinidia chinensis
Ah.04g163910 Amaranthus hybridus
AL278U10030 Arabidopsis lyrata
AL2G25072 Arabidopsis lyrata
AL2G25074 Arabidopsis lyrata
AL2G25100 Arabidopsis lyrata
AL2G38920 Arabidopsis lyrata
AL4G24520 Arabidopsis lyrata
AL4G42490 Arabidopsis lyrata
AL5G17750 Arabidopsis lyrata
AL6G43020 Arabidopsis lyrata
AL835U10010 Arabidopsis lyrata
AL835U10020 Arabidopsis lyrata
AL835U10030 Arabidopsis lyrata
AL8G28390 Arabidopsis lyrata
AL8G28400 Arabidopsis lyrata
AL8G40310 Arabidopsis lyrata
AL8G40330 Arabidopsis lyrata
Aqoxy1G01817 Aquilegia oxysepala
Aqoxy1G01852 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.71RM0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81G4PJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FFGR5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GR30HE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YE4ZXC Arachis hypogaea
AT1G66852 Arabidopsis thaliana
AT1G66855 Arabidopsis thaliana
AT1G66870 Arabidopsis thaliana
AT1G78520 Arabidopsis thaliana
AT2G29735 Arabidopsis thaliana
AT2G43660 Arabidopsis thaliana
AT2G43670 Arabidopsis thaliana
AT3G28250 Arabidopsis thaliana
AT4G09090 Arabidopsis thaliana
AT4G09462 Arabidopsis thaliana
AT4G09464 Arabidopsis thaliana
AT4G09465 Arabidopsis thaliana
AT4G09466 Arabidopsis thaliana
AT4G09467 Arabidopsis thaliana
AT4G16165 Arabidopsis thaliana
AT5G53600 Arabidopsis thaliana
AT5G53610 Arabidopsis thaliana
AT5G63225 Arabidopsis thaliana
AT5G63230 Arabidopsis thaliana
AT5G63240 Arabidopsis thaliana
Atru.chr10.1345 Acer truncatum
Atru.chr4.3131 Acer truncatum
Atru.chr4.3132 Acer truncatum
AUR62027591 Chenopodium quinoa
AUR62030250 Chenopodium quinoa
AUR62034590 Chenopodium quinoa
AUR62038634 Chenopodium quinoa
AUR62042359 Chenopodium quinoa
BcaB01g04206 Brassica carinata
BcaB01g04223 Brassica carinata
BcaB04g17514 Brassica carinata
BcaB05g25142 Brassica carinata
BcaB06g28327 Brassica carinata
BcaB06g29337 Brassica carinata
BcaB07g30081 Brassica carinata
BcaB08g34744 Brassica carinata
BcaC01g02571 Brassica carinata
BcaC01g02909 Brassica carinata
BcaC02g08069 Brassica carinata
BcaC03g15816 Brassica carinata
BcaC03g17576 Brassica carinata
BcaC06g31489 Brassica carinata
BcaC07g39506 Brassica carinata
BolC2t11611H Brassica oleracea
BolC3t14224H Brassica oleracea
BolC3t18110H Brassica oleracea
BolC3t18588H Brassica oleracea
BolC4t27396H Brassica oleracea
BolC4t28564H Brassica oleracea
BolC4t28566H Brassica oleracea
BolC4t28567H Brassica oleracea
BolC4t28569H Brassica oleracea
BolC6t40262H Brassica oleracea
BolC7t43493H Brassica oleracea
BolC7t43494H Brassica oleracea
BolC8t47391H Brassica oleracea
BolC8t50172H Brassica oleracea
BraA02t08653Z Brassica rapa
BraA03t10853Z Brassica rapa
BraA04t17806Z Brassica rapa
BraA04t18753Z Brassica rapa
BraA04t18754Z Brassica rapa
BraA04t18755Z Brassica rapa
BraA06t25946Z Brassica rapa
BraA06t26316Z Brassica rapa
BraA06t26318Z Brassica rapa
BraA06t26319Z Brassica rapa
BraA06t26320Z Brassica rapa
BraA06t26321Z Brassica rapa
BraA06t26322Z Brassica rapa
BraA06t27472Z Brassica rapa
BraA07t31887Z Brassica rapa
BraA09t39813Z Brassica rapa
C02p35610 Brassica napus
C02p55540 Brassica napus
C03p18260 Brassica napus
C03p58490 Brassica napus
C03p63350 Brassica napus
C04p58780 Brassica napus
C04p70620 Brassica napus
C04p70640 Brassica napus
C04p70650 Brassica napus
C04p70670 Brassica napus
C06p52430 Brassica napus
C07p29450 Brassica napus
CAN.G1013.28 Capsicum annuum
CAN.G375.64 Capsicum annuum
CAN.G375.65 Capsicum annuum
CAN.G904.28 Capsicum annuum
CANSAT35G0989 Cannabis sativa
CANSAT56G1212 Cannabis sativa
CARHR058980 Cardamine hirsuta
CARHR072010 Cardamine hirsuta
CARHR123060 Cardamine hirsuta
CARHR123080 Cardamine hirsuta
CARHR138840 Cardamine hirsuta
CARHR138850 Cardamine hirsuta
CARHR138860 Cardamine hirsuta
CARHR185210 Cardamine hirsuta
CARHR185220 Cardamine hirsuta
CARHR233800 Cardamine hirsuta
CARHR266750 Cardamine hirsuta
CARHR277080 Cardamine hirsuta
CARHR277090 Cardamine hirsuta
Carub.0002s1290 Capsella rubella
Carub.0002s1291 Capsella rubella
Carub.0002s1306 Capsella rubella
Carub.0002s1307 Capsella rubella
Carub.0002s1308 Capsella rubella
Carub.0002s2537 Capsella rubella
Carub.0004s1083 Capsella rubella
Carub.0004s1084 Capsella rubella
Carub.0004s2619 Capsella rubella
Carub.0004s2620 Capsella rubella
Carub.0004s2621 Capsella rubella
Carub.0006s2795 Capsella rubella
Carub.0006s2796 Capsella rubella
Carub.0006s2797 Capsella rubella
Carub.0006s2798 Capsella rubella
Carub.0008s1380 Capsella rubella
Carub.0008s2398 Capsella rubella
Ca_03416_v3 Cicer arietinum L.
Ca_29739_v3 Cicer arietinum L.
Cc05_g10520 Coffea canephora
CDE02G3256 Ceratophyllum demersum
CDE07G0330 Ceratophyllum demersum
CDE09G0472 Ceratophyllum demersum
Ciclev10010161m.g Citrus clementina
Ciclev10010407m.g Citrus clementina
Ciclev10017518m.g Citrus clementina
Ciclev10017622m.g Citrus clementina
Ciclev10017969m.g Citrus clementina
Ciclev10017980m.g Citrus clementina
Ciclev10017995m.g Citrus clementina
Ciclev10022784m.g Citrus clementina
Ciclev10022921m.g Citrus clementina
CiPaw.07G123800 Carya illinoinensis
CiPaw.08G084400 Carya illinoinensis
CiPaw.09G126800 Carya illinoinensis
ClCG11G017040 Citrullus lanatus
COL.COLO4_06068 Corchorus olitorius
COL.COLO4_06069 Corchorus olitorius
COL.COLO4_17447 Corchorus olitorius
Cpa.g.sc1272.1 Carica papaya
CsaV3_4G032700 Cucumis sativus L.
CSS0000808 Camellia sinensis var. sinensis
CSS0016991 Camellia sinensis var. sinensis
CSS0018710 Camellia sinensis var. sinensis
DCAR_011122 Daucus carota
DCAR_011125 Daucus carota
DCAR_019631 Daucus carota
DCAR_029830 Daucus carota
Dinv05248 Davidia involucrata
Dinv13347 Davidia involucrata
Dinv32279 Davidia involucrata
Dinv32280 Davidia involucrata
Duzib160G0186 Durio zibethinus
Duzib160G0877 Durio zibethinus
Duzib213G0344 Durio zibethinus
Duzib235G1071 Durio zibethinus
Duzib242G0003 Durio zibethinus
ECA236G2745 Erigeron canadensis
ECA240G3146 Erigeron canadensis
EL10Ac4g08455 Beta vulgaris
EL10Ac4g08477 Beta vulgaris
EL10Ac8g19757 Beta vulgaris
Eucgr.A01020 Eucalyptus grandis
Eucgr.F01381 Eucalyptus grandis
FAN07G1211 Fragaria x ananassa
FAN10G1398 Fragaria x ananassa
FAN11G0039 Fragaria x ananassa
FAN11G0866 Fragaria x ananassa
FAN11G3074 Fragaria x ananassa
FAN12G2188 Fragaria x ananassa
FAN16G2105 Fragaria x ananassa
FAN16G3180 Fragaria x ananassa
FAN19G0971 Fragaria x ananassa
FAN21G2226 Fragaria x ananassa
FAN21G3587 Fragaria x ananassa
FAN25G0792 Fragaria x ananassa
FAN25G0841 Fragaria x ananassa
FAN25G2445 Fragaria x ananassa
FAN26G0604 Fragaria x ananassa
FvH4_1g26451 Fragaria vesca
FvH4_3g06030 Fragaria vesca
FvH4_3g06040 Fragaria vesca
FvH4_3g17340 Fragaria vesca
FvH4_4g08590 Fragaria vesca
FvH4_4g21350 Fragaria vesca
Glyma.05G128300 Glycine max
Glyma.13G262400 Glycine max
Glyma.15G243000 Glycine max
Gohir.A01G045400 Gossypium hirsutum
Gohir.A01G145590 Gossypium hirsutum
Gohir.A04G046100 Gossypium hirsutum
Gohir.A06G197600 Gossypium hirsutum
Gohir.A10G038500 Gossypium hirsutum
Gohir.A10G218950 Gossypium hirsutum
Gohir.A10G219100 Gossypium hirsutum
Gohir.A12G121000 Gossypium hirsutum
Gohir.D05G336500 Gossypium hirsutum
Gohir.D06G205025 Gossypium hirsutum
Gohir.D10G039450 Gossypium hirsutum
Gohir.D10G228600 Gossypium hirsutum
Gohir.D12G124800 Gossypium hirsutum
Gorai.002G044300 Gossypium raimondii
Gorai.008G135800 Gossypium raimondii
Gorai.009G360300 Gossypium raimondii
Gorai.010G239200 Gossypium raimondii
Gorai.011G041500 Gossypium raimondii
Gorai.011G260900 Gossypium raimondii
Gorai.011G261100 Gossypium raimondii
GSVIVG01014068001 Vitis vinifera
GSVIVG01021412001 Vitis vinifera
HanXRQChr02g0055121 Helianthus annuus
HanXRQChr03g0072791 Helianthus annuus
HanXRQChr12g0382211 Helianthus annuus
HanXRQChr13g0389761 Helianthus annuus
HanXRQChr15g0495301 Helianthus annuus
Haze_05123 Corylus avellana
Haze_08465 Corylus avellana
Haze_23845 Corylus avellana
Hma1.2p1_0713F.1_g207780 Hydrangea macrophylla
HPP92_002955 Vanilla planifolia
HPP92_014230 Vanilla planifolia
HPP92_026490 Vanilla planifolia
Hund10380 Selenicereus undatus
Lalb_Chr01g0006951 Lupinus albus
Lalb_Chr03g0037361 Lupinus albus
Lalb_Chr07g0188741 Lupinus albus
Lalb_Chr07g0188811 Lupinus albus
Lalb_Chr12g0208881 Lupinus albus
Lalb_Chr19g0128091 Lupinus albus
Lalb_Chr19g0133671 Lupinus albus
Lalb_Chr20g0109061 Lupinus albus
Lalb_Chr25g0285551 Lupinus albus
Lj1A153T34 Lonicera japonica
Lj1A937T96 Lonicera japonica
Lj3g0020764 Lotus japonicus
Lj4g0000222 Lotus japonicus
Lj4g0022021 Lotus japonicus
Lsat_1_v5_gn_1_45141 Lactuca sativa
Lsat_1_v5_gn_1_96060 Lactuca sativa
Lsat_1_v5_gn_2_31680 Lactuca sativa
Lsat_1_v5_gn_7_100500 Lactuca sativa
Lsat_1_v5_gn_9_101640 Lactuca sativa
Manes.01G233300 Manihot esculenta
Manes.15G100300 Manihot esculenta
Manes.15G118802 Manihot esculenta
Manes.17G067200 Manihot esculenta
MBI07_g07813_MAGBIO Magnolia biondii
MBI10_g36390_MAGBIO Magnolia biondii
MBI18_g09627_MAGBIO Magnolia biondii
MBI18_g09629_MAGBIO Magnolia biondii
MD01G1223700 Malus domestica
MD10G1265100 Malus domestica
MD11G1273700 Malus domestica
MD17G1283500 Malus domestica
Medtr2g072500 Medicago truncatula
MELO3C016683.2 Cucumis melo
Migut.B00866 Erythranthe guttata
Migut.B00867 Erythranthe guttata
Migut.B00868 Erythranthe guttata
Migut.C00449 Erythranthe guttata
Migut.C00450 Erythranthe guttata
Migut.C00451 Erythranthe guttata
Migut.C00476 Erythranthe guttata
Migut.C00477 Erythranthe guttata
Migut.G00008 Erythranthe guttata
Migut.G00649 Erythranthe guttata
Migut.G00650 Erythranthe guttata
Migut.G00651 Erythranthe guttata
Migut.G00654 Erythranthe guttata
Migut.G00655 Erythranthe guttata
Migut.G00659 Erythranthe guttata
Migut.G00661 Erythranthe guttata
Migut.H02034 Erythranthe guttata
Migut.I00188 Erythranthe guttata
Migut.N00994 Erythranthe guttata
Migut.O00396 Erythranthe guttata
MSTRG.11379 Avicennia marina
MSTRG.14993 Avicennia marina
MSTRG.26219 Avicennia marina
Nitab4.5_0000592g0460 Nicotiana tabacum
Nitab4.5_0001040g0200 Nicotiana tabacum
Nitab4.5_0001140g0110 Nicotiana tabacum
Nitab4.5_0001655g0270 Nicotiana tabacum
Nitab4.5_0009310g0010 Nicotiana tabacum
Nn3g20647 Nelumbo nucifera
Nn3g21888 Nelumbo nucifera
Nn4g26502 Nelumbo nucifera
Nn8g40098 Nelumbo nucifera
Oeu000090.1 Olea europaea
Oeu005374.1 Olea europaea
Oeu019948.1 Olea europaea
Os01g0243700 Oryza sativa ssp. japonica
Os08g0135500 Oryza sativa ssp. japonica
Peaxi162Scf00002g00205 Petunia axillaris
Peaxi162Scf00002g02216 Petunia axillaris
Peaxi162Scf00071g00315 Petunia axillaris
Peaxi162Scf00111g01223 Petunia axillaris
Peaxi162Scf00573g00058 Petunia axillaris
PGR031G2993 Punica granatum
PGR083G1626 Punica granatum
Phvul.002G196100 Phaseolus vulgaris
Phvul.005G064400 Phaseolus vulgaris
Potri.001G351600 Populus trichocarpa
Potri.001G380600 Populus trichocarpa
Potri.011G099000 Populus trichocarpa
Potri.011G099600 Populus trichocarpa
Potri.011G101351 Populus trichocarpa
Potri.011G101451 Populus trichocarpa
Potri.014G114500 Populus trichocarpa
Potri.015G010150 Populus trichocarpa
Prupe.4G076700 Prunus persica
Prupe.4G076900 Prunus persica
Prupe.4G084600 Prunus persica
Prupe.4G130100 Prunus persica
Prupe.4G153400 Prunus persica
Prupe.6G294200 Prunus persica
Psat1g006640 Pisum sativum
Psat6g050640 Pisum sativum
PSO210G3710 Papaver somniferum
PSO339G2696 Papaver somniferum
PSO384G3537 Papaver somniferum
PSO761G0182 Papaver somniferum
QL08p027860 Quercus lobata
QL10p047334 Quercus lobata
RcHm_v2.0_Chr4g0427121 Rosa chinensis
RcHm_v2.0_Chr5g0013281 Rosa chinensis
RcHm_v2.0_Chr5g0013291 Rosa chinensis
RcHm_v2.0_Chr5g0013321 Rosa chinensis
RcHm_v2.0_Chr5g0013341 Rosa chinensis
RcHm_v2.0_Chr5g0013351 Rosa chinensis
RcHm_v2.0_Chr5g0013361 Rosa chinensis
RcHm_v2.0_Chr5g0013371 Rosa chinensis
RcHm_v2.0_Chr5g0013381 Rosa chinensis
RcHm_v2.0_Chr5g0013391 Rosa chinensis
RcHm_v2.0_Chr5g0028861 Rosa chinensis
Rhsim04G0247400 Rhododendron simsii
Rhsim11G0100600 Rhododendron simsii
Sabra14G0084600 Salix brachista
Sabra16G0250900 Salix brachista
SalBow1G0051 Salvia bowleyana
SalBow1G1381 Salvia bowleyana
SalBow1G2306 Salvia bowleyana
SalBow2G0250 Salvia bowleyana
SalBow7G0184 Salvia bowleyana
SalBow7G0606 Salvia bowleyana
Sc07g0002330 Simmondsia chinensis
Sc10g0005180 Simmondsia chinensis
Sc10g0005190 Simmondsia chinensis
Sc16g0007820 Simmondsia chinensis
Sc17g0005070 Simmondsia chinensis
Sed0010429 Sechium edule
SGA_v2.0_scaffold279G46781 Striga asiatica
SGA_v2.0_scaffold56G20000 Striga asiatica
SMO124G0005 Selaginella moellendorffii
SMO143G0174 Selaginella moellendorffii
SMO232G0086 Selaginella moellendorffii
SMO361G0138 Selaginella moellendorffii
SMO361G0402 Selaginella moellendorffii
SMO364G0263 Selaginella moellendorffii
Solyc07g062010.1 Solanum lycopersicum
Solyc07g062020.2 Solanum lycopersicum
Solyc10g007510.2 Solanum lycopersicum
Sopen07g030270 Solanum pennellii
Sopen07g030280 Solanum pennellii
Sopen10g003450 Solanum pennellii
Sp2g26350 Schrenkiella parvula
Sp4g12440 Schrenkiella parvula
Sp5g33610 Schrenkiella parvula
TAR365G0719 Trochodendron aralioides
TAR365G1096 Trochodendron aralioides
TAR383G0483 Trochodendron aralioides
TAR627G0430 Trochodendron aralioides
TAR629G1827 Trochodendron aralioides
THA.LOC104802128 Tarenaya hassleriana
THA.LOC104813986 Tarenaya hassleriana
Thecc.01G322900 Theobroma cacao
Thecc.06G154200 Theobroma cacao
Thecc.06G154400 Theobroma cacao
Thecc.06G154500 Theobroma cacao
Thecc.07G140400 Theobroma cacao
Thhalv10001721m.g Eutrema salsugineum
Thhalv10005328m.g Eutrema salsugineum
Thhalv10005350m.g Eutrema salsugineum
Thhalv10011991m.g Eutrema salsugineum
Thhalv10012146m.g Eutrema salsugineum
Thhalv10017796m.g Eutrema salsugineum
Thhalv10019333m.g Eutrema salsugineum
Thhalv10019456m.g Eutrema salsugineum
TPR.G4836 Trifolium pratense
TPR.G6838 Trifolium pratense
TWI09G1109 Tripterygium wilfordii
TWI39G0863 Tripterygium wilfordii
vmacro11990 Vaccinium macrocarpon
VMungo0251G3510 Vigna mungo
Zm00001eb079780 Zea mays
Zm00001eb086020 Zea mays
Zm00001eb118810 Zea mays
Zm00001eb173140 Zea mays

User provided reference genes

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