Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27700 Brassica napus
A04p13590 Brassica napus
A06p41070 Brassica napus
A07p17230 Brassica napus
A09p09820 Brassica napus
Aa31LG1G15250 Aethionema arabicum
Aa31LG2G5100 Aethionema arabicum
Aa31LG4G18870 Aethionema arabicum
Aa31LG5G11540 Aethionema arabicum
Aa31LG5G11600 Aethionema arabicum
Aa31LG9G1080 Aethionema arabicum
Aa31sc170G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3637 Anthoceros agrestis
Actinidia12109 Actinidia chinensis
Actinidia14000 Actinidia chinensis
Actinidia32562 Actinidia chinensis
Actinidia36543 Actinidia chinensis
Ah.08g209580 Amaranthus hybridus
Ah.11g051180 Amaranthus hybridus
AL5G16990 Arabidopsis lyrata
AL5G30874 Arabidopsis lyrata
AL5G30880 Arabidopsis lyrata
AL6G10180 Arabidopsis lyrata
AL7G49280 Arabidopsis lyrata
AL8G24200 Arabidopsis lyrata
AL8G44760 Arabidopsis lyrata
Aqoxy3G01227 Aquilegia oxysepala
Aqoxy4G02386 Aquilegia oxysepala
Aqoxy5G03752 Aquilegia oxysepala
Aqoxy6G01033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2KM20E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9X741C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CNG2R8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E9FVSW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q2D8ST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFYS5E Arachis hypogaea
AT3G27560 Arabidopsis thaliana
AT3G50720 Arabidopsis thaliana
AT3G50730 Arabidopsis thaliana
AT5G01850 Arabidopsis thaliana
AT5G40540 Arabidopsis thaliana
AT5G50180 Arabidopsis thaliana
AT5G66710 Arabidopsis thaliana
ATR0824G273 Amborella trichopoda
Atru.chr3.532 Acer truncatum
Atru.chr6.2419 Acer truncatum
Atru.chr8.2389 Acer truncatum
Atru.chr9.2577 Acer truncatum
AUR62006377 Chenopodium quinoa
AUR62006378 Chenopodium quinoa
AUR62008145 Chenopodium quinoa
AUR62028727 Chenopodium quinoa
AUR62029712 Chenopodium quinoa
BcaB01g00590 Brassica carinata
BcaB01g02913 Brassica carinata
BcaB02g09998 Brassica carinata
BcaB04g20108 Brassica carinata
BcaB05g21906 Brassica carinata
BcaB06g27528 Brassica carinata
BcaC01g04826 Brassica carinata
BcaC03g13105 Brassica carinata
BcaC04g23153 Brassica carinata
BcaC06g30977 Brassica carinata
BcaC06g33803 Brassica carinata
BcaC06g34735 Brassica carinata
BNapus_Darmor_BZH_scaffold_209p00080 Brassica napus
BolC2t05985H Brassica oleracea
BolC2t05988H Brassica oleracea
BolC3t15663H Brassica oleracea
BolC4t26340H Brassica oleracea
BolC7t43040H Brassica oleracea
BolC9t54055H Brassica oleracea
BraA02t04675Z Brassica rapa
BraA03t11982Z Brassica rapa
BraA04t17020Z Brassica rapa
BraA06t27030Z Brassica rapa
BraA07t29450Z Brassica rapa
BraA09t36629Z Brassica rapa
C03p33410 Brassica napus
C04p47370 Brassica napus
C07p25090 Brassica napus
C07p36670 Brassica napus
C09p11620 Brassica napus
CAN.G110.4 Capsicum annuum
CAN.G358.126 Capsicum annuum
CAN.G473.17 Capsicum annuum
CANSAT35G0399 Cannabis sativa
CANSAT64G2148 Cannabis sativa
CANSAT80G2565 Cannabis sativa
CARHR148940 Cardamine hirsuta
CARHR160230 Cardamine hirsuta
CARHR212200 Cardamine hirsuta
CARHR258440 Cardamine hirsuta
CARHR261440 Cardamine hirsuta
CARHR281010 Cardamine hirsuta
Carub.0005s0599 Capsella rubella
Carub.0005s1705 Capsella rubella
Carub.0005s1706 Capsella rubella
Carub.0007s3498 Capsella rubella
Carub.0008s1020 Capsella rubella
Carub.0008s2779 Capsella rubella
Ca_00393_v3 Cicer arietinum L.
Ca_07757_v3 Cicer arietinum L.
Ca_16131_v3 Cicer arietinum L.
Ca_26384_v3 Cicer arietinum L.
CBR_g16000 Chara braunii
Cc06_g00450 Coffea canephora
Cc07_g01560 Coffea canephora
Cc07_g09160 Coffea canephora
CDE04G0454 Ceratophyllum demersum
CDE04G3311 Ceratophyllum demersum
CDE04G3350 Ceratophyllum demersum
CDE07G0248 Ceratophyllum demersum
CDE12G0572 Ceratophyllum demersum
Cfa004278 Carpinus fangiana
Cfa007342 Carpinus fangiana
Cfa017047 Carpinus fangiana
Cfa019215 Carpinus fangiana
Ciclev10011970m.g Citrus clementina
Ciclev10015773m.g Citrus clementina
Ciclev10020876m.g Citrus clementina
Ciclev10025821m.g Citrus clementina
CiPaw.03G045100 Carya illinoinensis
CiPaw.04G029300 Carya illinoinensis
CiPaw.09G220200 Carya illinoinensis
CiPaw.11G019700 Carya illinoinensis
CiPaw.12G031200 Carya illinoinensis
ClCG01G019350 Citrullus lanatus
ClCG06G017420 Citrullus lanatus
ClCG09G019310 Citrullus lanatus
ClCG10G013790 Citrullus lanatus
ClCG10G022660 Citrullus lanatus
COL.COLO4_16537 Corchorus olitorius
COL.COLO4_22120 Corchorus olitorius
COL.COLO4_29166 Corchorus olitorius
COL.COLO4_36760 Corchorus olitorius
Cpa.g.c26638.4 Carica papaya
Cpa.g.c44939 Carica papaya
Cpa.g.sc158.8 Carica papaya
Cpa.g.sc159.21 Carica papaya
CsaV3_1G001070 Cucumis sativus L.
CsaV3_3G033170 Cucumis sativus L.
CsaV3_3G042870 Cucumis sativus L.
CsaV3_5G027080 Cucumis sativus L.
CsaV3_6G046060 Cucumis sativus L.
CSS0007737 Camellia sinensis var. sinensis
CSS0010387 Camellia sinensis var. sinensis
CSS0017508 Camellia sinensis var. sinensis
CSS0017871 Camellia sinensis var. sinensis
CSS0034896 Camellia sinensis var. sinensis
CSS0036714 Camellia sinensis var. sinensis
CSS0049332 Camellia sinensis var. sinensis
DCAR_017229 Daucus carota
DCAR_017233 Daucus carota
DCAR_021728 Daucus carota
DCAR_023977 Daucus carota
Dinv11370 Davidia involucrata
Dinv25333 Davidia involucrata
Dinv25730 Davidia involucrata
Dinv26807 Davidia involucrata
Dinv33431 Davidia involucrata
Duzib068G0211 Durio zibethinus
Duzib147G0370 Durio zibethinus
Duzib147G1026 Durio zibethinus
Duzib151G1093 Durio zibethinus
Duzib187G0548 Durio zibethinus
Duzib212G0430 Durio zibethinus
Duzib264G0049 Durio zibethinus
Duzib264G0470 Durio zibethinus
ECA232G2273 Erigeron canadensis
ECA238G3023 Erigeron canadensis
ECA246G2138 Erigeron canadensis
ECA247G2932 Erigeron canadensis
EL10Ac5g10656 Beta vulgaris
EL10Ac7g17077 Beta vulgaris
Eucgr.B00222 Eucalyptus grandis
Eucgr.J02253 Eucalyptus grandis
Eucgr.K01281 Eucalyptus grandis
FAN02G1647 Fragaria x ananassa
FAN04G0388 Fragaria x ananassa
FAN05G1813 Fragaria x ananassa
FAN05G1923 Fragaria x ananassa
FAN05G2782 Fragaria x ananassa
FAN08G2793 Fragaria x ananassa
FAN09G2241 Fragaria x ananassa
FAN09G4499 Fragaria x ananassa
FAN13G3038 Fragaria x ananassa
FAN14G0154 Fragaria x ananassa
FAN14G2583 Fragaria x ananassa
FAN18G0666 Fragaria x ananassa
FAN19G3069 Fragaria x ananassa
FAN23G0791 Fragaria x ananassa
FAN26G1799 Fragaria x ananassa
FAN28G0137 Fragaria x ananassa
FvH4_1g13890 Fragaria vesca
FvH4_5g06280 Fragaria vesca
FvH4_6g10040 Fragaria vesca
FvH4_6g51650 Fragaria vesca
Glyma.01G132300 Glycine max
Glyma.03G036000 Glycine max
Glyma.04G188200 Glycine max
Glyma.05G002600 Glycine max
Glyma.06G177700 Glycine max
Glyma.09G275900 Glycine max
Glyma.16G069200 Glycine max
Glyma.16G141600 Glycine max
Glyma.19G002802 Glycine max
Glyma.19G056300 Glycine max
Gohir.A02G003900 Gossypium hirsutum
Gohir.A03G057000 Gossypium hirsutum
Gohir.A05G355100 Gossypium hirsutum
Gohir.A07G223900 Gossypium hirsutum
Gohir.A09G029800 Gossypium hirsutum
Gohir.A09G213648 Gossypium hirsutum
Gohir.A11G186200 Gossypium hirsutum
Gohir.D02G004300 Gossypium hirsutum
Gohir.D03G109500 Gossypium hirsutum
Gohir.D04G058100 Gossypium hirsutum
Gohir.D07G231000 Gossypium hirsutum
Gohir.D09G029500 Gossypium hirsutum
Gohir.D09G214400 Gossypium hirsutum
Gohir.D11G192800 Gossypium hirsutum
Gorai.001G266100 Gossypium raimondii
Gorai.003G115600 Gossypium raimondii
Gorai.005G004900 Gossypium raimondii
Gorai.006G034500 Gossypium raimondii
Gorai.006G234800 Gossypium raimondii
Gorai.007G205800 Gossypium raimondii
Gorai.012G064800 Gossypium raimondii
GSVIVG01007646001 Vitis vinifera
GSVIVG01019010001 Vitis vinifera
GSVIVG01030194001 Vitis vinifera
GSVIVG01032389001 Vitis vinifera
HanXRQChr09g0255291 Helianthus annuus
HanXRQChr10g0296061 Helianthus annuus
HanXRQChr14g0451191 Helianthus annuus
HanXRQChr15g0463201 Helianthus annuus
HanXRQChr16g0519001 Helianthus annuus
Haze_07585 Corylus avellana
Haze_14754 Corylus avellana
Haze_15123 Corylus avellana
Haze_21164 Corylus avellana
Hma1.2p1_0046F.1_g027130 Hydrangea macrophylla
Hma1.2p1_0818F.1_g223240 Hydrangea macrophylla
Hma1.2p1_1052F.1_g252280 Hydrangea macrophylla
Hma1.2p1_1747F.1_g300500 Hydrangea macrophylla
HPP92_006180 Vanilla planifolia
HPP92_013833 Vanilla planifolia
HPP92_020247 Vanilla planifolia
Hund02787 Selenicereus undatus
Hund03718 Selenicereus undatus
Hund14141 Selenicereus undatus
Hund19780 Selenicereus undatus
Lalb_Chr01g0023701 Lupinus albus
Lalb_Chr03g0043721 Lupinus albus
Lalb_Chr06g0176631 Lupinus albus
Lalb_Chr09g0322601 Lupinus albus
Lalb_Chr09g0322611 Lupinus albus
Lalb_Chr11g0070271 Lupinus albus
Lj1g0004534 Lotus japonicus
Lj1g0014325 Lotus japonicus
Lj1g0018926 Lotus japonicus
Lj2C60G8 Lonicera japonica
Lj2g0002431 Lotus japonicus
Lj2g0027026 Lotus japonicus
Lj5A130T69 Lonicera japonica
Lj7C600T4 Lonicera japonica
Lsat_1_v5_gn_0_11681 Lactuca sativa
Lsat_1_v5_gn_2_91361 Lactuca sativa
Lsat_1_v5_gn_4_184300 Lactuca sativa
Lsat_1_v5_gn_4_77260 Lactuca sativa
Lsat_1_v5_gn_9_37801 Lactuca sativa
Manes.08G172200 Manihot esculenta
Manes.09G117100 Manihot esculenta
Manes.12G089826 Manihot esculenta
Manes.14G060600 Manihot esculenta
Manes.15G151400 Manihot esculenta
Mapoly0187s0006 Marchantia polymorpha
MBI03_g42979_MAGBIO Magnolia biondii
MBI08_g18355_MAGBIO Magnolia biondii
MBI16_g26983_MAGBIO Magnolia biondii
MD04G1173100 Malus domestica
MD06G1165800 Malus domestica
MD09G1024000 Malus domestica
MD09G1025800 Malus domestica
MD09G1045400 Malus domestica
MD12G1186500 Malus domestica
MD14G1171600 Malus domestica
MD15G1266800 Malus domestica
MD17G1023300 Malus domestica
Medtr3g076970 Medicago truncatula
Medtr5g019700 Medicago truncatula
Medtr6g004440 Medicago truncatula
Medtr7g072710 Medicago truncatula
MELO3C007810.2 Cucumis melo
MELO3C009110.2 Cucumis melo
MELO3C021586.2 Cucumis melo
MELO3C026256.2 Cucumis melo
MELO3C026587.2 Cucumis melo
Migut.H00189 Erythranthe guttata
Migut.J00052 Erythranthe guttata
Migut.K01408 Erythranthe guttata
MSTRG.24043 Avicennia marina
MSTRG.3141 Avicennia marina
MSTRG.3287 Avicennia marina
MSTRG.5509 Avicennia marina
Nitab4.5_0000046g0150 Nicotiana tabacum
Nitab4.5_0001279g0160 Nicotiana tabacum
Nitab4.5_0001466g0060 Nicotiana tabacum
Nitab4.5_0001860g0110 Nicotiana tabacum
Nitab4.5_0002128g0010 Nicotiana tabacum
Nitab4.5_0004721g0040 Nicotiana tabacum
Nitab4.5_0008922g0030 Nicotiana tabacum
Nitab4.5_0009627g0010 Nicotiana tabacum
Nitab4.5_0010966g0010 Nicotiana tabacum
Nn2g10327 Nelumbo nucifera
Nn3g16698 Nelumbo nucifera
Nn4g22601 Nelumbo nucifera
Nn5g26865 Nelumbo nucifera
Oeu018145.1 Olea europaea
Oeu018146.1 Olea europaea
Oeu039049.1 Olea europaea
Oeu054626.1 Olea europaea
Oeu060434.1 Olea europaea
Oeu062391.1 Olea europaea
Oeu063852.1 Olea europaea
Os02g0594100 Oryza sativa ssp. japonica
Os03g0816100 Oryza sativa ssp. japonica
Peaxi162Scf00129g01648 Petunia axillaris
Peaxi162Scf00427g00511 Petunia axillaris
Peaxi162Scf00700g00426 Petunia axillaris
Peaxi162Scf00732g00340 Petunia axillaris
Peaxi162Scf00751g00415 Petunia axillaris
PGR004G2904 Punica granatum
PGR044G2373 Punica granatum
PGR083G0007 Punica granatum
PGR083G0319 Punica granatum
PGSC0003DMG400012606 Solanum tuberosum
PGSC0003DMG400012659 Solanum tuberosum
Phvul.001G096600 Phaseolus vulgaris
Phvul.003G251900 Phaseolus vulgaris
Phvul.004G004800 Phaseolus vulgaris
Phvul.008G083700 Phaseolus vulgaris
Phvul.009G174100 Phaseolus vulgaris
Phvul.010G068300 Phaseolus vulgaris
Potri.001G343900 Populus trichocarpa
Potri.016G134900 Populus trichocarpa
Potri.017G065500 Populus trichocarpa
Pp3c15_16340 Physcomitrium patens
Pp3c9_16610 Physcomitrium patens
Prupe.3G293100 Prunus persica
Prupe.5G165700 Prunus persica
Prupe.6G292000 Prunus persica
Prupe.7G150600 Prunus persica
Psat1g052960 Pisum sativum
Psat2g161240 Pisum sativum
Psat3g120400 Pisum sativum
Psat5g116400 Pisum sativum
PSO017G0620 Papaver somniferum
PSO017G6680 Papaver somniferum
PSO111G0055 Papaver somniferum
PSO170G2674 Papaver somniferum
PSO478G1518 Papaver somniferum
PSO541G3828 Papaver somniferum
PSO541G4851 Papaver somniferum
PSO675G8777 Papaver somniferum
PSO754G0084 Papaver somniferum
QL02p074129 Quercus lobata
QL07p032425 Quercus lobata
QL10p006891 Quercus lobata
RcHm_v2.0_Chr2g0102201 Rosa chinensis
RcHm_v2.0_Chr2g0173171 Rosa chinensis
RcHm_v2.0_Chr3g0460721 Rosa chinensis
RcHm_v2.0_Chr7g0192581 Rosa chinensis
Rhsim08G0177600 Rhododendron simsii
Rhsim10G0015000 Rhododendron simsii
Sabra04G0152300 Salix brachista
Sabra16G0223200 Salix brachista
SalBow1G3584 Salvia bowleyana
SalBow7G1119 Salvia bowleyana
Sc02g0000230 Simmondsia chinensis
Sc03g0000910 Simmondsia chinensis
Sc03g0000920 Simmondsia chinensis
Sc03g0007100 Simmondsia chinensis
Sc03g0007310 Simmondsia chinensis
Sc16g0001130 Simmondsia chinensis
Sc16g0001140 Simmondsia chinensis
Sed0018298 Sechium edule
Sed0018409 Sechium edule
Sed0024791 Sechium edule
Sed0027372 Sechium edule
SEGI_03663 Sequoiadendron giganteum
SEGI_17624 Sequoiadendron giganteum
SEGI_26914 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34912 Striga asiatica
SGA_v2.0_scaffold33G13400 Striga asiatica
SGA_v2.0_scaffold85G26633 Striga asiatica
SMO348G0044 Selaginella moellendorffii
Solyc02g085620.3 Solanum lycopersicum
Solyc02g093410.4 Solanum lycopersicum
Solyc09g018060.4 Solanum lycopersicum
Sopen02g030290 Solanum pennellii
Sopen02g038000 Solanum pennellii
Sopen09g010510 Solanum pennellii
Sp2g16730 Schrenkiella parvula
Sp2g29990 Schrenkiella parvula
Sp5g11520 Schrenkiella parvula
Sp6g12270 Schrenkiella parvula
Sp6g41090 Schrenkiella parvula
Sp7g01330 Schrenkiella parvula
TAR369G0883 Trochodendron aralioides
TAR371G0206 Trochodendron aralioides
TAR374G0049 Trochodendron aralioides
TAR374G0656 Trochodendron aralioides
TAR376G0006 Trochodendron aralioides
TAR381G1128 Trochodendron aralioides
TAR622G0357 Trochodendron aralioides
TAR623G0012 Trochodendron aralioides
TAR623G0737 Trochodendron aralioides
TAR633G0625 Trochodendron aralioides
THA.LOC104805365 Tarenaya hassleriana
THA.LOC104809776 Tarenaya hassleriana
THA.LOC104819217 Tarenaya hassleriana
THA.LOC104827070 Tarenaya hassleriana
Thecc.01G040000 Theobroma cacao
Thecc.03G025800 Theobroma cacao
Thecc.04G018800 Theobroma cacao
Thecc.04G153100 Theobroma cacao
Thhalv10004342m.g Eutrema salsugineum
Thhalv10004482m.g Eutrema salsugineum
Thhalv10011053m.g Eutrema salsugineum
Thhalv10013975m.g Eutrema salsugineum
Thhalv10027816m.g Eutrema salsugineum
TPR.G18827 Trifolium pratense
TPR.G21813 Trifolium pratense
TPR.G26949 Trifolium pratense
TPR.G31947 Trifolium pratense
TPR.G35380 Trifolium pratense
TPR.G39945 Trifolium pratense
TWI53G1203 Tripterygium wilfordii
TWI56G1160 Tripterygium wilfordii
TWI77G0826 Tripterygium wilfordii
vmacro05872 Vaccinium macrocarpon
vmacro19299 Vaccinium macrocarpon
vmacro20364 Vaccinium macrocarpon
VMungo0251G3400 Vigna mungo
VMungo0331G1261 Vigna mungo
VMungo0331G1924 Vigna mungo
VMungo0464G1281 Vigna mungo
VMungo1309G1286 Vigna mungo
VMungo1383G0292 Vigna mungo
VMungo1383G2139 Vigna mungo
Zm00001eb062230 Zea mays
Zm00001eb183610 Zea mays

User provided reference genes

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