Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30340 Brassica napus
A03p67040 Brassica napus
A06p09610 Brassica napus
A08p32270 Brassica napus
A08p32280 Brassica napus
A09p62940 Brassica napus
A09p62950 Brassica napus
A09p62960 Brassica napus
Aa31LG1G1370 Aethionema arabicum
Aa31LG2G13670 Aethionema arabicum
Aa31LG2G3650 Aethionema arabicum
Actinidia17749 Actinidia chinensis
Actinidia36297 Actinidia chinensis
Ah.03g138140 Amaranthus hybridus
Ah.03g138150 Amaranthus hybridus
Ah.16g102150 Amaranthus hybridus
AL1G25240 Arabidopsis lyrata
AL1G25250 Arabidopsis lyrata
AL1G25260 Arabidopsis lyrata
AL1G25270 Arabidopsis lyrata
AL1G25280 Arabidopsis lyrata
AL2G14640 Arabidopsis lyrata
Aqoxy3G03820 Aquilegia oxysepala
Aqoxy3G03821 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DH8ES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.10IC2A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86FTER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B6YHW5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CTM7LX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7I0EY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HGW8YH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.METS51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0SR8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RB2X72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1Y5K0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6K4Y7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5NWFC Arachis hypogaea
AT1G13470 Arabidopsis thaliana
AT1G13480 Arabidopsis thaliana
AT1G13490 Arabidopsis thaliana
AT1G13500 Arabidopsis thaliana
AT1G13510 Arabidopsis thaliana
AT1G13520 Arabidopsis thaliana
AT1G13530 Arabidopsis thaliana
AT1G13540 Arabidopsis thaliana
AT1G13550 Arabidopsis thaliana
AT1G61600 Arabidopsis thaliana
ATR0691G122 Amborella trichopoda
ATR1149G001 Amborella trichopoda
ATR1149G011 Amborella trichopoda
ATR1149G051 Amborella trichopoda
ATR1149G084 Amborella trichopoda
ATR1149G126 Amborella trichopoda
ATR1149G153 Amborella trichopoda
Atru.chr11.1441 Acer truncatum
Atru.chr11.1471 Acer truncatum
Atru.chr5.3124 Acer truncatum
Atru.chr5.3125 Acer truncatum
Atru.chr5.3126 Acer truncatum
Atru.chr8.792 Acer truncatum
AUR62002967 Chenopodium quinoa
AUR62002968 Chenopodium quinoa
AUR62002969 Chenopodium quinoa
AUR62002970 Chenopodium quinoa
AUR62002971 Chenopodium quinoa
AUR62002973 Chenopodium quinoa
AUR62002975 Chenopodium quinoa
AUR62007775 Chenopodium quinoa
AUR62007776 Chenopodium quinoa
AUR62007778 Chenopodium quinoa
AUR62007780 Chenopodium quinoa
AUR62007781 Chenopodium quinoa
AUR62008940 Chenopodium quinoa
BcaB02g06449 Brassica carinata
BcaB03g13137 Brassica carinata
BcaB03g13139 Brassica carinata
BcaB03g13198 Brassica carinata
BcaB08g34306 Brassica carinata
BcaB08g34307 Brassica carinata
BcaB08g34308 Brassica carinata
BcaB08g34309 Brassica carinata
BcaB08g34310 Brassica carinata
BcaB08g34311 Brassica carinata
BcaC02g10557 Brassica carinata
BcaC05g25247 Brassica carinata
BcaC06g31851 Brassica carinata
BcaC07g38694 Brassica carinata
BcaC07g41636 Brassica carinata
BcaC07g41637 Brassica carinata
BcaC07g41638 Brassica carinata
BcaC07g41639 Brassica carinata
BolC1t03812H Brassica oleracea
BolC4t24280H Brassica oleracea
BolC5t29881H Brassica oleracea
BolC8t49241H Brassica oleracea
BolC8t49243H Brassica oleracea
BolC8t52187H Brassica oleracea
BolC8t52188H Brassica oleracea
BolC8t52189H Brassica oleracea
BolC8t52190H Brassica oleracea
BolC8t52191H Brassica oleracea
BraA01t02775Z Brassica rapa
BraA01t03168Z Brassica rapa
BraA06t24151Z Brassica rapa
BraA08t35150Z Brassica rapa
BraA09t41652Z Brassica rapa
BraA09t41653Z Brassica rapa
BraA09t41654Z Brassica rapa
C01p38530 Brassica napus
C04p27410 Brassica napus
C05p11320 Brassica napus
C08p16210 Brassica napus
C08p16230 Brassica napus
C08p16240 Brassica napus
C08p46380 Brassica napus
C08p46390 Brassica napus
C08p46400 Brassica napus
C08p46410 Brassica napus
CAN.G184.37 Capsicum annuum
CAN.G497.20 Capsicum annuum
CANSAT64G0345 Cannabis sativa
CANSAT64G0448 Cannabis sativa
CANSAT64G1122 Cannabis sativa
CANSAT64G1392 Cannabis sativa
CANSAT64G1476 Cannabis sativa
CANSAT64G1500 Cannabis sativa
CANSAT64G2507 Cannabis sativa
CARHR013820 Cardamine hirsuta
CARHR013830 Cardamine hirsuta
CARHR013840 Cardamine hirsuta
CARHR013850 Cardamine hirsuta
CARHR013860 Cardamine hirsuta
CARHR013870 Cardamine hirsuta
CARHR050780 Cardamine hirsuta
Carub.0001s1318 Capsella rubella
Carub.0001s1319 Capsella rubella
Carub.0001s1320 Capsella rubella
Carub.0001s1321 Capsella rubella
Carub.0001s1322 Capsella rubella
Carub.0001s1323 Capsella rubella
Carub.0002s0359 Capsella rubella
Ca_05121_v3 Cicer arietinum L.
Ca_18087_v3 Cicer arietinum L.
Ca_18088_v3 Cicer arietinum L.
Ca_18089_v3 Cicer arietinum L.
Cc03_g12560 Coffea canephora
Cc11_g11050 Coffea canephora
Cc11_g11060 Coffea canephora
Cc11_g11070 Coffea canephora
CDE05G0899 Ceratophyllum demersum
CDE05G2080 Ceratophyllum demersum
Cfa007984 Carpinus fangiana
Cfa008800 Carpinus fangiana
Cfa008801 Carpinus fangiana
Ciclev10011860m.g Citrus clementina
Ciclev10031737m.g Citrus clementina
CiPaw.04G004600 Carya illinoinensis
CiPaw.04G004800 Carya illinoinensis
CiPaw.05G117700 Carya illinoinensis
CiPaw.05G117800 Carya illinoinensis
CiPaw.05G117900 Carya illinoinensis
CiPaw.05G118000 Carya illinoinensis
CiPaw.05G118100 Carya illinoinensis
CiPaw.05G118200 Carya illinoinensis
ClCG05G023280 Citrullus lanatus
ClCG05G023560 Citrullus lanatus
ClCG11G001110 Citrullus lanatus
COL.COLO4_27717 Corchorus olitorius
COL.COLO4_27719 Corchorus olitorius
COL.COLO4_27720 Corchorus olitorius
Cpa.g.sc652.2 Carica papaya
CsaV3_5G013160 Cucumis sativus L.
CsaV3_5G033730 Cucumis sativus L.
CsaV3_5G033740 Cucumis sativus L.
CsaV3_5G033750 Cucumis sativus L.
CSS0002740 Camellia sinensis var. sinensis
CSS0005821 Camellia sinensis var. sinensis
CSS0008984 Camellia sinensis var. sinensis
CSS0028850 Camellia sinensis var. sinensis
CSS0031530 Camellia sinensis var. sinensis
CSS0034981 Camellia sinensis var. sinensis
CSS0036279 Camellia sinensis var. sinensis
CSS0039977 Camellia sinensis var. sinensis
DCAR_023710 Daucus carota
DCAR_023711 Daucus carota
DCAR_023712 Daucus carota
DCAR_023713 Daucus carota
DCAR_023714 Daucus carota
DCAR_023715 Daucus carota
DCAR_023716 Daucus carota
DCAR_023717 Daucus carota
DCAR_023718 Daucus carota
DCAR_023719 Daucus carota
DCAR_023720 Daucus carota
Dinv16553 Davidia involucrata
Dinv27413 Davidia involucrata
Dinv34870 Davidia involucrata
Duzib213G0179 Durio zibethinus
Duzib251G0638 Durio zibethinus
ECA246G1175 Erigeron canadensis
EL10Ac2g04656 Beta vulgaris
EL10Ac6g14563 Beta vulgaris
EL10Ac6g14567 Beta vulgaris
EL10Ac6g14572 Beta vulgaris
EL10Ac6g14573 Beta vulgaris
EL10Ac6g14574 Beta vulgaris
EL10Ac6g14579 Beta vulgaris
EL10Ac6g14581 Beta vulgaris
Eucgr.B03079 Eucalyptus grandis
Eucgr.B03080 Eucalyptus grandis
Eucgr.B03082 Eucalyptus grandis
Eucgr.B03083 Eucalyptus grandis
FAN02G2097 Fragaria x ananassa
FAN05G3794 Fragaria x ananassa
FAN09G3142 Fragaria x ananassa
FAN12G2209 Fragaria x ananassa
FAN14G3409 Fragaria x ananassa
FAN19G3079 Fragaria x ananassa
FAN22G0560 Fragaria x ananassa
FAN22G2212 Fragaria x ananassa
FvH4_4g28540 Fragaria vesca
FvH4_4g28541 Fragaria vesca
FvH4_4g28542 Fragaria vesca
FvH4_4g28543 Fragaria vesca
FvH4_4g28550 Fragaria vesca
FvH4_4g28551 Fragaria vesca
FvH4_4g28552 Fragaria vesca
FvH4_4g28553 Fragaria vesca
FvH4_6g45700 Fragaria vesca
Glyma.02G128800 Glycine max
Glyma.02G129700 Glycine max
Glyma.04G152902 Glycine max
Glyma.19G042500 Glycine max
Gohir.A13G095045 Gossypium hirsutum
Gohir.A13G150100 Gossypium hirsutum
Gohir.D11G307400 Gossypium hirsutum
Gohir.D13G089100 Gossypium hirsutum
Gohir.D13G154400 Gossypium hirsutum
Gorai.007G337800 Gossypium raimondii
Gorai.013G101900 Gossypium raimondii
Gorai.013G174400 Gossypium raimondii
GSVIVG01012025001 Vitis vinifera
GSVIVG01012026001 Vitis vinifera
HanXRQChr15g0475891 Helianthus annuus
HanXRQChr15g0475921 Helianthus annuus
HanXRQChr15g0475931 Helianthus annuus
Haze_11814 Corylus avellana
Haze_11817 Corylus avellana
Haze_11863 Corylus avellana
Haze_11865 Corylus avellana
Hma1.2p1_1233F.1_g269000 Hydrangea macrophylla
Hma1.2p1_1391F.1_g280090 Hydrangea macrophylla
Hma1.2p1_1391F.1_g280100 Hydrangea macrophylla
Hma1.2p1_1424F.1_g282680 Hydrangea macrophylla
Hma1.2p1_1424F.1_g282690 Hydrangea macrophylla
Hma1.2p1_1424F.1_g282700 Hydrangea macrophylla
Hma1.2p1_1424F.1_g282710 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284820 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284830 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284835 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284850 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284860 Hydrangea macrophylla
Hma1.2p1_1459F.1_g284880 Hydrangea macrophylla
Hund05544 Selenicereus undatus
Hund05545 Selenicereus undatus
Hund13745 Selenicereus undatus
Hund25121 Selenicereus undatus
Lalb_Chr04g0255121 Lupinus albus
Lalb_Chr04g0255131 Lupinus albus
Lalb_Chr06g0174751 Lupinus albus
Lalb_Chr10g0099521 Lupinus albus
Lalb_Chr17g0341751 Lupinus albus
Lj2g0010695 Lotus japonicus
Lj2g0013134 Lotus japonicus
Lj2g0022464 Lotus japonicus
Lj2g0027664 Lotus japonicus
Lj3A1023G52 Lonicera japonica
Lsat_1_v5_gn_3_58781 Lactuca sativa
Lsat_1_v5_gn_3_58801 Lactuca sativa
Lsat_1_v5_gn_3_62720 Lactuca sativa
Manes.02G064600 Manihot esculenta
Manes.06G076500 Manihot esculenta
Manes.14G094500 Manihot esculenta
MBI15_g34976_MAGBIO Magnolia biondii
MBI15_g37970_MAGBIO Magnolia biondii
MBI15_g37971_MAGBIO Magnolia biondii
MBI15_g41002_MAGBIO Magnolia biondii
MBI15_g41003_MAGBIO Magnolia biondii
MBI15_g45231_MAGBIO Magnolia biondii
MBI15_g47021_MAGBIO Magnolia biondii
MD09G1080800 Malus domestica
MD13G1051500 Malus domestica
MD13G1051600 Malus domestica
MD13G1051700 Malus domestica
MD13G1051800 Malus domestica
MD13G1051900 Malus domestica
MD13G1052000 Malus domestica
MD13G1052100 Malus domestica
MD16G1057800 Malus domestica
MD16G1057900 Malus domestica
Medtr5g035665 Medicago truncatula
Medtr5g035670 Medicago truncatula
Medtr5g035690 Medicago truncatula
Medtr5g035750 Medicago truncatula
Medtr5g035760 Medicago truncatula
Medtr6g016660 Medicago truncatula
Medtr6g472110 Medicago truncatula
MELO3C012189.2 Cucumis melo
MELO3C012190.2 Cucumis melo
MELO3C012191.2 Cucumis melo
MELO3C020038.2 Cucumis melo
Migut.E00273 Erythranthe guttata
Migut.E00274 Erythranthe guttata
Migut.H00554 Erythranthe guttata
MSTRG.13484 Avicennia marina
MSTRG.13486 Avicennia marina
MSTRG.23838 Avicennia marina
Nitab4.5_0000259g0300 Nicotiana tabacum
Nitab4.5_0000391g0200 Nicotiana tabacum
Nitab4.5_0001982g0080 Nicotiana tabacum
Nitab4.5_0006224g0040 Nicotiana tabacum
Nitab4.5_0006347g0020 Nicotiana tabacum
Nitab4.5_0012553g0010 Nicotiana tabacum
Nn3g17623 Nelumbo nucifera
Nn3g17625 Nelumbo nucifera
Nn3g17626 Nelumbo nucifera
Nn7g37181 Nelumbo nucifera
Oeu007106.1 Olea europaea
Oeu054560.1 Olea europaea
Os08g0412700 Oryza sativa ssp. japonica
Os08g0412800 Oryza sativa ssp. japonica
Os08g0413100 Oryza sativa ssp. japonica
Os08g0413200 Oryza sativa ssp. japonica
Os08g0413500 Oryza sativa ssp. japonica
Os08g0414000 Oryza sativa ssp. japonica
Peaxi162Scf00188g00434 Petunia axillaris
Peaxi162Scf00198g00514 Petunia axillaris
Peaxi162Scf00198g00515 Petunia axillaris
Peaxi162Scf01056g00113 Petunia axillaris
PGR102G3340 Punica granatum
PGSC0003DMG400007520 Solanum tuberosum
PGSC0003DMG400007521 Solanum tuberosum
PGSC0003DMG400010099 Solanum tuberosum
PGSC0003DMG400023046 Solanum tuberosum
Phvul.003G034200 Phaseolus vulgaris
Phvul.003G034300 Phaseolus vulgaris
Phvul.003G034400 Phaseolus vulgaris
Phvul.004G048200 Phaseolus vulgaris
Potri.004G106100 Populus trichocarpa
Potri.008G109400 Populus trichocarpa
Potri.008G109500 Populus trichocarpa
Potri.010G133500 Populus trichocarpa
Potri.018G008300 Populus trichocarpa
Potri.T077590 Populus trichocarpa
Potri.T093108 Populus trichocarpa
Prupe.1G300000 Prunus persica
Prupe.1G300100 Prunus persica
Prupe.1G300200 Prunus persica
Prupe.1G300300 Prunus persica
Prupe.1G300400 Prunus persica
Prupe.3G243200 Prunus persica
Psat2g096320 Pisum sativum
Psat2g112080 Pisum sativum
PSO170G2110 Papaver somniferum
PSO407G0439 Papaver somniferum
PSO478G0471 Papaver somniferum
QL02p053745 Quercus lobata
QL03p041243 Quercus lobata
QL03p044392 Quercus lobata
QL08p021055 Quercus lobata
QL08p021062 Quercus lobata
QL08p021072 Quercus lobata
QL10p057238 Quercus lobata
QL10p058142 Quercus lobata
QL11p007776 Quercus lobata
QL11p007800 Quercus lobata
RcHm_v2.0_Chr2g0163851 Rosa chinensis
RcHm_v2.0_Chr4g0436551 Rosa chinensis
RcHm_v2.0_Chr4g0436581 Rosa chinensis
RcHm_v2.0_Chr4g0436641 Rosa chinensis
RcHm_v2.0_Chr4g0436651 Rosa chinensis
RcHm_v2.0_Chr4g0436661 Rosa chinensis
Rhsim10G0065900 Rhododendron simsii
Rhsim12G0079600 Rhododendron simsii
Rhsim12G0080000 Rhododendron simsii
Rhsim12G0080200 Rhododendron simsii
RhsimUnG0161900 Rhododendron simsii
RhsimUnG0162000 Rhododendron simsii
RhsimUnG0162100 Rhododendron simsii
RhsimUnG0162200 Rhododendron simsii
Sabra04G0076300 Salix brachista
Sabra08G0083100 Salix brachista
Sabra08G0083200 Salix brachista
Sabra08G0083300 Salix brachista
Sabra10G0102100 Salix brachista
Sabra18G0015400 Salix brachista
Sc04g0007020 Simmondsia chinensis
Sc04g0007030 Simmondsia chinensis
Sc04g0007040 Simmondsia chinensis
Sc11g0002900 Simmondsia chinensis
Sc11g0002920 Simmondsia chinensis
Sc14g0004550 Simmondsia chinensis
Sed0008383 Sechium edule
Sed0010318 Sechium edule
Sed0014673 Sechium edule
Sed0015118 Sechium edule
Sed0017481 Sechium edule
Sed0021730 Sechium edule
Sed0026309 Sechium edule
SEGI_01926 Sequoiadendron giganteum
SEGI_03999 Sequoiadendron giganteum
SEGI_04785 Sequoiadendron giganteum
SEGI_09397 Sequoiadendron giganteum
SEGI_17023 Sequoiadendron giganteum
SEGI_20201 Sequoiadendron giganteum
SEGI_31491 Sequoiadendron giganteum
SEGI_32741 Sequoiadendron giganteum
SEGI_36994 Sequoiadendron giganteum
SEGI_39521 Sequoiadendron giganteum
SGA_v2.0_scaffold14G06784 Striga asiatica
SGA_v2.0_scaffold52G19024 Striga asiatica
SGA_v2.0_scaffold59G20640 Striga asiatica
SHI28917 Sapria himalayana
SHI28918 Sapria himalayana
Solyc02g089650.3 Solanum lycopersicum
Solyc05g010460.4 Solanum lycopersicum
Sopen02g034380 Solanum pennellii
Sopen05g006250 Solanum pennellii
Sopen05g006260 Solanum pennellii
Sopen05g006270 Solanum pennellii
Sp1g11940 Schrenkiella parvula
Sp2g02980 Schrenkiella parvula
TAR371G1017 Trochodendron aralioides
TAR381G0160 Trochodendron aralioides
TAR622G0799 Trochodendron aralioides
TAR629G2082 Trochodendron aralioides
TAR629G2202 Trochodendron aralioides
TAR629G3451 Trochodendron aralioides
THA.LOC104805547 Tarenaya hassleriana
THA.LOC104824043 Tarenaya hassleriana
Thecc.02G315300 Theobroma cacao
Thecc.02G315400 Theobroma cacao
Thecc.07G120000 Theobroma cacao
Thecc.07G186200 Theobroma cacao
Thhalv10007827m.g Eutrema salsugineum
Thhalv10007895m.g Eutrema salsugineum
Thhalv10009781m.g Eutrema salsugineum
Thhalv10023469m.g Eutrema salsugineum
TPR.G13487 Trifolium pratense
TPR.G13492 Trifolium pratense
TPR.G13495 Trifolium pratense
TPR.G13512 Trifolium pratense
TPR.G39401 Trifolium pratense
TPR.G827 Trifolium pratense
TPR.G9687 Trifolium pratense
TWI34G1633 Tripterygium wilfordii
TWI75G0753 Tripterygium wilfordii
TWI75G1419 Tripterygium wilfordii
TWI75G1624 Tripterygium wilfordii
vmacro01350 Vaccinium macrocarpon
vmacro01355 Vaccinium macrocarpon
vmacro01356 Vaccinium macrocarpon
vmacro05589 Vaccinium macrocarpon
VMungo0464G1089 Vigna mungo
VMungo0464G1430 Vigna mungo
VMungo1215G0766 Vigna mungo
VMungo1215G1353 Vigna mungo
VMungo1215G2612 Vigna mungo
Zm00001eb178940 Zea mays

User provided reference genes

Program Settings