Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00140 Brassica napus
A01p15490 Brassica napus
A02p27220 Brassica napus
A03p48170 Brassica napus
A04p16080 Brassica napus
A07p17590 Brassica napus
A09p44200 Brassica napus
A09p58320 Brassica napus
Aa31LG1G14800 Aethionema arabicum
Aa31LG4G19230 Aethionema arabicum
Aa31LG6G16300 Aethionema arabicum
Aa31LG7G15190 Aethionema arabicum
Aa31LG7G15380 Aethionema arabicum
Aa31LG9G12610 Aethionema arabicum
Actinidia02245 Actinidia chinensis
Actinidia15391 Actinidia chinensis
Actinidia17461 Actinidia chinensis
Actinidia22998 Actinidia chinensis
Actinidia27857 Actinidia chinensis
Ah.01g018820 Amaranthus hybridus
Ah.02g124570 Amaranthus hybridus
Ah.03g141610 Amaranthus hybridus
Ah.05g171930 Amaranthus hybridus
AL4G10440 Arabidopsis lyrata
AL5G31580 Arabidopsis lyrata
AL7G10850 Arabidopsis lyrata
AL7G29120 Arabidopsis lyrata
AL8G18850 Arabidopsis lyrata
AL8G45210 Arabidopsis lyrata
Aqoxy5G01479 Aquilegia oxysepala
Aqoxy6G02365 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.475DJ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4K87U1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4T0CVS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.721SP0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.72AJJX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8FC258 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K48ZDK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M376CB Arachis hypogaea
AT2G21300 Arabidopsis thaliana
AT3G51150 Arabidopsis thaliana
AT4G24170 Arabidopsis thaliana
AT4G38950 Arabidopsis thaliana
AT5G42490 Arabidopsis thaliana
AT5G66310 Arabidopsis thaliana
ATR0149G021 Amborella trichopoda
Atru.chr1.4097 Acer truncatum
Atru.chr13.354 Acer truncatum
Atru.chr3.774 Acer truncatum
Atru.chr5.3142 Acer truncatum
AUR62007655 Chenopodium quinoa
AUR62010389 Chenopodium quinoa
AUR62014424 Chenopodium quinoa
AUR62016829 Chenopodium quinoa
AUR62019160 Chenopodium quinoa
AUR62034573 Chenopodium quinoa
AUR62043234 Chenopodium quinoa
BcaB01g00546 Brassica carinata
BcaB02g10038 Brassica carinata
BcaB07g30613 Brassica carinata
BcaB08g34981 Brassica carinata
BcaC02g08798 Brassica carinata
BcaC02g08799 Brassica carinata
BcaC02g08800 Brassica carinata
BcaC03g16494 Brassica carinata
BcaC06g33051 Brassica carinata
BcaC06g34692 Brassica carinata
BcaC07g41157 Brassica carinata
BcaC09g50902 Brassica carinata
BcaNung01122 Brassica carinata
BcaNung01293 Brassica carinata
BcaNung01953 Brassica carinata
BolC1t00025H Brassica oleracea
BolC1t01867H Brassica oleracea
BolC2t10354H Brassica oleracea
BolC4t26653H Brassica oleracea
BolC7t43075H Brassica oleracea
BolC7t45136H Brassica oleracea
BolC7t46760H Brassica oleracea
BolC8t50259H Brassica oleracea
BolC8t51728H Brassica oleracea
BraA01t00020Z Brassica rapa
BraA01t01488Z Brassica rapa
BraA02t07738Z Brassica rapa
BraA03t13925Z Brassica rapa
BraA04t17248Z Brassica rapa
BraA06t27748Z Brassica rapa
BraA07t29478Z Brassica rapa
BraA09t39881Z Brassica rapa
BraA09t41223Z Brassica rapa
C01p00200 Brassica napus
C01p19390 Brassica napus
C02p43100 Brassica napus
C04p50540 Brassica napus
C07p25550 Brassica napus
C07p46200 Brassica napus
C07p63460 Brassica napus
C08p26420 Brassica napus
C08p41650 Brassica napus
CAN.G1505.18 Capsicum annuum
CAN.G170.99 Capsicum annuum
CAN.G693.6 Capsicum annuum
CAN.G851.7 Capsicum annuum
CANSAT01G1619 Cannabis sativa
CANSAT11G0520 Cannabis sativa
CARHR112170 Cardamine hirsuta
CARHR160750 Cardamine hirsuta
CARHR181870 Cardamine hirsuta
CARHR231570 Cardamine hirsuta
CARHR247820 Cardamine hirsuta
CARHR281400 Cardamine hirsuta
Carub.0004s0034 Capsella rubella
Carub.0005s1755 Capsella rubella
Carub.0007s0077 Capsella rubella
Carub.0007s1693 Capsella rubella
Carub.0008s0656 Capsella rubella
Carub.0008s2818 Capsella rubella
Ca_02059_v3 Cicer arietinum L.
Ca_05174_v3 Cicer arietinum L.
Ca_20934_v3 Cicer arietinum L.
Ca_22365_v3 Cicer arietinum L.
Ca_24902_v3 Cicer arietinum L.
Cc02_g16920 Coffea canephora
Cc07_g10490 Coffea canephora
Cc10_g02090 Coffea canephora
CDE02G1335 Ceratophyllum demersum
CDE02G1664 Ceratophyllum demersum
CDE05G2814 Ceratophyllum demersum
CDE06G1326 Ceratophyllum demersum
Cfa006951 Carpinus fangiana
Cfa013907 Carpinus fangiana
Ciclev10000097m.g Citrus clementina
Ciclev10024791m.g Citrus clementina
Ciclev10027758m.g Citrus clementina
CiPaw.06G128100 Carya illinoinensis
CiPaw.07G056700 Carya illinoinensis
CiPaw.07G154000 Carya illinoinensis
CiPaw.08G063200 Carya illinoinensis
CiPaw.08G133700 Carya illinoinensis
ClCG02G004570 Citrullus lanatus
ClCG07G008290 Citrullus lanatus
ClCG08G014510 Citrullus lanatus
COL.COLO4_21954 Corchorus olitorius
COL.COLO4_26044 Corchorus olitorius
COL.COLO4_26195 Corchorus olitorius
Cpa.g.sc140.22 Carica papaya
Cpa.g.sc150.17 Carica papaya
Cpa.g.sc150.18 Carica papaya
Cpa.g.sc6.222 Carica papaya
CsaV3_2G029280 Cucumis sativus L.
CsaV3_4G005820 Cucumis sativus L.
CsaV3_7G000390 Cucumis sativus L.
CSS0000401 Camellia sinensis var. sinensis
CSS0000843 Camellia sinensis var. sinensis
CSS0001373 Camellia sinensis var. sinensis
CSS0003151 Camellia sinensis var. sinensis
CSS0004380 Camellia sinensis var. sinensis
CSS0009887 Camellia sinensis var. sinensis
CSS0012684 Camellia sinensis var. sinensis
CSS0012846 Camellia sinensis var. sinensis
CSS0022969 Camellia sinensis var. sinensis
CSS0025219 Camellia sinensis var. sinensis
CSS0034844 Camellia sinensis var. sinensis
CSS0035349 Camellia sinensis var. sinensis
CSS0035588 Camellia sinensis var. sinensis
CSS0039430 Camellia sinensis var. sinensis
CSS0040574 Camellia sinensis var. sinensis
CSS0040742 Camellia sinensis var. sinensis
CSS0044111 Camellia sinensis var. sinensis
CSS0050190 Camellia sinensis var. sinensis
DCAR_000465 Daucus carota
DCAR_003684 Daucus carota
DCAR_017343 Daucus carota
DCAR_022444 Daucus carota
DCAR_022916 Daucus carota
DCAR_025993 Daucus carota
Dinv23454 Davidia involucrata
Dinv33608 Davidia involucrata
Dinv39490 Davidia involucrata
Dinv40065 Davidia involucrata
Dinv42000 Davidia involucrata
Duzib041G0767 Durio zibethinus
Duzib093G0802 Durio zibethinus
Duzib132G0506 Durio zibethinus
Duzib187G1330 Durio zibethinus
Duzib248G1170 Durio zibethinus
Duzib264G0485 Durio zibethinus
ECA233G5423 Erigeron canadensis
ECA238G2881 Erigeron canadensis
ECA247G3662 Erigeron canadensis
EL10Ac1g00551 Beta vulgaris
EL10Ac9g21637 Beta vulgaris
EL10As8g23844 Beta vulgaris
Eucgr.I01329 Eucalyptus grandis
Eucgr.J02401 Eucalyptus grandis
Eucgr.J02403 Eucalyptus grandis
FAN15G1376 Fragaria x ananassa
FAN15G1746 Fragaria x ananassa
FAN19G0101 Fragaria x ananassa
FAN20G0607 Fragaria x ananassa
FAN20G2651 Fragaria x ananassa
FAN23G1694 Fragaria x ananassa
FAN24G2539 Fragaria x ananassa
FAN26G0612 Fragaria x ananassa
FAN27G0860 Fragaria x ananassa
FAN27G2307 Fragaria x ananassa
FAN28G2600 Fragaria x ananassa
FvH4_1g12070 Fragaria vesca
FvH4_2g10420 Fragaria vesca
FvH4_2g39060 Fragaria vesca
Glyma.01G168200 Glycine max
Glyma.02G050400 Glycine max
Glyma.04G008200 Glycine max
Glyma.04G026800 Glycine max
Glyma.06G008000 Glycine max
Glyma.06G026700 Glycine max
Glyma.11G075100 Glycine max
Glyma.11G110800 Glycine max
Glyma.12G037100 Glycine max
Glyma.16G130500 Glycine max
Gohir.A03G199200 Gossypium hirsutum
Gohir.A05G188300 Gossypium hirsutum
Gohir.A06G006100 Gossypium hirsutum
Gohir.A11G177400 Gossypium hirsutum
Gohir.A12G060650 Gossypium hirsutum
Gohir.A13G090700 Gossypium hirsutum
Gohir.D02G220500 Gossypium hirsutum
Gohir.D05G191400 Gossypium hirsutum
Gohir.D06G001900 Gossypium hirsutum
Gohir.D11G185200 Gossypium hirsutum
Gohir.D12G060800 Gossypium hirsutum
Gohir.D13G096900 Gossypium hirsutum
Gorai.002G148900 Gossypium raimondii
Gorai.005G248400 Gossypium raimondii
Gorai.007G196800 Gossypium raimondii
Gorai.008G063800 Gossypium raimondii
Gorai.009G196700 Gossypium raimondii
Gorai.010G006400 Gossypium raimondii
GSVIVG01009828001 Vitis vinifera
GSVIVG01018815001 Vitis vinifera
GSVIVG01024172001 Vitis vinifera
HanXRQChr02g0041791 Helianthus annuus
HanXRQChr04g0106471 Helianthus annuus
HanXRQChr06g0174901 Helianthus annuus
HanXRQChr13g0414701 Helianthus annuus
HanXRQChr16g0501731 Helianthus annuus
Haze_02246 Corylus avellana
Haze_02249 Corylus avellana
Haze_03801 Corylus avellana
Haze_22587 Corylus avellana
Hma1.2p1_0032F.1_g020130 Hydrangea macrophylla
Hma1.2p1_0773F.1_g216170 Hydrangea macrophylla
HPP92_022298 Vanilla planifolia
HPP92_025416 Vanilla planifolia
Hund00180 Selenicereus undatus
Hund00188 Selenicereus undatus
Hund06282 Selenicereus undatus
Hund14034 Selenicereus undatus
Hund16480 Selenicereus undatus
Hund17222 Selenicereus undatus
Hund26865 Selenicereus undatus
Lalb_Chr03g0025351 Lupinus albus
Lalb_Chr05g0212451 Lupinus albus
Lalb_Chr09g0321871 Lupinus albus
Lalb_Chr11g0062061 Lupinus albus
Lalb_Chr16g0377601 Lupinus albus
Lalb_Chr16g0391141 Lupinus albus
Lalb_Chr16g0391151 Lupinus albus
Lalb_Chr19g0138961 Lupinus albus
Lalb_Chr23g0265131 Lupinus albus
Lalb_Chr23g0265151 Lupinus albus
Lj1g0000591 Lotus japonicus
Lj1g0023355 Lotus japonicus
Lj2A472T32 Lonicera japonica
Lj2C465G2 Lonicera japonica
Lj2g0001012 Lotus japonicus
Lj3g0011348 Lotus japonicus
Lj4A216T56 Lonicera japonica
Lj4C791G14 Lonicera japonica
Lj4g0008815 Lotus japonicus
Lj9C383T6 Lonicera japonica
Lsat_1_v5_gn_1_16281 Lactuca sativa
Lsat_1_v5_gn_2_78600 Lactuca sativa
Lsat_1_v5_gn_4_116101 Lactuca sativa
Lsat_1_v5_gn_8_127960 Lactuca sativa
Manes.01G143900 Manihot esculenta
Manes.02G101900 Manihot esculenta
Manes.04G083600 Manihot esculenta
Manes.05G152000 Manihot esculenta
Manes.11G082000 Manihot esculenta
Manes.18G017300 Manihot esculenta
MBI05_g14982_MAGBIO Magnolia biondii
MCO05G259 Micromonas commoda
MD00G1086100 Malus domestica
MD00G1176100 Malus domestica
MD02G1110400 Malus domestica
MD02G1135300 Malus domestica
MD10G1063300 Malus domestica
MD15G1017200 Malus domestica
MD15G1248100 Malus domestica
Medtr3g113110 Medicago truncatula
Medtr4g071900 Medicago truncatula
Medtr5g021650 Medicago truncatula
Medtr8g076190 Medicago truncatula
MELO3C010988.2 Cucumis melo
MELO3C013420.2 Cucumis melo
MELO3C016369.2 Cucumis melo
Migut.B00175 Erythranthe guttata
Migut.C00792 Erythranthe guttata
Migut.H02477 Erythranthe guttata
Migut.L00042 Erythranthe guttata
Migut.N01276 Erythranthe guttata
MSTRG.1225 Avicennia marina
MSTRG.15767 Avicennia marina
MSTRG.20041 Avicennia marina
MSTRG.23286 Avicennia marina
MSTRG.27676 Avicennia marina
MSTRG.5423 Avicennia marina
Nitab4.5_0000136g0040 Nicotiana tabacum
Nitab4.5_0001154g0050 Nicotiana tabacum
Nitab4.5_0001370g0030 Nicotiana tabacum
Nitab4.5_0002880g0100 Nicotiana tabacum
Nitab4.5_0005266g0120 Nicotiana tabacum
Nitab4.5_0005932g0070 Nicotiana tabacum
Nitab4.5_0006358g0010 Nicotiana tabacum
Nitab4.5_0011205g0030 Nicotiana tabacum
Nitab4.5_0011770g0020 Nicotiana tabacum
Nn5g29234 Nelumbo nucifera
Nn6g32254 Nelumbo nucifera
Oeu010047.1 Olea europaea
Oeu021935.1 Olea europaea
Oeu030388.1 Olea europaea
Oeu030390.2 Olea europaea
Oeu046132.1 Olea europaea
Oeu048309.1 Olea europaea
Oeu052723.1 Olea europaea
Os02g0644400 Oryza sativa ssp. japonica
Os02g0645100 Oryza sativa ssp. japonica
Os04g0538800 Oryza sativa ssp. japonica
Os08g0547500 Oryza sativa ssp. japonica
Os09g0528000 Oryza sativa ssp. japonica
Peaxi162Scf00016g00049 Petunia axillaris
Peaxi162Scf00083g01124 Petunia axillaris
Peaxi162Scf00287g00136 Petunia axillaris
Peaxi162Scf00684g00131 Petunia axillaris
Peaxi162Scf00799g00113 Petunia axillaris
PGR031G1788 Punica granatum
PGR102G0678 Punica granatum
PGR142G2100 Punica granatum
PGSC0003DMG400003550 Solanum tuberosum
PGSC0003DMG400003713 Solanum tuberosum
PGSC0003DMG400005572 Solanum tuberosum
PGSC0003DMG400012011 Solanum tuberosum
Phvul.002G111200 Phaseolus vulgaris
Phvul.003G260200 Phaseolus vulgaris
Phvul.009G003000 Phaseolus vulgaris
Phvul.009G014400 Phaseolus vulgaris
Phvul.011G038800 Phaseolus vulgaris
Potri.002G027600 Populus trichocarpa
Potri.004G162800 Populus trichocarpa
Potri.005G116900 Populus trichocarpa
Potri.007G014800 Populus trichocarpa
Potri.009G124500 Populus trichocarpa
Prupe.1G370500 Prunus persica
Prupe.7G166000 Prunus persica
Prupe.8G084900 Prunus persica
Psat2g155680 Pisum sativum
Psat4g097520 Pisum sativum
Psat5g014680 Pisum sativum
Psat7g139880 Pisum sativum
PSO170G5584 Papaver somniferum
PSO210G5696 Papaver somniferum
PSO541G3624 Papaver somniferum
PSO675G2387 Papaver somniferum
QL02p010757 Quercus lobata
QL06p033858 Quercus lobata
QL11p046403 Quercus lobata
RcHm_v2.0_Chr2g0099691 Rosa chinensis
RcHm_v2.0_Chr6g0267891 Rosa chinensis
RcHm_v2.0_Chr6g0302161 Rosa chinensis
Rhsim05G0068300 Rhododendron simsii
Rhsim06G0026200 Rhododendron simsii
Rhsim10G0214100 Rhododendron simsii
Sabra02G0021800 Salix brachista
Sabra04G0109300 Salix brachista
Sabra05G0095700 Salix brachista
Sabra07G0012000 Salix brachista
Sabra09G0095600 Salix brachista
SalBow3G3427 Salvia bowleyana
SalBow5G0277 Salvia bowleyana
SalBow6G1982 Salvia bowleyana
SalBow6G6583 Salvia bowleyana
SalBow7G1657 Salvia bowleyana
SalBow8G1168 Salvia bowleyana
Sc03g0003510 Simmondsia chinensis
Sc08g0000890 Simmondsia chinensis
Sc26g0003270 Simmondsia chinensis
Sed0004012 Sechium edule
Sed0004522 Sechium edule
Sed0007011 Sechium edule
Sed0015407 Sechium edule
Sed0025202 Sechium edule
Sed0028185 Sechium edule
SEGI_17109 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05873 Striga asiatica
SGA_v2.0_scaffold2G01251 Striga asiatica
SGA_v2.0_scaffold47G17678 Striga asiatica
SGA_v2.0_scaffold80G25876 Striga asiatica
SGA_v2.0_scaffold81G26134 Striga asiatica
SHI08095 Sapria himalayana
SHI08574 Sapria himalayana
Solyc01g110380.3 Solanum lycopersicum
Solyc02g062330.3 Solanum lycopersicum
Solyc02g084390.3 Solanum lycopersicum
Solyc04g081060.3 Solanum lycopersicum
Sopen01g052530 Solanum pennellii
Sopen02g013320 Solanum pennellii
Sopen02g029100 Solanum pennellii
Sopen04g034680 Solanum pennellii
Sp2g06900 Schrenkiella parvula
Sp2g30350 Schrenkiella parvula
Sp4g00490 Schrenkiella parvula
Sp5g11060 Schrenkiella parvula
Sp7g22130 Schrenkiella parvula
Sp7g36890 Schrenkiella parvula
SpUn0014_0050 Schrenkiella parvula
SpUn0090_0010 Schrenkiella parvula
SpUn0153_0010 Schrenkiella parvula
TAR145G0003 Trochodendron aralioides
TAR376G0597 Trochodendron aralioides
TAR625G0658 Trochodendron aralioides
TAR628G0511 Trochodendron aralioides
TAR628G1350 Trochodendron aralioides
THA.LOC104804112 Tarenaya hassleriana
THA.LOC104807771 Tarenaya hassleriana
THA.LOC104810653 Tarenaya hassleriana
THA.LOC104819184 Tarenaya hassleriana
THA.LOC104821320 Tarenaya hassleriana
Thecc.01G022100 Theobroma cacao
Thecc.02G075200 Theobroma cacao
Thecc.08G037900 Theobroma cacao
Thhalv10000043m.g Eutrema salsugineum
Thhalv10003349m.g Eutrema salsugineum
Thhalv10003607m.g Eutrema salsugineum
Thhalv10010086m.g Eutrema salsugineum
Thhalv10024409m.g Eutrema salsugineum
Thhalv10026976m.g Eutrema salsugineum
TPR.G22383 Trifolium pratense
TPR.G2343 Trifolium pratense
TPR.G30046 Trifolium pratense
TPR.G30290 Trifolium pratense
TWI09G1077 Tripterygium wilfordii
TWI12G0905 Tripterygium wilfordii
TWI31G0813 Tripterygium wilfordii
TWI53G1266 Tripterygium wilfordii
unitig_0.g2343 Utricularia gibba
unitig_0.g2344 Utricularia gibba
unitig_21.g20019 Utricularia gibba
unitig_27.g25319 Utricularia gibba
unitig_37.g13005 Utricularia gibba
unitig_699.g19560 Utricularia gibba
unitig_7.g29873 Utricularia gibba
unitig_748.g8666 Utricularia gibba
vmacro17424 Vaccinium macrocarpon
vmacro21701 Vaccinium macrocarpon
vmacro21909 Vaccinium macrocarpon
VMungo0251G3354 Vigna mungo
VMungo1127G0831 Vigna mungo
VMungo1215G2142 Vigna mungo
VMungo1309G1098 Vigna mungo
VMungo1309G1154 Vigna mungo
Zm00001eb075380 Zea mays
Zm00001eb103350 Zea mays
Zm00001eb186130 Zea mays
Zm00001eb319410 Zea mays
Zm00001eb427560 Zea mays

User provided reference genes

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