Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29250 Brassica napus
A01p29280 Brassica napus
A01p29320 Brassica napus
A08p18790 Brassica napus
A09p17470 Brassica napus
A09p17480 Brassica napus
Aa31LG2G9920 Aethionema arabicum
Aa31LG2G9940 Aethionema arabicum
Aa31LG2G9950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1477 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2688 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2689 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2691 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2693 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2170 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2171 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2173 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2174 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2350 Anthoceros agrestis
Actinidia16973 Actinidia chinensis
Ah.04g158740 Amaranthus hybridus
Ah.04g158750 Amaranthus hybridus
Ah.06g195700 Amaranthus hybridus
Ah.06g195710 Amaranthus hybridus
Ah.06g195720 Amaranthus hybridus
Ah.06g195730 Amaranthus hybridus
Ah.06g195750 Amaranthus hybridus
Ah.06g195820 Amaranthus hybridus
Ah.11g039810 Amaranthus hybridus
AL2G16115 Arabidopsis lyrata
AL2G16130 Arabidopsis lyrata
AL2G16140 Arabidopsis lyrata
AL2G16150 Arabidopsis lyrata
AL2G16160 Arabidopsis lyrata
AL2G16170 Arabidopsis lyrata
AL2G16180 Arabidopsis lyrata
Aqoxy2G03860 Aquilegia oxysepala
Aqoxy2G03861 Aquilegia oxysepala
Aqoxy2G03862 Aquilegia oxysepala
Aqoxy2G03863 Aquilegia oxysepala
Aqoxy2G03868 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35RYQ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5M8WZ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3ZGNR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ECZ3V7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JR5BIL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N4K2VQ Arachis hypogaea
AT1G60500 Arabidopsis thaliana
AT1G60530 Arabidopsis thaliana
AUR62000359 Chenopodium quinoa
AUR62006704 Chenopodium quinoa
AUR62006708 Chenopodium quinoa
AUR62006715 Chenopodium quinoa
AUR62006717 Chenopodium quinoa
AUR62008456 Chenopodium quinoa
AUR62035027 Chenopodium quinoa
AUR62040534 Chenopodium quinoa
AUR62040535 Chenopodium quinoa
AUR62040538 Chenopodium quinoa
AUR62040539 Chenopodium quinoa
BcaB03g12682 Brassica carinata
BcaB04g20268 Brassica carinata
BcaB04g20270 Brassica carinata
BcaB07g31220 Brassica carinata
BcaB07g31221 Brassica carinata
BcaC04g22232 Brassica carinata
BcaC04g22234 Brassica carinata
BcaC09g49399 Brassica carinata
BcaC09g49404 Brassica carinata
BolC1t03667H Brassica oleracea
BolC3t21125H Brassica oleracea
BolC4t23571H Brassica oleracea
BolC9t55080H Brassica oleracea
BolC9t55082H Brassica oleracea
BraA01t03056Z Brassica rapa
BraA01t03061Z Brassica rapa
BraA01t03064Z Brassica rapa
BraA08t33840Z Brassica rapa
BraA09t37373Z Brassica rapa
BraA09t37374Z Brassica rapa
C01p37050 Brassica napus
C01p37080 Brassica napus
C03p88170 Brassica napus
C04p20440 Brassica napus
C09p21750 Brassica napus
C09p21760 Brassica napus
CAN.G1069.4 Capsicum annuum
CAN.G1069.5 Capsicum annuum
CAN.G1069.6 Capsicum annuum
CAN.G1069.7 Capsicum annuum
CAN.G1245.3 Capsicum annuum
CAN.G1252.6 Capsicum annuum
CAN.G309.51 Capsicum annuum
CAN.G309.52 Capsicum annuum
CAN.G309.53 Capsicum annuum
CAN.G309.54 Capsicum annuum
CAN.G3454.2 Capsicum annuum
CAN.G3454.3 Capsicum annuum
CAN.G534.25 Capsicum annuum
CAN.G771.44 Capsicum annuum
CAN.G841.18 Capsicum annuum
CANSAT11G2078 Cannabis sativa
CANSAT35G0643 Cannabis sativa
CANSAT35G0677 Cannabis sativa
CARHR052470 Cardamine hirsuta
CARHR052480 Cardamine hirsuta
CARHR052490 Cardamine hirsuta
CARHR052500 Cardamine hirsuta
CARHR288780 Cardamine hirsuta
CARHR288790 Cardamine hirsuta
CARHR288820 Cardamine hirsuta
CARHR288920 Cardamine hirsuta
CARHR288930 Cardamine hirsuta
CARHR288940 Cardamine hirsuta
CARHR289000 Cardamine hirsuta
Carub.0002s0478 Capsella rubella
Carub.0002s0479 Capsella rubella
Carub.0002s0481 Capsella rubella
Carub.0002s0482 Capsella rubella
Carub.0002s0483 Capsella rubella
Carub.0002s0484 Capsella rubella
Ca_17881_v3 Cicer arietinum L.
CBR_g32162 Chara braunii
CBR_g46742 Chara braunii
CBR_g694 Chara braunii
Cc00_g14140 Coffea canephora
Cc09_g03330 Coffea canephora
Cc09_g03340 Coffea canephora
Cc09_g03350 Coffea canephora
Cc09_g03360 Coffea canephora
ClCG03G007340 Citrullus lanatus
ClCG11G009910 Citrullus lanatus
ClCG11G009920 Citrullus lanatus
COL.COLO4_04042 Corchorus olitorius
COL.COLO4_06647 Corchorus olitorius
COL.COLO4_06648 Corchorus olitorius
COL.COLO4_06649 Corchorus olitorius
COL.COLO4_07808 Corchorus olitorius
CsaV3_1G032960 Cucumis sativus L.
CsaV3_2G010400 Cucumis sativus L.
CSS0007872 Camellia sinensis var. sinensis
CSS0018943 Camellia sinensis var. sinensis
CSS0044081 Camellia sinensis var. sinensis
Dinv09846 Davidia involucrata
Dinv09847 Davidia involucrata
Dinv09861 Davidia involucrata
Dinv36339 Davidia involucrata
Duzib177G0026 Durio zibethinus
Duzib177G0688 Durio zibethinus
Duzib177G1060 Durio zibethinus
Duzib187G0277 Durio zibethinus
ECA236G0395 Erigeron canadensis
ECA236G2846 Erigeron canadensis
ECA238G0203 Erigeron canadensis
ECA238G2581 Erigeron canadensis
ECA240G1633 Erigeron canadensis
ECA240G1903 Erigeron canadensis
ECA240G2071 Erigeron canadensis
ECA240G4407 Erigeron canadensis
EL10Ac1g02177 Beta vulgaris
EL10Ac4g09414 Beta vulgaris
EL10Ac4g09415 Beta vulgaris
EL10Ac4g09416 Beta vulgaris
EL10Ac5g11288 Beta vulgaris
EL10Ac6g13993 Beta vulgaris
EL10Ac7g17551 Beta vulgaris
EL10Ac9g20773 Beta vulgaris
EL10Ac9g20867 Beta vulgaris
EL10As2g23200 Beta vulgaris
Eucgr.B01385 Eucalyptus grandis
Eucgr.B01389 Eucalyptus grandis
Eucgr.B01390 Eucalyptus grandis
Eucgr.B01391 Eucalyptus grandis
Eucgr.B01392 Eucalyptus grandis
Eucgr.B01394 Eucalyptus grandis
Eucgr.B01395 Eucalyptus grandis
Eucgr.B01397 Eucalyptus grandis
Eucgr.B01398 Eucalyptus grandis
Eucgr.B01399 Eucalyptus grandis
Eucgr.B01400 Eucalyptus grandis
Eucgr.B01401 Eucalyptus grandis
Eucgr.B01626 Eucalyptus grandis
Eucgr.B01633 Eucalyptus grandis
Eucgr.D01329 Eucalyptus grandis
Eucgr.D01330 Eucalyptus grandis
Eucgr.D01332 Eucalyptus grandis
Eucgr.D01333 Eucalyptus grandis
Eucgr.L01450 Eucalyptus grandis
Eucgr.L01452 Eucalyptus grandis
Eucgr.L01453 Eucalyptus grandis
Eucgr.L02484 Eucalyptus grandis
FAN01G0529 Fragaria x ananassa
FAN03G1302 Fragaria x ananassa
FAN03G1524 Fragaria x ananassa
FAN03G1839 Fragaria x ananassa
FAN03G2717 Fragaria x ananassa
FAN03G2761 Fragaria x ananassa
FAN03G3114 Fragaria x ananassa
FAN06G0562 Fragaria x ananassa
FAN06G2300 Fragaria x ananassa
FAN06G2517 Fragaria x ananassa
FAN07G0084 Fragaria x ananassa
FAN07G1593 Fragaria x ananassa
FAN07G2871 Fragaria x ananassa
FAN10G0244 Fragaria x ananassa
FAN10G2494 Fragaria x ananassa
FAN10G4159 Fragaria x ananassa
FAN12G0337 Fragaria x ananassa
FAN12G2447 Fragaria x ananassa
FAN12G2744 Fragaria x ananassa
FAN17G0133 Fragaria x ananassa
FAN22G1006 Fragaria x ananassa
FvH4_4g34670 Fragaria vesca
FvH4_7g03430 Fragaria vesca
FvH4_7g03440 Fragaria vesca
FvH4_7g03780 Fragaria vesca
Glyma.05G162900 Glycine max
Glyma.08G120402 Glycine max
Glyma.13G224400 Glycine max
Glyma.13G224600 Glycine max
Gohir.A13G006000 Gossypium hirsutum
Gohir.A13G006100 Gossypium hirsutum
Gohir.A13G006201 Gossypium hirsutum
Gohir.D13G005500 Gossypium hirsutum
Gohir.D13G005600 Gossypium hirsutum
Gohir.D13G005700 Gossypium hirsutum
Gohir.D13G005733 Gossypium hirsutum
Gohir.D13G005766 Gossypium hirsutum
Gohir.D13G005901 Gossypium hirsutum
Gohir.D13G006000 Gossypium hirsutum
Gohir.D13G006200 Gossypium hirsutum
Gohir.D13G006266 Gossypium hirsutum
Gohir.D13G006400 Gossypium hirsutum
Gohir.D13G006501 Gossypium hirsutum
Gorai.013G006300 Gossypium raimondii
Gorai.013G006400 Gossypium raimondii
Gorai.013G006600 Gossypium raimondii
Gorai.013G006700 Gossypium raimondii
Gorai.N023000 Gossypium raimondii
Gorai.N023100 Gossypium raimondii
HanXRQChr03g0076121 Helianthus annuus
HanXRQChr03g0077381 Helianthus annuus
HanXRQChr03g0077391 Helianthus annuus
HanXRQChr03g0077401 Helianthus annuus
HanXRQChr03g0077421 Helianthus annuus
HanXRQChr03g0077431 Helianthus annuus
HanXRQChr03g0077441 Helianthus annuus
Hma1.2p1_0171F.1_g075620 Hydrangea macrophylla
Hma1.2p1_0171F.1_g075640 Hydrangea macrophylla
Hma1.2p1_0171F.1_g075680 Hydrangea macrophylla
Hma1.2p1_0171F.1_g075700 Hydrangea macrophylla
HPP92_011077 Vanilla planifolia
HPP92_011078 Vanilla planifolia
HPP92_011085 Vanilla planifolia
HPP92_011086 Vanilla planifolia
HPP92_011102 Vanilla planifolia
HPP92_011103 Vanilla planifolia
HPP92_011104 Vanilla planifolia
Hund21877 Selenicereus undatus
Lalb_Chr12g0204871 Lupinus albus
Lj1g0013698 Lotus japonicus
Lj1g0017529 Lotus japonicus
Lj4g0001350 Lotus japonicus
Lj4g0010642 Lotus japonicus
Lj5g0002805 Lotus japonicus
Lju124C39T10 Lonicera japonica
Lju124C39T8 Lonicera japonica
Lju124C39T9 Lonicera japonica
Lju124C40G5 Lonicera japonica
Lju124C40T5 Lonicera japonica
Lsat_1_v5_gn_2_99221 Lactuca sativa
Lsat_1_v5_gn_9_94160 Lactuca sativa
Lsat_1_v5_gn_9_94261 Lactuca sativa
Lsat_1_v5_gn_9_94301 Lactuca sativa
Lsat_1_v5_gn_9_98561 Lactuca sativa
Manes.09G133900 Manihot esculenta
Manes.09G183900 Manihot esculenta
Manes.09G183950 Manihot esculenta
Manes.09G184000 Manihot esculenta
MBI19_g06298_MAGBIO Magnolia biondii
MBI19_g10326_MAGBIO Magnolia biondii
MBI19_g27117_MAGBIO Magnolia biondii
MBI19_g27732_MAGBIO Magnolia biondii
MBI19_g47770_MAGBIO Magnolia biondii
MD02G1282600 Malus domestica
MD02G1282700 Malus domestica
MD02G1282900 Malus domestica
MD14G1008400 Malus domestica
MD14G1008800 Malus domestica
MD14G1008900 Malus domestica
MD14G1009000 Malus domestica
MD14G1009200 Malus domestica
MD14G1009300 Malus domestica
MD14G1009400 Malus domestica
Medtr4g085860 Medicago truncatula
Medtr6g045107 Medicago truncatula
Medtr8g087750 Medicago truncatula
Medtr8g087763 Medicago truncatula
Medtr8g087770 Medicago truncatula
MELO3C002687.2 Cucumis melo
MELO3C031194.2 Cucumis melo
Migut.A00730 Erythranthe guttata
Migut.A00731 Erythranthe guttata
Migut.A00732 Erythranthe guttata
Migut.A00756 Erythranthe guttata
Migut.A00757 Erythranthe guttata
Migut.A00758 Erythranthe guttata
Migut.O00663 Erythranthe guttata
MSTRG.25613 Avicennia marina
Nitab4.5_0000213g0060 Nicotiana tabacum
Nitab4.5_0000299g0140 Nicotiana tabacum
Nitab4.5_0000554g0050 Nicotiana tabacum
Nitab4.5_0000939g0020 Nicotiana tabacum
Nitab4.5_0001933g0100 Nicotiana tabacum
Nitab4.5_0002538g0110 Nicotiana tabacum
Nitab4.5_0004770g0120 Nicotiana tabacum
Nitab4.5_0004770g0130 Nicotiana tabacum
Nn1g07869 Nelumbo nucifera
Nn1g07870 Nelumbo nucifera
Nn1g07873 Nelumbo nucifera
Nn1g07874 Nelumbo nucifera
Nn1g08772 Nelumbo nucifera
Nn3g19048 Nelumbo nucifera
Nn3g19981 Nelumbo nucifera
Nn4g23701 Nelumbo nucifera
Nn6g35198 Nelumbo nucifera
Os03g0260000 Oryza sativa ssp. japonica
Os04g0129900 Oryza sativa ssp. japonica
Peaxi162Scf00078g00741 Petunia axillaris
Peaxi162Scf00078g00748 Petunia axillaris
Peaxi162Scf00096g00821 Petunia axillaris
Peaxi162Scf00247g00727 Petunia axillaris
PGR119G0215 Punica granatum
PGR119G0567 Punica granatum
PGR119G1371 Punica granatum
PGR119G1962 Punica granatum
PGSC0003DMG400019673 Solanum tuberosum
PGSC0003DMG400025058 Solanum tuberosum
PGSC0003DMG400025079 Solanum tuberosum
PGSC0003DMG400025080 Solanum tuberosum
PGSC0003DMG400025522 Solanum tuberosum
PGSC0003DMG400028251 Solanum tuberosum
PGSC0003DMG400038135 Solanum tuberosum
PGSC0003DMG400044318 Solanum tuberosum
PGSC0003DMG400044699 Solanum tuberosum
Phvul.002G242700 Phaseolus vulgaris
Phvul.006G170400 Phaseolus vulgaris
Potri.001G095900 Populus trichocarpa
Potri.003G024200 Populus trichocarpa
Potri.003G024600 Populus trichocarpa
Potri.003G024800 Populus trichocarpa
Potri.003G024900 Populus trichocarpa
Potri.013G119900 Populus trichocarpa
Potri.013G120000 Populus trichocarpa
Potri.013G124600 Populus trichocarpa
Pp3c7_15920 Physcomitrium patens
Pp3c7_15930 Physcomitrium patens
Pp3c7_15940 Physcomitrium patens
Pp3c7_16100 Physcomitrium patens
Pp3c7_16170 Physcomitrium patens
Pp3c7_16360 Physcomitrium patens
Pp3c7_16380 Physcomitrium patens
Pp3s115_30 Physcomitrium patens
Prupe.2G039500 Prunus persica
Prupe.2G039600 Prunus persica
Prupe.2G039700 Prunus persica
Prupe.2G039800 Prunus persica
Prupe.2G039900 Prunus persica
Prupe.2G040000 Prunus persica
Prupe.7G015100 Prunus persica
Prupe.7G015300 Prunus persica
Prupe.7G015500 Prunus persica
Psat7g067080 Pisum sativum
Psat7g067160 Pisum sativum
Psat7g067200 Pisum sativum
Psat7g067240 Pisum sativum
PSO832G4138 Papaver somniferum
QL05p051939 Quercus lobata
QL05p051963 Quercus lobata
QL05p051968 Quercus lobata
QL05p052013 Quercus lobata
QL05p052032 Quercus lobata
QL05p052049 Quercus lobata
RcHm_v2.0_Chr1g0325781 Rosa chinensis
RcHm_v2.0_Chr1g0326171 Rosa chinensis
RcHm_v2.0_Chr1g0326211 Rosa chinensis
RcHm_v2.0_Chr1g0327001 Rosa chinensis
RcHm_v2.0_Chr1g0327051 Rosa chinensis
RcHm_v2.0_Chr1g0327071 Rosa chinensis
RcHm_v2.0_Chr1g0327091 Rosa chinensis
RcHm_v2.0_Chr1g0327111 Rosa chinensis
RcHm_v2.0_Chr2g0127731 Rosa chinensis
RcHm_v2.0_Chr2g0127741 Rosa chinensis
RcHm_v2.0_Chr4g0444021 Rosa chinensis
Rhsim07G0108700 Rhododendron simsii
Rhsim07G0108800 Rhododendron simsii
Rhsim07G0108900 Rhododendron simsii
Rhsim07G0109000 Rhododendron simsii
Rhsim07G0109200 Rhododendron simsii
Rhsim07G0109300 Rhododendron simsii
Rhsim07G0109400 Rhododendron simsii
Rhsim07G0109500 Rhododendron simsii
Sabra01G0071500 Salix brachista
Sabra01G0071700 Salix brachista
Sabra03G0015400 Salix brachista
Sabra03G0015500 Salix brachista
Sabra03G0015600 Salix brachista
Sabra03G0015700 Salix brachista
Sabra03G0015800 Salix brachista
Sabra13G0101500 Salix brachista
SalBow3G0418 Salvia bowleyana
SalBow3G2568 Salvia bowleyana
SalBow3G2627 Salvia bowleyana
SalBow7G2726 Salvia bowleyana
Sc09g0001600 Simmondsia chinensis
Sc09g0001610 Simmondsia chinensis
Sed0008598 Sechium edule
Sed0015416 Sechium edule
Sed0019783 Sechium edule
SEGI_13159 Sequoiadendron giganteum
SEGI_17011 Sequoiadendron giganteum
SEGI_18193 Sequoiadendron giganteum
SEGI_18996 Sequoiadendron giganteum
SEGI_29269 Sequoiadendron giganteum
SEGI_33498 Sequoiadendron giganteum
SEGI_34634 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39178 Striga asiatica
SGA_v2.0_scaffold173G39180 Striga asiatica
SGA_v2.0_scaffold173G39184 Striga asiatica
SMO351G0329 Selaginella moellendorffii
Solyc04g072030.1 Solanum lycopersicum
Solyc04g072080.1 Solanum lycopersicum
Solyc04g072090.1 Solanum lycopersicum
Solyc04g072100.1 Solanum lycopersicum
Solyc11g070010.3 Solanum lycopersicum
Sopen04g028010 Solanum pennellii
Sopen04g028250 Solanum pennellii
Sopen04g028270 Solanum pennellii
Sopen11g028660 Solanum pennellii
Sopen11g028690 Solanum pennellii
Sp2g04220 Schrenkiella parvula
Sp2g04230 Schrenkiella parvula
TAR365G0004 Trochodendron aralioides
TAR365G0045 Trochodendron aralioides
TAR365G0481 Trochodendron aralioides
TAR365G0502 Trochodendron aralioides
TAR365G0810 Trochodendron aralioides
TAR365G0859 Trochodendron aralioides
TAR365G0962 Trochodendron aralioides
TAR365G1062 Trochodendron aralioides
TAR403G0001 Trochodendron aralioides
TAR627G0275 Trochodendron aralioides
TAR627G0693 Trochodendron aralioides
TAR636G1302 Trochodendron aralioides
THA.LOC104809604 Tarenaya hassleriana
THA.LOC104813279 Tarenaya hassleriana
THA.LOC104815466 Tarenaya hassleriana
Thecc.05G205100 Theobroma cacao
Thecc.05G205300 Theobroma cacao
Thecc.05G205400 Theobroma cacao
Thecc.05G205500 Theobroma cacao
Thecc.05G205700 Theobroma cacao
Thhalv10023322m.g Eutrema salsugineum
Thhalv10023925m.g Eutrema salsugineum
Thhalv10024158m.g Eutrema salsugineum
Thhalv10024169m.g Eutrema salsugineum
TPR.G19245 Trifolium pratense
TPR.G22036 Trifolium pratense
TPR.G23048 Trifolium pratense
TPR.G32078 Trifolium pratense
TPR.G36482 Trifolium pratense
TPR.G6757 Trifolium pratense
TPR.G6789 Trifolium pratense
TPR.G6799 Trifolium pratense
TPR.G797 Trifolium pratense
TWI75G0128 Tripterygium wilfordii
TWI75G1877 Tripterygium wilfordii
vmacro06045 Vaccinium macrocarpon
vmacro14079 Vaccinium macrocarpon
vmacro14080 Vaccinium macrocarpon
Zm00001eb011320 Zea mays
Zm00001eb011330 Zea mays

User provided reference genes

Program Settings