Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03390 Brassica napus
A03p63430 Brassica napus
A05p21360 Brassica napus
A08p05520 Brassica napus
A08p16300 Brassica napus
A08p16320 Brassica napus
Aa31LG2G15260 Aethionema arabicum
Aa31sc380G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2025 Anthoceros agrestis
Actinidia02361 Actinidia chinensis
Actinidia15482 Actinidia chinensis
Actinidia18018 Actinidia chinensis
Actinidia20549 Actinidia chinensis
Actinidia29854 Actinidia chinensis
Actinidia37966 Actinidia chinensis
Actinidia38040 Actinidia chinensis
Ah.01g007930 Amaranthus hybridus
Ah.01g007940 Amaranthus hybridus
Ah.01g023460 Amaranthus hybridus
Ah.01g023470 Amaranthus hybridus
Ah.03g138310 Amaranthus hybridus
Ah.11g040780 Amaranthus hybridus
AL1G54060 Arabidopsis lyrata
AL7G16020 Arabidopsis lyrata
Aqoxy5G01416 Aquilegia oxysepala
Aqoxy6G00917 Aquilegia oxysepala
Aqoxy6G01835 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3PSU39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5F38QW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5FH16S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EP1QJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1QGUN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GB2ICR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3AKFM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK6Q6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y38ELQ Arachis hypogaea
AT1G47670 Arabidopsis thaliana
AT4G35180 Arabidopsis thaliana
ATR0661G089 Amborella trichopoda
ATR0733G125 Amborella trichopoda
Atru.chr13.167 Acer truncatum
Atru.chr13.600 Acer truncatum
Atru.chr5.3487 Acer truncatum
AUR62009981 Chenopodium quinoa
AUR62009983 Chenopodium quinoa
AUR62012970 Chenopodium quinoa
AUR62012971 Chenopodium quinoa
AUR62013827 Chenopodium quinoa
AUR62033881 Chenopodium quinoa
AUR62036908 Chenopodium quinoa
AUR62040086 Chenopodium quinoa
BcaB02g11481 Brassica carinata
BcaB03g11781 Brassica carinata
BcaB03g11785 Brassica carinata
BcaB04g17506 Brassica carinata
BcaC01g00835 Brassica carinata
BcaC01g00837 Brassica carinata
BcaC05g27606 Brassica carinata
BcaC07g37203 Brassica carinata
BcaNung00620 Brassica carinata
BcaNung00624 Brassica carinata
BcaNung02382 Brassica carinata
BcaNung04609 Brassica carinata
BolC1t00362H Brassica oleracea
BolC3t20793H Brassica oleracea
BolC3t20794H Brassica oleracea
BolC5t32319H Brassica oleracea
BolC7t46528H Brassica oleracea
BolC8t47399H Brassica oleracea
BraA01t00326Z Brassica rapa
BraA03t15414Z Brassica rapa
BraA05t21044Z Brassica rapa
BraA08t32558Z Brassica rapa
BraA08t33601Z Brassica rapa
C01p03700 Brassica napus
C03p85000 Brassica napus
C05p35950 Brassica napus
C07p61030 Brassica napus
C08p06080 Brassica napus
CAN.G1235.27 Capsicum annuum
CAN.G2062.2 Capsicum annuum
CAN.G311.100 Capsicum annuum
CAN.G311.101 Capsicum annuum
CAN.G371.82 Capsicum annuum
CANSAT25G0058 Cannabis sativa
CANSAT25G0439 Cannabis sativa
CANSAT25G1064 Cannabis sativa
CANSAT25G1405 Cannabis sativa
CARHR037300 Cardamine hirsuta
CARHR243500 Cardamine hirsuta
Carub.0001s3644 Capsella rubella
Carub.0007s0512 Capsella rubella
Ca_00274_v3 Cicer arietinum L.
Ca_15445_v3 Cicer arietinum L.
Ca_18988_v3 Cicer arietinum L.
Ca_24955_v3 Cicer arietinum L.
Ca_24956_v3 Cicer arietinum L.
Cc09_g10490 Coffea canephora
Cc09_g10500 Coffea canephora
Cc10_g00850 Coffea canephora
Cc10_g03730 Coffea canephora
CDE01G0043 Ceratophyllum demersum
CDE02G0894 Ceratophyllum demersum
CDE02G1365 Ceratophyllum demersum
CDE04G0542 Ceratophyllum demersum
Cfa005324 Carpinus fangiana
Cfa005325 Carpinus fangiana
Cfa014044 Carpinus fangiana
Cfa018488 Carpinus fangiana
Ciclev10000841m.g Citrus clementina
Ciclev10003187m.g Citrus clementina
Ciclev10028167m.g Citrus clementina
Ciclev10028265m.g Citrus clementina
Ciclev10029785m.g Citrus clementina
CiPaw.05G088000 Carya illinoinensis
CiPaw.05G088100 Carya illinoinensis
CiPaw.06G118400 Carya illinoinensis
CiPaw.06G118600 Carya illinoinensis
CiPaw.07G005100 Carya illinoinensis
CiPaw.07G140500 Carya illinoinensis
CiPaw.07G140600 Carya illinoinensis
CiPaw.08G071700 Carya illinoinensis
CiPaw.08G179900 Carya illinoinensis
CiPaw.15G066100 Carya illinoinensis
CiPaw.16G051100 Carya illinoinensis
ClCG02G003660 Citrullus lanatus
ClCG05G019500 Citrullus lanatus
COL.COLO4_17988 Corchorus olitorius
COL.COLO4_17989 Corchorus olitorius
COL.COLO4_21606 Corchorus olitorius
COL.COLO4_21607 Corchorus olitorius
COL.COLO4_26431 Corchorus olitorius
Cpa.g.sc20.138 Carica papaya
Cpa.g.sc20.139 Carica papaya
Cpa.g.sc26.222 Carica papaya
Cpa.g.sc357.7 Carica papaya
CsaV3_4G033940 Cucumis sativus L.
CsaV3_7G001470 Cucumis sativus L.
CSS0010852 Camellia sinensis var. sinensis
CSS0019144 Camellia sinensis var. sinensis
CSS0033052 Camellia sinensis var. sinensis
CSS0039640 Camellia sinensis var. sinensis
DCAR_003204 Daucus carota
DCAR_019481 Daucus carota
DCAR_022409 Daucus carota
DCAR_022410 Daucus carota
DCAR_022837 Daucus carota
DCAR_023007 Daucus carota
Dinv08537 Davidia involucrata
Dinv14149 Davidia involucrata
Dinv31920 Davidia involucrata
Dinv31921 Davidia involucrata
Dinv36009 Davidia involucrata
Dinv39353 Davidia involucrata
Dinv39577 Davidia involucrata
Dinv40161 Davidia involucrata
Dinv41899 Davidia involucrata
Duzib041G0074 Durio zibethinus
Duzib041G0108 Durio zibethinus
Duzib052G0151 Durio zibethinus
Duzib093G1156 Durio zibethinus
Duzib116G0188 Durio zibethinus
Duzib132G0828 Durio zibethinus
Duzib132G1216 Durio zibethinus
Duzib147G0110 Durio zibethinus
Duzib248G1461 Durio zibethinus
ECA232G4859 Erigeron canadensis
ECA233G1849 Erigeron canadensis
ECA233G5040 Erigeron canadensis
ECA234G0468 Erigeron canadensis
ECA234G0799 Erigeron canadensis
ECA234G2583 Erigeron canadensis
ECA234G3026 Erigeron canadensis
ECA234G3241 Erigeron canadensis
ECA234G4008 Erigeron canadensis
ECA247G3461 Erigeron canadensis
EL10Ac1g01748 Beta vulgaris
EL10Ac1g01991 Beta vulgaris
EL10Ac9g21301 Beta vulgaris
EL10Ac9g21302 Beta vulgaris
EL10Ac9g21303 Beta vulgaris
Eucgr.F01730 Eucalyptus grandis
Eucgr.F01731 Eucalyptus grandis
Eucgr.F01732 Eucalyptus grandis
Eucgr.F02389 Eucalyptus grandis
Eucgr.G01812 Eucalyptus grandis
Eucgr.G01814 Eucalyptus grandis
Eucgr.G01819 Eucalyptus grandis
Eucgr.I02282 Eucalyptus grandis
FAN15G2237 Fragaria x ananassa
FAN15G2484 Fragaria x ananassa
FAN15G2720 Fragaria x ananassa
FAN15G2776 Fragaria x ananassa
FAN15G2886 Fragaria x ananassa
FAN19G2093 Fragaria x ananassa
FAN20G0169 Fragaria x ananassa
FAN20G1400 Fragaria x ananassa
FAN20G1547 Fragaria x ananassa
FAN20G3129 Fragaria x ananassa
FAN23G1023 Fragaria x ananassa
FAN24G2407 Fragaria x ananassa
FAN24G2482 Fragaria x ananassa
FAN26G1878 Fragaria x ananassa
FAN27G2613 Fragaria x ananassa
FAN27G2832 Fragaria x ananassa
FAN27G2833 Fragaria x ananassa
FAN28G2740 Fragaria x ananassa
FvH4_1g10770 Fragaria vesca
FvH4_2g16040 Fragaria vesca
FvH4_2g16050 Fragaria vesca
FvH4_2g16052 Fragaria vesca
FvH4_2g16053 Fragaria vesca
FvH4_2g16054 Fragaria vesca
FvH4_2g37650 Fragaria vesca
FvH4_2g37660 Fragaria vesca
FvH4_2g40670 Fragaria vesca
Glyma.01G161100 Glycine max
Glyma.04G019200 Glycine max
Glyma.04G019250 Glycine max
Glyma.06G019500 Glycine max
Glyma.11G082700 Glycine max
Glyma.11G097000 Glycine max
Glyma.12G023100 Glycine max
Glyma.13G245000 Glycine max
Glyma.15G068700 Glycine max
Gohir.A01G172300 Gossypium hirsutum
Gohir.A01G172400 Gossypium hirsutum
Gohir.A05G199200 Gossypium hirsutum
Gohir.A06G015300 Gossypium hirsutum
Gohir.D01G163300 Gossypium hirsutum
Gohir.D01G163400 Gossypium hirsutum
Gohir.D02G228300 Gossypium hirsutum
Gohir.D05G202000 Gossypium hirsutum
Gohir.D06G013400 Gossypium hirsutum
Gorai.002G202500 Gossypium raimondii
Gorai.002G202600 Gossypium raimondii
Gorai.005G256200 Gossypium raimondii
Gorai.009G207900 Gossypium raimondii
Gorai.010G016000 Gossypium raimondii
GSVIVG01005850001 Vitis vinifera
GSVIVG01008696001 Vitis vinifera
GSVIVG01009581001 Vitis vinifera
GSVIVG01023905001 Vitis vinifera
GSVIVG01023906001 Vitis vinifera
HanXRQChr02g0046481 Helianthus annuus
HanXRQChr04g0104231 Helianthus annuus
HanXRQChr09g0268321 Helianthus annuus
HanXRQChr10g0298281 Helianthus annuus
HanXRQChr10g0300461 Helianthus annuus
HanXRQChr10g0300531 Helianthus annuus
HanXRQChr12g0366581 Helianthus annuus
HanXRQChr16g0525231 Helianthus annuus
HanXRQChr17g0558661 Helianthus annuus
Haze_02056 Corylus avellana
Haze_02058 Corylus avellana
Haze_03683 Corylus avellana
Haze_17585 Corylus avellana
Haze_22745 Corylus avellana
Hma1.2p1_0260F.1_g104560 Hydrangea macrophylla
Hma1.2p1_0634F.1_g192880 Hydrangea macrophylla
Hma1.2p1_0634F.1_g192890 Hydrangea macrophylla
Hma1.2p1_1260F.1_g271061 Hydrangea macrophylla
HPP92_019908 Vanilla planifolia
HPP92_022162 Vanilla planifolia
Hund02776 Selenicereus undatus
Hund17618 Selenicereus undatus
Lalb_Chr01g0001211 Lupinus albus
Lalb_Chr03g0024611 Lupinus albus
Lalb_Chr05g0212051 Lupinus albus
Lalb_Chr15g0090041 Lupinus albus
Lalb_Chr20g0122191 Lupinus albus
Lalb_Chr23g0265861 Lupinus albus
Lj1g0020757 Lotus japonicus
Lj2g0008603 Lotus japonicus
Lj3g0012099 Lotus japonicus
Lj4A13T57 Lonicera japonica
Lj4A229T23 Lonicera japonica
Lj4A48T72 Lonicera japonica
Lj4A778T44 Lonicera japonica
Lj4C13T3 Lonicera japonica
Lj5A173T67 Lonicera japonica
Lj6g0013137 Lotus japonicus
Lj9A403T65 Lonicera japonica
Lj9C327T7 Lonicera japonica
Lj9C403T0 Lonicera japonica
Lsat_1_v5_gn_1_19221 Lactuca sativa
Lsat_1_v5_gn_4_123240 Lactuca sativa
Lsat_1_v5_gn_4_70620 Lactuca sativa
Lsat_1_v5_gn_4_70660 Lactuca sativa
Lsat_1_v5_gn_4_70741 Lactuca sativa
Lsat_1_v5_gn_4_71481 Lactuca sativa
Lsat_1_v5_gn_8_27720 Lactuca sativa
Manes.04G068600 Manihot esculenta
Manes.05G140200 Manihot esculenta
Manes.05G169100 Manihot esculenta
Manes.11G100300 Manihot esculenta
Manes.18G007160 Manihot esculenta
Manes.18G035300 Manihot esculenta
Mapoly0040s0055 Marchantia polymorpha
Mapoly0107s0041 Marchantia polymorpha
MBI05_g27808_MAGBIO Magnolia biondii
MBI16_g19896_MAGBIO Magnolia biondii
MD02G1121700 Malus domestica
MD05G1129500 Malus domestica
MD05G1129600 Malus domestica
MD05G1129800 Malus domestica
MD05G1129900 Malus domestica
MD08G1004100 Malus domestica
MD08G1004200 Malus domestica
MD08G1040200 Malus domestica
MD10G1132700 Malus domestica
MD10G1132900 Malus domestica
MD15G1003600 Malus domestica
MD15G1034600 Malus domestica
MD15G1235300 Malus domestica
Medtr2g012470 Medicago truncatula
Medtr3g115090 Medicago truncatula
Medtr4g075750 Medicago truncatula
Medtr5g023240 Medicago truncatula
Medtr5g023260 Medicago truncatula
MELO3C013304.2 Cucumis melo
MELO3C016720.2 Cucumis melo
Migut.B00032 Erythranthe guttata
Migut.B00033 Erythranthe guttata
Migut.C00645 Erythranthe guttata
Migut.C00925 Erythranthe guttata
Migut.C00926 Erythranthe guttata
MSTRG.1122 Avicennia marina
MSTRG.1320 Avicennia marina
MSTRG.16941 Avicennia marina
MSTRG.16942 Avicennia marina
MSTRG.25119 Avicennia marina
Nitab4.5_0000068g0150 Nicotiana tabacum
Nitab4.5_0000588g0260 Nicotiana tabacum
Nitab4.5_0001506g0090 Nicotiana tabacum
Nitab4.5_0001629g0070 Nicotiana tabacum
Nitab4.5_0002280g0020 Nicotiana tabacum
Nitab4.5_0003603g0050 Nicotiana tabacum
Nitab4.5_0003837g0020 Nicotiana tabacum
Nitab4.5_0004974g0020 Nicotiana tabacum
Nn5g30901 Nelumbo nucifera
Nn6g31826 Nelumbo nucifera
Nn6g31827 Nelumbo nucifera
Nn6g32123 Nelumbo nucifera
Oeu004533.2 Olea europaea
Oeu006162.1 Olea europaea
Oeu011321.1 Olea europaea
Oeu015525.1 Olea europaea
Oeu015546.1 Olea europaea
Oeu016883.1 Olea europaea
Oeu028455.3 Olea europaea
Oeu029663.1 Olea europaea
Oeu032661.1 Olea europaea
Oeu045076.2 Olea europaea
Os04g0562100 Oryza sativa ssp. japonica
Os12g0485600 Oryza sativa ssp. japonica
Peaxi162Scf00362g00351 Petunia axillaris
Peaxi162Scf00875g00228 Petunia axillaris
Peaxi162Scf00875g00229 Petunia axillaris
Peaxi162Scf01481g00036 Petunia axillaris
Peaxi162Scf01514g00025 Petunia axillaris
PGR031G1660 Punica granatum
PGR042G1788 Punica granatum
PGR042G3818 Punica granatum
PGR083G0412 Punica granatum
PGR083G0603 Punica granatum
PGR119G1255 Punica granatum
PGSC0003DMG400009969 Solanum tuberosum
PGSC0003DMG400010866 Solanum tuberosum
PGSC0003DMG400011690 Solanum tuberosum
PGSC0003DMG400018651 Solanum tuberosum
PGSC0003DMG402009896 Solanum tuberosum
Phvul.002G113000 Phaseolus vulgaris
Phvul.006G190600 Phaseolus vulgaris
Phvul.009G021300 Phaseolus vulgaris
Phvul.011G025100 Phaseolus vulgaris
Potri.002G012900 Populus trichocarpa
Potri.004G181000 Populus trichocarpa
Potri.004G181100 Populus trichocarpa
Potri.004G181200 Populus trichocarpa
Potri.009G140800 Populus trichocarpa
Potri.014G036500 Populus trichocarpa
Pp3c6_1540 Physcomitrium patens
Prupe.1G356000 Prunus persica
Prupe.1G356100 Prunus persica
Prupe.1G388700 Prunus persica
Prupe.7G177800 Prunus persica
Prupe.8G173300 Prunus persica
Prupe.8G173400 Prunus persica
Prupe.8G173500 Prunus persica
Prupe.8G173800 Prunus persica
Psat0s3811g0080 Pisum sativum
Psat1g207760 Pisum sativum
Psat2g150960 Pisum sativum
Psat2g151040 Pisum sativum
Psat7g178640 Pisum sativum
Psat7g178760 Pisum sativum
PSO170G4618 Papaver somniferum
PSO210G0878 Papaver somniferum
PSO541G0043 Papaver somniferum
PSO541G3311 Papaver somniferum
PSO541G4474 Papaver somniferum
PSO675G2968 Papaver somniferum
PSO675G5013 Papaver somniferum
PSO675G9251 Papaver somniferum
QL02p006354 Quercus lobata
QL02p013779 Quercus lobata
QL02p013796 Quercus lobata
QL06p052488 Quercus lobata
QL11p053464 Quercus lobata
QL11p053489 Quercus lobata
QL11p053507 Quercus lobata
QL11p053522 Quercus lobata
QL11p053569 Quercus lobata
QL11p053642 Quercus lobata
QL11p053879 Quercus lobata
RcHm_v2.0_Chr2g0097951 Rosa chinensis
RcHm_v2.0_Chr6g0279641 Rosa chinensis
RcHm_v2.0_Chr6g0279671 Rosa chinensis
RcHm_v2.0_Chr6g0279681 Rosa chinensis
RcHm_v2.0_Chr6g0279691 Rosa chinensis
RcHm_v2.0_Chr6g0279731 Rosa chinensis
RcHm_v2.0_Chr6g0299981 Rosa chinensis
RcHm_v2.0_Chr6g0304071 Rosa chinensis
RcHm_v2.0_Chr6g0304081 Rosa chinensis
Rhsim06G0008800 Rhododendron simsii
Rhsim07G0233600 Rhododendron simsii
Rhsim07G0254100 Rhododendron simsii
Rhsim11G0195600 Rhododendron simsii
Sabra02G0010100 Salix brachista
Sabra04G0121700 Salix brachista
Sabra04G0121800 Salix brachista
Sabra04G0121900 Salix brachista
Sabra09G0109600 Salix brachista
Sabra14G0026300 Salix brachista
SalBow1G2438 Salvia bowleyana
SalBow1G3834 Salvia bowleyana
SalBow7G0956 Salvia bowleyana
SalBow7G1534 Salvia bowleyana
SalBow7G4398 Salvia bowleyana
Sc02g0006790 Simmondsia chinensis
Sc08g0002580 Simmondsia chinensis
Sc08g0002590 Simmondsia chinensis
Sc15g0004590 Simmondsia chinensis
Sed0000967 Sechium edule
Sed0001504 Sechium edule
Sed0018408 Sechium edule
SEGI_10436 Sequoiadendron giganteum
SEGI_27655 Sequoiadendron giganteum
SGA_v2.0_scaffold188G40320 Striga asiatica
SGA_v2.0_scaffold275G46579 Striga asiatica
SGA_v2.0_scaffold58G20329 Striga asiatica
SMO146G0264 Selaginella moellendorffii
SMO146G0276 Selaginella moellendorffii
Solyc01g111980.3 Solanum lycopersicum
Solyc04g079560.3 Solanum lycopersicum
Solyc04g082220.3 Solanum lycopersicum
Solyc10g055740.2 Solanum lycopersicum
Sopen01g054030 Solanum pennellii
Sopen04g033140 Solanum pennellii
Sopen04g035850 Solanum pennellii
Sopen10g025520 Solanum pennellii
Sp1g34670 Schrenkiella parvula
Sp7g32940 Schrenkiella parvula
SpUn0276_0005 Schrenkiella parvula
TAR369G0828 Trochodendron aralioides
TAR376G0236 Trochodendron aralioides
TAR376G0913 Trochodendron aralioides
TAR381G1433 Trochodendron aralioides
TAR381G1442 Trochodendron aralioides
TAR625G1094 Trochodendron aralioides
TAR627G1183 Trochodendron aralioides
TAR628G0097 Trochodendron aralioides
TAR628G1583 Trochodendron aralioides
TAR629G2545 Trochodendron aralioides
THA.LOC104813199 Tarenaya hassleriana
THA.LOC104820180 Tarenaya hassleriana
Thecc.02G051500 Theobroma cacao
Thecc.02G051600 Theobroma cacao
Thecc.08G016000 Theobroma cacao
Thecc.08G055700 Theobroma cacao
Thecc.08G055800 Theobroma cacao
Thhalv10011394m.g Eutrema salsugineum
Thhalv10025079m.g Eutrema salsugineum
TPR.G1003 Trifolium pratense
TPR.G17175 Trifolium pratense
TPR.G17181 Trifolium pratense
TPR.G17972 Trifolium pratense
TPR.G25107 Trifolium pratense
TPR.G25127 Trifolium pratense
TPR.G29565 Trifolium pratense
TPR.G36827 Trifolium pratense
TPR.G38154 Trifolium pratense
TPR.G38160 Trifolium pratense
TWI12G0506 Tripterygium wilfordii
TWI31G1247 Tripterygium wilfordii
TWI56G0430 Tripterygium wilfordii
TWI79G0166 Tripterygium wilfordii
unitig_578.g16527 Utricularia gibba
vmacro02307 Vaccinium macrocarpon
vmacro04394 Vaccinium macrocarpon
vmacro04474 Vaccinium macrocarpon
vmacro09246 Vaccinium macrocarpon
vmacro17271 Vaccinium macrocarpon
vmacro21830 Vaccinium macrocarpon
VMungo0540G0192 Vigna mungo
VMungo1127G1848 Vigna mungo
VMungo1215G1684 Vigna mungo
VMungo1309G1117 Vigna mungo
Zm00001eb074030 Zea mays
Zm00001eb132750 Zea mays
Zm00001eb429210 Zea mays

User provided reference genes

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