Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia01227 Actinidia chinensis
Aqoxy7G01166 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EI9IQY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea
ATR0789G035 Amborella trichopoda
Atru.chr7.1942 Acer truncatum
CAN.G130.10 Capsicum annuum
Cc08_g10870 Coffea canephora
Ciclev10010468m.g Citrus clementina
CiPaw.16G027300 Carya illinoinensis
ClCG08G010040 Citrullus lanatus
COL.COLO4_21082 Corchorus olitorius
Cpa.g.sc7.157 Carica papaya
CsaV3_6G032200 Cucumis sativus L.
CSS0004361 Camellia sinensis var. sinensis
CSS0026056 Camellia sinensis var. sinensis
CSS0031213 Camellia sinensis var. sinensis
CSS0037057 Camellia sinensis var. sinensis
DCAR_003136 Daucus carota
Dinv28003 Davidia involucrata
ECA240G3049 Erigeron canadensis
FAN15G3566 Fragaria x ananassa
FAN24G3029 Fragaria x ananassa
FAN27G2967 Fragaria x ananassa
FvH4_2g31620 Fragaria vesca
Glyma.04G052400 Glycine max
Glyma.14G097100 Glycine max
Gohir.A05G040950 Gossypium hirsutum
Gohir.D05G042650 Gossypium hirsutum
Gorai.009G043700 Gossypium raimondii
Haze_18158 Corylus avellana
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla
HPP92_007654 Vanilla planifolia
HPP92_009146 Vanilla planifolia
Lalb_Chr23g0267841 Lupinus albus
Lj1g0018619 Lotus japonicus
Lj5g0025960 Lotus japonicus
Lsat_1_v5_gn_6_13921 Lactuca sativa
Manes.16G082000 Manihot esculenta
MBI04_g36906_MAGBIO Magnolia biondii
MD15G1056900 Malus domestica
Medtr1g015840 Medicago truncatula
Medtr3g104620 Medicago truncatula
MELO3C011460.2 Cucumis melo
Migut.A00115 Erythranthe guttata
Nitab4.5_0000972g0020 Nicotiana tabacum
Nitab4.5_0002039g0090 Nicotiana tabacum
Nitab4.5_0007037g0010 Nicotiana tabacum
Nitab4.5_0007177g0010 Nicotiana tabacum
Nn6g35532 Nelumbo nucifera
Oeu018628.1 Olea europaea
Oeu047101.1 Olea europaea
Peaxi162Scf00297g00062 Petunia axillaris
Peaxi162Scf01001g00001 Petunia axillaris
PGSC0003DMG400008199 Solanum tuberosum
PGSC0003DMG400029878 Solanum tuberosum
Phvul.001G037300 Phaseolus vulgaris
Phvul.009G078700 Phaseolus vulgaris
Potri.006G226200 Populus trichocarpa
Prupe.1G409500 Prunus persica
Psat5g036160 Pisum sativum
Psat6g021400 Pisum sativum
QL02p000760 Quercus lobata
RcHm_v2.0_Chr6g0311201 Rosa chinensis
Rhsim11G0042400 Rhododendron simsii
Sabra06G0174900 Salix brachista
SalBow4G1896 Salvia bowleyana
Sc06g0001000 Simmondsia chinensis
Sed0014394 Sechium edule
Sed0025262 Sechium edule
SGA_v2.0_scaffold169G38700 Striga asiatica
SGA_v2.0_scaffold20G09207 Striga asiatica
Solyc06g011440.1 Solanum lycopersicum
Solyc08g062840.1 Solanum lycopersicum
Sopen06g006480 Solanum pennellii
Sopen08g018370 Solanum pennellii
TAR626G1076 Trochodendron aralioides
THA.LOC104799160 Tarenaya hassleriana
Thecc.09G056900 Theobroma cacao
TPR.G13014 Trifolium pratense
TPR.G3528 Trifolium pratense
unitig_37.g12945 Utricularia gibba
VMungo0647G1789 Vigna mungo
VMungo1309G0458 Vigna mungo

User provided reference genes

Program Settings