Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
arahy.Tifrunner.gnm1.ann1.G33APM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6I6Z4 Arachis hypogaea
CAN.G2895.2 Capsicum annuum
CAN.G426.28 Capsicum annuum
CANSAT25G3325 Cannabis sativa
CANSAT78G1473 Cannabis sativa
Ca_00580_v3 Cicer arietinum L.
Ca_10375_v3 Cicer arietinum L.
CDE05G2550 Ceratophyllum demersum
Cfa015502 Carpinus fangiana
Ciclev10022800m.g Citrus clementina
CiPaw.01G153900 Carya illinoinensis
CiPaw.02G087100 Carya illinoinensis
CiPaw.07G100300 Carya illinoinensis
CiPaw.08G100300 Carya illinoinensis
ClCG06G005430 Citrullus lanatus
COL.COLO4_08025 Corchorus olitorius
COL.COLO4_13938 Corchorus olitorius
CsaV3_6G005680 Cucumis sativus L.
Dinv38332 Davidia involucrata
Dinv44434 Davidia involucrata
Duzib133G0397 Durio zibethinus
Duzib138G0471 Durio zibethinus
Duzib151G0788 Durio zibethinus
Duzib212G0358 Durio zibethinus
EL10Ac7g17384 Beta vulgaris
Eucgr.K03437 Eucalyptus grandis
Glyma.02G152500 Glycine max
Glyma.03G209000 Glycine max
Glyma.10G021700 Glycine max
Glyma.13G214500 Glycine max
Glyma.15G098700 Glycine max
Gohir.A08G072500 Gossypium hirsutum
Gohir.A11G118000 Gossypium hirsutum
Gohir.D08G080500 Gossypium hirsutum
Gohir.D11G122900 Gossypium hirsutum
Gorai.004G085600 Gossypium raimondii
Gorai.007G131800 Gossypium raimondii
Haze_01050 Corylus avellana
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla
Lalb_Chr02g0143101 Lupinus albus
Lalb_Chr06g0163321 Lupinus albus
Lalb_Chr15g0087071 Lupinus albus
Lalb_Chr20g0118191 Lupinus albus
Lj5g0017437 Lotus japonicus
LjContig00389g0004887 Lotus japonicus
Manes.03G190500 Manihot esculenta
Manes.05G068100 Manihot esculenta
MD11G1298300 Malus domestica
Medtr1g088970 Medicago truncatula
Medtr2g020370 Medicago truncatula
MELO3C021367.2 Cucumis melo
Migut.D00227 Erythranthe guttata
Migut.G00219 Erythranthe guttata
Migut.N00125 Erythranthe guttata
Nitab4.5_0004150g0050 Nicotiana tabacum
Oeu021618.1 Olea europaea
Os01g0937900 Oryza sativa ssp. japonica
PGSC0003DMG400024032 Solanum tuberosum
PGSC0003DMG400031864 Solanum tuberosum
Phvul.001G202300 Phaseolus vulgaris
Phvul.006G160600 Phaseolus vulgaris
Phvul.007G166400 Phaseolus vulgaris
Potri.002G207500 Populus trichocarpa
Potri.008G195700 Populus trichocarpa
Potri.010G031700 Populus trichocarpa
Potri.014G135100 Populus trichocarpa
Prupe.8G252700 Prunus persica
Psat1g187000 Pisum sativum
Psat6g167920 Pisum sativum
QL06p007247 Quercus lobata
QL12p024168 Quercus lobata
QL12p038321 Quercus lobata
Rhsim13G0017000 Rhododendron simsii
Sabra08G0148800 Salix brachista
Sabra10G0031300 Salix brachista
SalBow2G1499 Salvia bowleyana
SalBow6G6224 Salvia bowleyana
Sc19g0004910 Simmondsia chinensis
Sed0020497 Sechium edule
SGA_v2.0_scaffold11G05758 Striga asiatica
SGA_v2.0_scaffold57G20262 Striga asiatica
Solyc09g074450.1 Solanum lycopersicum
Sopen09g029300 Solanum pennellii
Thecc.01G290700 Theobroma cacao
Thecc.04G276200 Theobroma cacao
TPR.G1519 Trifolium pratense
TPR.G16944 Trifolium pratense
TWI09G0131 Tripterygium wilfordii
TWI14G1041 Tripterygium wilfordii
TWI59G1240 Tripterygium wilfordii
VMungo1383G0724 Vigna mungo

User provided reference genes

Program Settings