Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia29715 Actinidia chinensis
Actinidia33912 Actinidia chinensis
Aqoxy2G00815 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CJK2YY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDW8X7 Arachis hypogaea
Atru.chr12.71 Acer truncatum
Atru.chr12.76 Acer truncatum
CAN.G156.14 Capsicum annuum
CANSAT35G1813 Cannabis sativa
CANSAT56G2616 Cannabis sativa
CANSAT56G3657 Cannabis sativa
Ca_05987_v3 Cicer arietinum L.
Cc02_g05740 Coffea canephora
Ciclev10031427m.g Citrus clementina
CiPaw.01G301100 Carya illinoinensis
COL.COLO4_04718 Corchorus olitorius
COL.COLO4_25779 Corchorus olitorius
COL.COLO4_32758 Corchorus olitorius
Cpa.g.sc65.132 Carica papaya
Cre13.g571520 Chlamydomonas reinhardtii
CSS0001014 Camellia sinensis var. sinensis
CSS0017188 Camellia sinensis var. sinensis
DCAR_010462 Daucus carota
Dinv21764 Davidia involucrata
Duzib128G1882 Durio zibethinus
ECA238G2021 Erigeron canadensis
Eucgr.J00178 Eucalyptus grandis
FAN01G2334 Fragaria x ananassa
FAN03G1333 Fragaria x ananassa
FAN06G1368 Fragaria x ananassa
FAN10G3031 Fragaria x ananassa
FvH4_7g24970 Fragaria vesca
Glyma.02G263600 Glycine max
Gohir.A05G331600 Gossypium hirsutum
Gohir.D04G070200 Gossypium hirsutum
Gorai.012G078700 Gossypium raimondii
GSVIVG01032765001 Vitis vinifera
HanXRQChr04g0095741 Helianthus annuus
HanXRQChr14g0459391 Helianthus annuus
HanXRQChr16g0523171 Helianthus annuus
Haze_17265 Corylus avellana
Lalb_Chr04g0250441 Lupinus albus
Lj8A63T91 Lonicera japonica
LjContig00357g0015684 Lotus japonicus
Lsat_1_v5_gn_2_124440 Lactuca sativa
Manes.05G009249 Manihot esculenta
Manes.07G064632 Manihot esculenta
Manes.07G133005 Manihot esculenta
Manes.07G133012 Manihot esculenta
Manes.07G134100 Manihot esculenta
Manes.11G152042 Manihot esculenta
Manes.11G152105 Manihot esculenta
Manes.11G152127 Manihot esculenta
Manes.11G152141 Manihot esculenta
Manes.11G152170 Manihot esculenta
Manes.11G152176 Manihot esculenta
Manes.11G152184 Manihot esculenta
Manes.11G152190 Manihot esculenta
MBI15_g12399_MAGBIO Magnolia biondii
MD01G1157100 Malus domestica
MD07G1225900 Malus domestica
Medtr8g056020 Medicago truncatula
Migut.F00643 Erythranthe guttata
MSTRG.27307 Avicennia marina
Nitab4.5_0000409g0130 Nicotiana tabacum
Nitab4.5_0001222g0010 Nicotiana tabacum
Nn2g10961 Nelumbo nucifera
Oeu059718.1 Olea europaea
Os01g0829100 Oryza sativa ssp. japonica
Peaxi162Scf00304g00013 Petunia axillaris
PGR044G1292 Punica granatum
PGSC0003DMG400027722 Solanum tuberosum
Phvul.006G152901 Phaseolus vulgaris
Phvul.007G218000 Phaseolus vulgaris
Phvul.008G221600 Phaseolus vulgaris
Potri.010G185200 Populus trichocarpa
Prupe.2G254900 Prunus persica
Psat2g031520 Pisum sativum
QL08p063638 Quercus lobata
RcHm_v2.0_Chr1g0370871 Rosa chinensis
Rhsim03G0146000 Rhododendron simsii
Sabra10G0142400 Salix brachista
SalBow3G1672 Salvia bowleyana
SEGI_12817 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16663 Striga asiatica
Solyc03g095860.3 Solanum lycopersicum
Sopen03g025840 Solanum pennellii
TAR633G2105 Trochodendron aralioides
Thecc.10G011700 Theobroma cacao
TPR.G38411 Trifolium pratense
TWI73G0671 Tripterygium wilfordii
vmacro06952 Vaccinium macrocarpon
vmacro17693 Vaccinium macrocarpon
VMungo0647G1650 Vigna mungo
Zm00001eb368510 Zea mays

User provided reference genes

Program Settings