Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.14g081870 Amaranthus hybridus
Aqoxy7G01699 Aquilegia oxysepala
ATR0559G294 Amborella trichopoda
Atru.chr1.3276 Acer truncatum
Atru.chr7.1339 Acer truncatum
AUR62011005 Chenopodium quinoa
AUR62016446 Chenopodium quinoa
AUR62021516 Chenopodium quinoa
Ca_25525_v3 Cicer arietinum L.
Cfa003264 Carpinus fangiana
Ciclev10010038m.g Citrus clementina
CiPaw.01G239000 Carya illinoinensis
COL.COLO4_34908 Corchorus olitorius
Cpa.g.sc451.1 Carica papaya
CsaV3_1G030560 Cucumis sativus L.
CSS0012617 Camellia sinensis var. sinensis
DCAR_023052 Daucus carota
DCAR_028717 Daucus carota
Dinv38045 Davidia involucrata
ECA232G3029 Erigeron canadensis
EL10Ac8g18507 Beta vulgaris
Eucgr.C01049 Eucalyptus grandis
Eucgr.C03849 Eucalyptus grandis
Eucgr.F03018 Eucalyptus grandis
FAN23G1574 Fragaria x ananassa
FAN26G1953 Fragaria x ananassa
FAN26G2876 Fragaria x ananassa
FAN28G0995 Fragaria x ananassa
FvH4_1g05030 Fragaria vesca
Glyma.07G087100 Glycine max
Glyma.09G189800 Glycine max
Gohir.A06G061700 Gossypium hirsutum
Gohir.A07G006801 Gossypium hirsutum
Gohir.A08G241000 Gossypium hirsutum
Gohir.D06G060000 Gossypium hirsutum
Gohir.D07G005100 Gossypium hirsutum
Gohir.D08G261700 Gossypium hirsutum
Gorai.001G004700 Gossypium raimondii
Gorai.004G279800 Gossypium raimondii
Gorai.010G069800 Gossypium raimondii
HanXRQChr10g0317871 Helianthus annuus
Haze_25706 Corylus avellana
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla
Lalb_Chr05g0222821 Lupinus albus
Lalb_Chr22g0352851 Lupinus albus
Lj2g0010717 Lotus japonicus
Lj4g0003308 Lotus japonicus
Lsat_1_v5_gn_4_103641 Lactuca sativa
Lsat_1_v5_gn_5_101501 Lactuca sativa
Manes.03G019500 Manihot esculenta
Manes.16G116800 Manihot esculenta
Medtr6g086445 Medicago truncatula
Medtr8g083460 Medicago truncatula
Migut.D01028 Erythranthe guttata
Migut.I00869 Erythranthe guttata
Nitab4.5_0000351g0200 Nicotiana tabacum
Nitab4.5_0003351g0110 Nicotiana tabacum
Nitab4.5_0005851g0050 Nicotiana tabacum
Nn2g11764 Nelumbo nucifera
Nn8g39210 Nelumbo nucifera
Peaxi162Scf00015g00416 Petunia axillaris
Peaxi162Scf00207g00095 Petunia axillaris
Peaxi162Scf00560g00120 Petunia axillaris
PGSC0003DMG400005604 Solanum tuberosum
PGSC0003DMG400005605 Solanum tuberosum
PGSC0003DMG400016536 Solanum tuberosum
Phvul.004G162600 Phaseolus vulgaris
Potri.006G159300 Populus trichocarpa
Potri.018G078900 Populus trichocarpa
Prupe.7G229700 Prunus persica
Psat1g041120 Pisum sativum
QL02p085521 Quercus lobata
QL05p023464 Quercus lobata
QL10p054851 Quercus lobata
RcHm_v2.0_Chr2g0090641 Rosa chinensis
Rhsim08G0221700 Rhododendron simsii
Sabra18G0066900 Salix brachista
Sc18g0001160 Simmondsia chinensis
Sed0016972 Sechium edule
Sed0019634 Sechium edule
Sed0020512 Sechium edule
SGA_v2.0_scaffold5G02584 Striga asiatica
Solyc03g120155.1 Solanum lycopersicum
Solyc03g120160.1 Solanum lycopersicum
Solyc06g066700.1 Solanum lycopersicum
Sopen03g039030 Solanum pennellii
Sopen03g039040 Solanum pennellii
Sopen06g024990 Solanum pennellii
TAR383G0714 Trochodendron aralioides
TAR624G1182 Trochodendron aralioides
TAR626G0143 Trochodendron aralioides
Thecc.09G111700 Theobroma cacao
TPR.G35275 Trifolium pratense
unitig_899.g14776 Utricularia gibba
vmacro18908 Vaccinium macrocarpon
VMungo0464G1934 Vigna mungo

User provided reference genes

Program Settings