Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p03960 Brassica napus
Aa31LG10G4570 Aethionema arabicum
Ah.01g019750 Amaranthus hybridus
AL1G56570 Arabidopsis lyrata
AT1G49410 Arabidopsis thaliana
Atru.chr12.1346 Acer truncatum
AUR62037762 Chenopodium quinoa
AUR62038779 Chenopodium quinoa
BcaB02g11073 Brassica carinata
BcaB04g17343 Brassica carinata
BcaC06g34885 Brassica carinata
C05p34630 Brassica napus
CAN.G322.99 Capsicum annuum
CANSAT25G1814 Cannabis sativa
CARHR039420 Cardamine hirsuta
Carub.0001s3861 Capsella rubella
Ca_07356_v3 Cicer arietinum L.
Cfa004963 Carpinus fangiana
Ciclev10029767m.g Citrus clementina
CiPaw.05G059500 Carya illinoinensis
ClCG09G017780 Citrullus lanatus
COL.COLO4_17788 Corchorus olitorius
Cpa.g.sc62.91 Carica papaya
CsaV3_2G014370 Cucumis sativus L.
CSS0032371 Camellia sinensis var. sinensis
CSS0038117 Camellia sinensis var. sinensis
DCAR_022083 Daucus carota
Duzib132G1115 Durio zibethinus
Duzib248G0323 Durio zibethinus
Duzib248G0595 Durio zibethinus
Duzib248G1495 Durio zibethinus
ECA240G4508 Erigeron canadensis
FAN20G1774 Fragaria x ananassa
Glyma.11G122300 Glycine max
Glyma.12G047200 Glycine max
Glyma.12G082000 Glycine max
Glyma.16G059100 Glycine max
Gohir.A04G129200 Gossypium hirsutum
Gohir.A04G129300 Gossypium hirsutum
Gohir.D04G174300 Gossypium hirsutum
Gohir.D04G174400 Gossypium hirsutum
Gorai.004G104500 Gossypium raimondii
Gorai.012G163800 Gossypium raimondii
Gorai.012G163900 Gossypium raimondii
Haze_02438 Corylus avellana
Hma1.2p1_0584F.1_g183350 Hydrangea macrophylla
Hma1.2p1_1353F.1_g277670 Hydrangea macrophylla
Hma1.2p1_2724F.1_g327525 Hydrangea macrophylla
Lalb_Chr01g0002891 Lupinus albus
Lalb_Chr03g0025901 Lupinus albus
Lj3g0015904 Lotus japonicus
Lj5E203T0 Lonicera japonica
Lsat_1_v5_gn_9_109200 Lactuca sativa
Manes.15G146500 Manihot esculenta
Manes.17G097600 Manihot esculenta
Mapoly0014s0113 Marchantia polymorpha
MD00G1073700 Malus domestica
MD10G1085000 Malus domestica
MD11G1171200 Malus domestica
Medtr4g068710 Medicago truncatula
MELO3C021943.2 Cucumis melo
Migut.B00282 Erythranthe guttata
Nitab4.5_0003281g0040 Nicotiana tabacum
Nitab4.5_0003816g0110 Nicotiana tabacum
Nn5g29444 Nelumbo nucifera
Nn5g29445 Nelumbo nucifera
Nn6g32178 Nelumbo nucifera
Oeu007232.1 Olea europaea
Os03g0626200 Oryza sativa ssp. japonica
Peaxi162Scf00016g01124 Petunia axillaris
PGR042G2915 Punica granatum
PGSC0003DMG400025161 Solanum tuberosum
Phvul.011G049200 Phaseolus vulgaris
Potri.004G149200 Populus trichocarpa
Potri.009G110100 Populus trichocarpa
Pp3c5_22850 Physcomitrium patens
Pp3c6_6800 Physcomitrium patens
Prupe.8G107900 Prunus persica
Psat7g206800 Pisum sativum
RcHm_v2.0_Chr6g0262021 Rosa chinensis
Sabra04G0099200 Salix brachista
Sabra09G0084100 Salix brachista
Sed0019655 Sechium edule
Sed0020423 Sechium edule
SHI05446 Sapria himalayana
Solyc01g109220.4 Solanum lycopersicum
TAR381G0702 Trochodendron aralioides
THA.LOC104798806 Tarenaya hassleriana
THA.LOC104808449 Tarenaya hassleriana
Thecc.02G030000 Theobroma cacao
Thecc.08G131300 Theobroma cacao
Thhalv10011932m.g Eutrema salsugineum
TWI31G0092 Tripterygium wilfordii
unitig_21.g20769 Utricularia gibba
vmacro19447 Vaccinium macrocarpon
vmacro23386 Vaccinium macrocarpon
VMungo1127G0479 Vigna mungo

User provided reference genes

Program Settings