Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia19335 Actinidia chinensis
Actinidia33084 Actinidia chinensis
Ah.16g105880 Amaranthus hybridus
Aqoxy3G02849 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A5PTB1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A9F7WL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DXWU26 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1J4V4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4P8DW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VU2AWH Arachis hypogaea
ATR1152G048 Amborella trichopoda
Atru.chr9.2516 Acer truncatum
CAN.G1166.19 Capsicum annuum
CANSAT80G2749 Cannabis sativa
Ca_21937_v3 Cicer arietinum L.
Cc04_g12300 Coffea canephora
CDE05G1299 Ceratophyllum demersum
Cfa019165 Carpinus fangiana
Ciclev10024596m.g Citrus clementina
CiPaw.11G023600 Carya illinoinensis
ClCG01G013280 Citrullus lanatus
COL.COLO4_30097 Corchorus olitorius
Cpa.g.sc153.3 Carica papaya
CsaV3_1G008640 Cucumis sativus L.
CSS0018601 Camellia sinensis var. sinensis
DCAR_016475 Daucus carota
Dinv38564 Davidia involucrata
Duzib205G0427 Durio zibethinus
EL10Ac5g10716 Beta vulgaris
Eucgr.K02824 Eucalyptus grandis
FAN04G0457 Fragaria x ananassa
FAN08G2091 Fragaria x ananassa
FAN13G1429 Fragaria x ananassa
FAN18G2238 Fragaria x ananassa
FAN18G4153 Fragaria x ananassa
FvH4_5g05610 Fragaria vesca
Glyma.04G185400 Glycine max
Glyma.05G039100 Glycine max
Glyma.17G087700 Glycine max
Gohir.A03G090200 Gossypium hirsutum
Gohir.D02G117800 Gossypium hirsutum
Gorai.005G135700 Gossypium raimondii
GSVIVG01007707001 Vitis vinifera
Haze_07540 Corylus avellana
Hma1.2p1_0592F.1_g185540 Hydrangea macrophylla
HPP92_003441 Vanilla planifolia
Lalb_Chr12g0201691 Lupinus albus
Lj4g0004851 Lotus japonicus
Lj5P126T52 Lonicera japonica
Lsat_1_v5_gn_4_75740 Lactuca sativa
Manes.06G106900 Manihot esculenta
MBI16_g14592_MAGBIO Magnolia biondii
MD06G1171800 Malus domestica
Medtr4g105520 Medicago truncatula
MELO3C002280.2 Cucumis melo
Migut.O00121 Erythranthe guttata
MSTRG.11473 Avicennia marina
Nitab4.5_0001207g0080 Nicotiana tabacum
Nitab4.5_0003229g0060 Nicotiana tabacum
Nn4g22695 Nelumbo nucifera
Oeu036007.1 Olea europaea
Os05g0170300 Oryza sativa ssp. japonica
Peaxi162Scf00089g00175 Petunia axillaris
PGR044G1443 Punica granatum
PGSC0003DMG400018163 Solanum tuberosum
Phvul.003G202100 Phaseolus vulgaris
Phvul.009G176400 Phaseolus vulgaris
Potri.012G088900 Populus trichocarpa
Prupe.5G170700 Prunus persica
Psat4g058560 Pisum sativum
PSO591G0140 Papaver somniferum
QL10p010870 Quercus lobata
RcHm_v2.0_Chr7g0193201 Rosa chinensis
Rhsim08G0174500 Rhododendron simsii
Sabra12G0064000 Salix brachista
SalBow5G4666 Salvia bowleyana
Sc12g0005220 Simmondsia chinensis
Sed0025689 Sechium edule
SEGI_11765 Sequoiadendron giganteum
SEGI_17881 Sequoiadendron giganteum
SGA_v2.0_scaffold228G43267 Striga asiatica
SGA_v2.0_scaffold25G10827 Striga asiatica
SGA_v2.0_scaffold90G27887 Striga asiatica
Solyc03g112680.3 Solanum lycopersicum
Sopen03g031760 Solanum pennellii
TAR622G1112 Trochodendron aralioides
TAR622G1378 Trochodendron aralioides
TAR629G1736 Trochodendron aralioides
Thecc.03G016900 Theobroma cacao
Thecc.03G017300 Theobroma cacao
Thecc.03G018200 Theobroma cacao
Thecc.03G018500 Theobroma cacao
TPR.G24512 Trifolium pratense
TPR.G37464 Trifolium pratense
TWI39G0990 Tripterygium wilfordii
VMungo1215G1669 Vigna mungo
VMungo1309G1240 Vigna mungo
Zm00001eb283380 Zea mays

User provided reference genes

Program Settings