Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11790 Brassica napus
Aa31LG6G9350 Aethionema arabicum
Aa31LG6G9370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis
AL1G52300 Arabidopsis lyrata
Aqoxy6G00171 Aquilegia oxysepala
Aqoxy6G00222 Aquilegia oxysepala
Aqoxy6G00227 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea
AT1G44414 Arabidopsis thaliana
ATR0584G060 Amborella trichopoda
Atru.chr13.1488 Acer truncatum
BcaB07g33949 Brassica carinata
BcaC08g42847 Brassica carinata
BolC6t35199H Brassica oleracea
C06p00630 Brassica napus
CAN.G1040.1 Capsicum annuum
CAN.G1040.3 Capsicum annuum
CANSAT11G2348 Cannabis sativa
CARHR035920 Cardamine hirsuta
Carub.0001s3518 Capsella rubella
Cc10_g11990 Coffea canephora
CDE06G0523 Ceratophyllum demersum
Ciclev10002916m.g Citrus clementina
CiPaw.05G221000 Carya illinoinensis
ClCG08G005690 Citrullus lanatus
Cpa.g.sc64.90 Carica papaya
CsaV3_6G034440 Cucumis sativus L.
CSS0038396 Camellia sinensis var. sinensis
DCAR_016167 Daucus carota
Dinv07214 Davidia involucrata
Duzib116G0545 Durio zibethinus
ECA233G1368 Erigeron canadensis
FAN15G1067 Fragaria x ananassa
Glyma.14G150500 Glycine max
Gohir.A06G045000 Gossypium hirsutum
Gohir.D06G045500 Gossypium hirsutum
Gorai.010G050500 Gossypium raimondii
HanXRQChr15g0465231 Helianthus annuus
Haze_00435 Corylus avellana
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla
HPP92_006841 Vanilla planifolia
Lalb_Chr17g0343701 Lupinus albus
Lj1g0018777 Lotus japonicus
Lj4P628T29 Lonicera japonica
Manes.02G163800 Manihot esculenta
Manes.18G077606 Manihot esculenta
Mapoly0085s0071 Marchantia polymorpha
MD15G1347500 Malus domestica
Medtr1g029990 Medicago truncatula
MELO3C010615.2 Cucumis melo
Migut.N03282 Erythranthe guttata
MSTRG.22408 Avicennia marina
Nitab4.5_0003719g0010 Nicotiana tabacum
Nitab4.5_0011334g0030 Nicotiana tabacum
Nn1g00264 Nelumbo nucifera
Nn1g02485 Nelumbo nucifera
Nn1g08790 Nelumbo nucifera
Nn3g18690 Nelumbo nucifera
Nn4g24512 Nelumbo nucifera
Nn5g28305 Nelumbo nucifera
Oeu028565.1 Olea europaea
Os05g0435400 Oryza sativa ssp. japonica
Peaxi162Scf00051g00105 Petunia axillaris
PGR042G2864 Punica granatum
PGSC0003DMG400041136 Solanum tuberosum
Phvul.008G160900 Phaseolus vulgaris
Phvul.008G167875 Phaseolus vulgaris
Phvul.L001669 Phaseolus vulgaris
Potri.002G083100 Populus trichocarpa
Pp3c19_19360 Physcomitrium patens
Prupe.1G495300 Prunus persica
Psat4g211320 Pisum sativum
Psat6g041680 Pisum sativum
PSO170G1805 Papaver somniferum
PSO528G0093 Papaver somniferum
QL09p034466 Quercus lobata
RcHm_v2.0_Chr6g0295891 Rosa chinensis
RhsimUnG0092400 Rhododendron simsii
SalBow6G5334 Salvia bowleyana
Sc22g0004000 Simmondsia chinensis
Sed0002225 Sechium edule
SGA_v2.0_scaffold28G11996 Striga asiatica
SHI08583 Sapria himalayana
SMO143G0209 Selaginella moellendorffii
Solyc06g060300.1 Solanum lycopersicum
Sopen06g020420 Solanum pennellii
Sp1g33530 Schrenkiella parvula
TAR381G0802 Trochodendron aralioides
THA.LOC104817375 Tarenaya hassleriana
Thecc.08G126100 Theobroma cacao
Thhalv10012348m.g Eutrema salsugineum
TPR.G25776 Trifolium pratense
TWI34G1919 Tripterygium wilfordii
vmacro00836 Vaccinium macrocarpon
VMungo0647G1492 Vigna mungo
Zm00001eb348620 Zea mays

User provided reference genes

Program Settings