Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia10365 Actinidia chinensis
Actinidia30808 Actinidia chinensis
Aqoxy6G01467 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.15IZES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MEQI9D Arachis hypogaea
ATR0022G018 Amborella trichopoda
Atru.chr13.1051 Acer truncatum
CANSAT25G2895 Cannabis sativa
Cc10_g15550 Coffea canephora
Ciclev10002010m.g Citrus clementina
CiPaw.07G168400 Carya illinoinensis
CiPaw.08G053900 Carya illinoinensis
ClCG08G011490 Citrullus lanatus
COL.COLO4_35193 Corchorus olitorius
Cpa.g.sc608.1 Carica papaya
CsaV3_2G030080 Cucumis sativus L.
CSS0010517 Camellia sinensis var. sinensis
Dinv44835 Davidia involucrata
Duzib041G0196 Durio zibethinus
Duzib093G2023 Durio zibethinus
Duzib116G0880 Durio zibethinus
ECA247G1746 Erigeron canadensis
EL10Ac1g01102 Beta vulgaris
Eucgr.F00405 Eucalyptus grandis
Eucgr.F02125 Eucalyptus grandis
FAN04G3208 Fragaria x ananassa
FAN08G0887 Fragaria x ananassa
FAN18G2443 Fragaria x ananassa
FvH4_5g35850 Fragaria vesca
Glyma.02G212100 Glycine max
Glyma.14G179800 Glycine max
Gohir.A02G077300 Gossypium hirsutum
Gohir.A05G221500 Gossypium hirsutum
Gohir.D02G084600 Gossypium hirsutum
Gohir.D05G224200 Gossypium hirsutum
Gorai.005G095300 Gossypium raimondii
Gorai.009G231700 Gossypium raimondii
HanXRQChr04g0108601 Helianthus annuus
Haze_22347 Corylus avellana
Hma1.2p1_0620F.1_g190555 Hydrangea macrophylla
HPP92_002220 Vanilla planifolia
HPP92_016372 Vanilla planifolia
Hund27003 Selenicereus undatus
Lalb_Chr04g0253001 Lupinus albus
Lalb_Chr10g0102661 Lupinus albus
Lalb_Chr17g0344401 Lupinus albus
LjContig00408g0001347 Lotus japonicus
Lsat_1_v5_gn_1_2280 Lactuca sativa
Manes.02G147100 Manihot esculenta
Manes.18G061400 Manihot esculenta
MBI06_g18795_MAGBIO Magnolia biondii
MD08G1192700 Malus domestica
MD15G1381100 Malus domestica
Medtr5g065350 Medicago truncatula
MELO3C011066.2 Cucumis melo
Migut.N00361 Erythranthe guttata
MSTRG.24626 Avicennia marina
Nitab4.5_0001507g0070 Nicotiana tabacum
Nitab4.5_0006922g0010 Nicotiana tabacum
Nn1g05500 Nelumbo nucifera
Nn5g29944 Nelumbo nucifera
Oeu043942.1 Olea europaea
Os02g0568600 Oryza sativa ssp. japonica
Os03g0187400 Oryza sativa ssp. japonica
Os04g0450000 Oryza sativa ssp. japonica
Peaxi162Scf00281g00079 Petunia axillaris
PGR031G3996 Punica granatum
PGR042G1402 Punica granatum
Phvul.008G179400 Phaseolus vulgaris
Potri.005G158400 Populus trichocarpa
Prupe.1G527300 Prunus persica
Psat0s2495g0040 Pisum sativum
PSO541G0756 Papaver somniferum
PSO675G7602 Papaver somniferum
QL09p017111 Quercus lobata
RcHm_v2.0_Chr7g0237581 Rosa chinensis
Sabra05G0120900 Salix brachista
SalBow3G1297 Salvia bowleyana
Sc23g0000570 Simmondsia chinensis
Sc26g0000220 Simmondsia chinensis
Sed0009750 Sechium edule
Sed0013944 Sechium edule
SEGI_40577 Sequoiadendron giganteum
Solyc04g076010.3 Solanum lycopersicum
TAR376G0287 Trochodendron aralioides
TAR625G1503 Trochodendron aralioides
TAR628G0666 Trochodendron aralioides
Thecc.08G067500 Theobroma cacao
TPR.G20891 Trifolium pratense
TWI12G1315 Tripterygium wilfordii
TWI56G0426 Tripterygium wilfordii
vmacro21310 Vaccinium macrocarpon
VMungo0647G2546 Vigna mungo
Zm00001eb006590 Zea mays
Zm00001eb081390 Zea mays
Zm00001eb244610 Zea mays
Zm00001eb244620 Zea mays
Zm00001eb401520 Zea mays

User provided reference genes

Program Settings