Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18560 Brassica napus
Aa31LG5G10140 Aethionema arabicum
Actinidia39409 Actinidia chinensis
Ah.04g165410 Amaranthus hybridus
AL7G25420 Arabidopsis lyrata
Aqoxy1G02746 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea
AT4G27380 Arabidopsis thaliana
ATR0693G417 Amborella trichopoda
Atru.chr2.2863 Acer truncatum
AUR62015600 Chenopodium quinoa
BcaC06g32697 Brassica carinata
BcaNung03032 Brassica carinata
BcaNung07200 Brassica carinata
BolC1t02296H Brassica oleracea
BraA01t01804Z Brassica rapa
C01p23510 Brassica napus
CANSAT11G1965 Cannabis sativa
CARHR235050 Cardamine hirsuta
Carub.0007s1349 Capsella rubella
Cc05_g12690 Coffea canephora
CDE05G0149 Ceratophyllum demersum
CDE05G3101 Ceratophyllum demersum
Ciclev10010014m.g Citrus clementina
CiPaw.11G176600 Carya illinoinensis
ClCG10G006500 Citrullus lanatus
COL.COLO4_09480 Corchorus olitorius
Cpa.g.sc389.3 Carica papaya
CsaV3_3G005960 Cucumis sativus L.
DCAR_009984 Daucus carota
DCAR_022487 Daucus carota
Dinv08341 Davidia involucrata
Duzib213G0757 Durio zibethinus
ECA246G4377 Erigeron canadensis
EL10Ac4g08058 Beta vulgaris
Eucgr.F01078 Eucalyptus grandis
FAN11G3987 Fragaria x ananassa
FAN21G0859 Fragaria x ananassa
FAN25G3649 Fragaria x ananassa
FvH4_3g21000 Fragaria vesca
Glyma.12G219500 Glycine max
Glyma.13G281800 Glycine max
Gohir.A01G068600 Gossypium hirsutum
Gohir.D01G055900 Gossypium hirsutum
Gorai.002G076000 Gossypium raimondii
GSVIVG01014434001 Vitis vinifera
GSVIVG01014436001 Vitis vinifera
HanXRQChr05g0151621 Helianthus annuus
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla
Hund23375 Selenicereus undatus
Lalb_Chr25g0286741 Lupinus albus
Lj3g0013461 Lotus japonicus
Lsat_1_v5_gn_5_6820 Lactuca sativa
Manes.15G083200 Manihot esculenta
MD11G1237100 Malus domestica
Medtr2g080990 Medicago truncatula
MELO3C016554.2 Cucumis melo
Migut.M01859 Erythranthe guttata
MSTRG.15205 Avicennia marina
Nitab4.5_0000297g0110 Nicotiana tabacum
Nitab4.5_0008686g0030 Nicotiana tabacum
Nn1g03914 Nelumbo nucifera
Oeu030434.1 Olea europaea
Os07g0562900 Oryza sativa ssp. japonica
Peaxi162Scf01216g00052 Petunia axillaris
PGR083G0896 Punica granatum
PGSC0003DMG400015988 Solanum tuberosum
PGSC0003DMG401019249 Solanum tuberosum
Phvul.005G086000 Phaseolus vulgaris
Potri.001G406900 Populus trichocarpa
Prupe.4G190300 Prunus persica
Psat5g246560 Pisum sativum
PSO478G5222 Papaver somniferum
PSO541G1909 Papaver somniferum
PSO675G4296 Papaver somniferum
RcHm_v2.0_Chr5g0035981 Rosa chinensis
Rhsim06G0192900 Rhododendron simsii
Sabra16G0268300 Salix brachista
Sabra16G0270600 Salix brachista
Sc16g0006770 Simmondsia chinensis
Sed0025258 Sechium edule
SGA_v2.0_scaffold73G24317 Striga asiatica
Solyc07g063575.1 Solanum lycopersicum
Solyc10g047330.1 Solanum lycopersicum
Sopen07g031760 Solanum pennellii
Sp7g25310 Schrenkiella parvula
TAR371G0602 Trochodendron aralioides
TAR627G0519 Trochodendron aralioides
THA.LOC104811846 Tarenaya hassleriana
Thecc.07G071100 Theobroma cacao
Thhalv10026547m.g Eutrema salsugineum
TPR.G32847 Trifolium pratense
TWI38G1712 Tripterygium wilfordii
TWI39G1107 Tripterygium wilfordii
unitig_0.g2051 Utricularia gibba
vmacro11813 Vaccinium macrocarpon
VMungo0647G1906 Vigna mungo
Zm00001eb106900 Zea mays

User provided reference genes

Program Settings