Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia10409 Actinidia chinensis
Actinidia18379 Actinidia chinensis
Ah.04g149900 Amaranthus hybridus
Aqoxy2G00670 Aquilegia oxysepala
ATR0068G026 Amborella trichopoda
Atru.chr8.931 Acer truncatum
AUR62018475 Chenopodium quinoa
AUR62020949 Chenopodium quinoa
CAN.G128.129 Capsicum annuum
CANSAT78G1013 Cannabis sativa
Ca_08339_v3 Cicer arietinum L.
CDE04G0982 Ceratophyllum demersum
Cfa019892 Carpinus fangiana
Ciclev10013885m.g Citrus clementina
CiPaw.09G161100 Carya illinoinensis
ClCG10G016860 Citrullus lanatus
COL.COLO4_05647 Corchorus olitorius
Cpa.g.sc33.185 Carica papaya
CsaV3_3G039500 Cucumis sativus L.
DCAR_009109 Daucus carota
DCAR_016891 Daucus carota
Dinv37052 Davidia involucrata
Duzib177G0099 Durio zibethinus
Eucgr.A02170 Eucalyptus grandis
FAN07G2764 Fragaria x ananassa
FAN12G0994 Fragaria x ananassa
FAN12G2197 Fragaria x ananassa
FAN17G1891 Fragaria x ananassa
FAN22G1656 Fragaria x ananassa
FvH4_4g10470 Fragaria vesca
Glyma.03G118900 Glycine max
Glyma.19G123300 Glycine max
Gohir.A05G393000 Gossypium hirsutum
Gohir.A13G114700 Gossypium hirsutum
Gohir.D04G022850 Gossypium hirsutum
Gohir.D13G117500 Gossypium hirsutum
Gorai.012G026500 Gossypium raimondii
Gorai.013G132100 Gossypium raimondii
GSVIVG01029894001 Vitis vinifera
Haze_01737 Corylus avellana
Haze_20355 Corylus avellana
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla
HPP92_021156 Vanilla planifolia
Lalb_Chr22g0358291 Lupinus albus
Lj1g0025432 Lotus japonicus
Lj2A414T29 Lonicera japonica
Manes.04G066400 Manihot esculenta
MBI14_g08053_MAGBIO Magnolia biondii
MBI15_g01650_MAGBIO Magnolia biondii
MD12G1110900 Malus domestica
Medtr7g088200 Medicago truncatula
MELO3C009692.2 Cucumis melo
Migut.J01597 Erythranthe guttata
Migut.K00204 Erythranthe guttata
MSTRG.19744 Avicennia marina
MSTRG.6258 Avicennia marina
Nitab4.5_0000613g0170 Nicotiana tabacum
Nitab4.5_0000811g0050 Nicotiana tabacum
Oeu020265.1 Olea europaea
Os01g0264600 Oryza sativa ssp. japonica
Peaxi162Scf00575g00079 Petunia axillaris
PGR042G3351 Punica granatum
PGR042G3883 Punica granatum
PGR142G0684 Punica granatum
PGSC0003DMG400028120 Solanum tuberosum
Phvul.001G109100 Phaseolus vulgaris
Potri.005G090000 Populus trichocarpa
Potri.007G074056 Populus trichocarpa
Prupe.7G023100 Prunus persica
Psat3g083040 Pisum sativum
PSO339G6289 Papaver somniferum
PSO384G3070 Papaver somniferum
PSO675G2416 Papaver somniferum
PSO732G0159 Papaver somniferum
QL02p091854 Quercus lobata
RcHm_v2.0_Chr3g0495011 Rosa chinensis
RhsimUnG0021900 Rhododendron simsii
Sabra05G0074100 Salix brachista
Sabra07G0062300 Salix brachista
SalBow6G1989 Salvia bowleyana
SalBow6G6384 Salvia bowleyana
Sc13g0000670 Simmondsia chinensis
Sc19g0007720 Simmondsia chinensis
Sed0023829 Sechium edule
Sed0024594 Sechium edule
SEGI_17426 Sequoiadendron giganteum
SGA_v2.0_scaffold139G35361 Striga asiatica
SGA_v2.0_scaffold66G22349 Striga asiatica
SGA_v2.0_scaffold69G23211 Striga asiatica
Solyc10g081340.1 Solanum lycopersicum
Sopen10g031840 Solanum pennellii
TAR561G0001 Trochodendron aralioides
Thecc.05G190500 Theobroma cacao
TPR.G23681 Trifolium pratense
TWI74G0078 Tripterygium wilfordii
TWI77G0394 Tripterygium wilfordii
unitig_899.g15656 Utricularia gibba
VMungo1383G3023 Vigna mungo
Zm00001eb333260 Zea mays

User provided reference genes

Program Settings