Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia08162 Actinidia chinensis
Aqoxy3G02932 Aquilegia oxysepala
Atru.chr11.2043 Acer truncatum
CAN.G126.6 Capsicum annuum
CANSAT01G1746 Cannabis sativa
Cfa009155 Carpinus fangiana
Ciclev10032958m.g Citrus clementina
CiPaw.05G151900 Carya illinoinensis
CiPaw.06G071200 Carya illinoinensis
ClCG05G025370 Citrullus lanatus
COL.COLO4_24179 Corchorus olitorius
CSS0017958 Camellia sinensis var. sinensis
CSS0045389 Camellia sinensis var. sinensis
DCAR_007085 Daucus carota
DCAR_026537 Daucus carota
Duzib248G0521 Durio zibethinus
Duzib268G0018 Durio zibethinus
ECA233G1669 Erigeron canadensis
ECA234G1002 Erigeron canadensis
Eucgr.B03316 Eucalyptus grandis
FAN07G0793 Fragaria x ananassa
FAN12G2944 Fragaria x ananassa
FAN17G0543 Fragaria x ananassa
FAN22G1900 Fragaria x ananassa
FvH4_4g34300 Fragaria vesca
Glyma.01G030000 Glycine max
Glyma.02G035400 Glycine max
Glyma.08G286300 Glycine max
Gohir.A03G139000 Gossypium hirsutum
Gohir.A04G135600 Gossypium hirsutum
Gohir.A12G143200 Gossypium hirsutum
Gohir.D02G161900 Gossypium hirsutum
Gohir.D04G178700 Gossypium hirsutum
Gohir.D12G147900 Gossypium hirsutum
Gorai.005G181900 Gossypium raimondii
Gorai.008G159200 Gossypium raimondii
Gorai.012G171800 Gossypium raimondii
GSVIVG01013748001 Vitis vinifera
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla
Lalb_Chr05g0216831 Lupinus albus
Lalb_Chr09g0334981 Lupinus albus
Lalb_Chr16g0382221 Lupinus albus
Lj2g0015975 Lotus japonicus
Lj4g0018280 Lotus japonicus
Lsat_1_v5_gn_4_5541 Lactuca sativa
Lsat_1_v5_gn_8_155581 Lactuca sativa
Manes.12G027900 Manihot esculenta
Manes.13G029400 Manihot esculenta
MBI16_g27096_MAGBIO Magnolia biondii
MD13G1093000 Malus domestica
MD16G1094000 Malus domestica
Medtr5g034200 Medicago truncatula
Medtr8g064760 Medicago truncatula
MELO3C011993.2 Cucumis melo
Migut.E00166 Erythranthe guttata
Migut.L01422 Erythranthe guttata
MSTRG.2398 Avicennia marina
MSTRG.591 Avicennia marina
MSTRG.7902 Avicennia marina
Nitab4.5_0000034g0280 Nicotiana tabacum
Nitab4.5_0004636g0010 Nicotiana tabacum
Nn3g16851 Nelumbo nucifera
Nn4g22760 Nelumbo nucifera
Oeu054057.1 Olea europaea
Oeu056732.1 Olea europaea
PGR102G1011 Punica granatum
PGSC0003DMG400027920 Solanum tuberosum
Phvul.002G070800 Phaseolus vulgaris
Phvul.003G060900 Phaseolus vulgaris
Potri.010G041600 Populus trichocarpa
Prupe.1G252500 Prunus persica
Psat2g104560 Pisum sativum
Psat4g124320 Pisum sativum
QL03p060106 Quercus lobata
RcHm_v2.0_Chr4g0443731 Rosa chinensis
Rhsim12G0044500 Rhododendron simsii
Sabra10G0025800 Salix brachista
SalBow2G1747 Salvia bowleyana
SalBow8G4409 Salvia bowleyana
Sc11g0001140 Simmondsia chinensis
Sed0009378 Sechium edule
Sed0023819 Sechium edule
SGA_v2.0_scaffold165G38235 Striga asiatica
SGA_v2.0_scaffold8G04208 Striga asiatica
Solyc04g026250.1 Solanum lycopersicum
Sopen04g014760 Solanum pennellii
TAR374G1667 Trochodendron aralioides
Thecc.02G251400 Theobroma cacao
TPR.G11688 Trifolium pratense
TPR.G11726 Trifolium pratense
TPR.G21100 Trifolium pratense
TWI18G1040 Tripterygium wilfordii
unitig_22.g5534 Utricularia gibba
unitig_22.g6434 Utricularia gibba
unitig_26.g10360 Utricularia gibba
unitig_8.g3152 Utricularia gibba
unitig_8.g3942 Utricularia gibba
VMungo0251G2708 Vigna mungo
VMungo1215G0509 Vigna mungo

User provided reference genes

Program Settings