Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06360 Brassica napus
Aa31LG1G5330 Aethionema arabicum
Actinidia06485 Actinidia chinensis
AL1G20230 Arabidopsis lyrata
Aqoxy3G04069 Aquilegia oxysepala
AT1G09680 Arabidopsis thaliana
ATR0661G317 Amborella trichopoda
ATR0753G016 Amborella trichopoda
Atru.chr1.1983 Acer truncatum
BolC5t29527H Brassica oleracea
BraA06t23847Z Brassica rapa
C05p07760 Brassica napus
CAN.G222.58 Capsicum annuum
CANSAT64G1149 Cannabis sativa
CARHR009650 Cardamine hirsuta
Carub.0001s0902 Capsella rubella
Ca_05835_v3 Cicer arietinum L.
CDE07G1026 Ceratophyllum demersum
Cfa007791 Carpinus fangiana
Ciclev10011347m.g Citrus clementina
CiPaw.03G073600 Carya illinoinensis
ClCG05G010640 Citrullus lanatus
COL.COLO4_13423 Corchorus olitorius
Cpa.g.sc340.2 Carica papaya
CsaV3_3G017850 Cucumis sativus L.
CSS0045109 Camellia sinensis var. sinensis
CSS0047431 Camellia sinensis var. sinensis
Dinv28181 Davidia involucrata
ECA238G0700 Erigeron canadensis
Eucgr.F02875 Eucalyptus grandis
FAN19G0914 Fragaria x ananassa
FAN26G0753 Fragaria x ananassa
FvH4_1g30170 Fragaria vesca
FvH4_1g30171 Fragaria vesca
Glyma.02G243500 Glycine max
Glyma.14G212600 Glycine max
Gohir.A08G039000 Gossypium hirsutum
Gohir.D08G049200 Gossypium hirsutum
Gohir.D11G205366 Gossypium hirsutum
Gorai.004G048700 Gossypium raimondii
Gorai.007G220500 Gossypium raimondii
GSVIVG01030674001 Vitis vinifera
HanXRQChr14g0457331 Helianthus annuus
Haze_14281 Corylus avellana
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla
HPP92_026949 Vanilla planifolia
Hund13089 Selenicereus undatus
Lalb_Chr10g0104281 Lupinus albus
Lj4C259T9 Lonicera japonica
LjContig00141g0003453 Lotus japonicus
Lsat_1_v5_gn_2_68461 Lactuca sativa
Manes.01G119900 Manihot esculenta
MBI19_g08382_MAGBIO Magnolia biondii
MD17G1268500 Malus domestica
Medtr5g077930 Medicago truncatula
MELO3C032020.2 Cucumis melo
Migut.K00924 Erythranthe guttata
Nitab4.5_0000201g0030 Nicotiana tabacum
Nitab4.5_0001088g0020 Nicotiana tabacum
Nitab4.5_0001650g0140 Nicotiana tabacum
Nitab4.5_0001650g0170 Nicotiana tabacum
Nitab4.5_0004239g0030 Nicotiana tabacum
Nitab4.5_0005124g0010 Nicotiana tabacum
Nitab4.5_0009075g0010 Nicotiana tabacum
Nitab4.5_0010123g0020 Nicotiana tabacum
Nn3g18372 Nelumbo nucifera
Oeu030299.1 Olea europaea
Os04g0463300 Oryza sativa ssp. japonica
Peaxi162Scf00562g00002 Petunia axillaris
PGR004G2599 Punica granatum
PGSC0003DMG400013237 Solanum tuberosum
Phvul.008G237700 Phaseolus vulgaris
Potri.017G131400 Populus trichocarpa
Prupe.3G166000 Prunus persica
Psat2g047200 Pisum sativum
PSO017G5257 Papaver somniferum
PSO478G2209 Papaver somniferum
QL05p016537 Quercus lobata
QL08p020033 Quercus lobata
RcHm_v2.0_Chr3g0491601 Rosa chinensis
Rhsim10G0178600 Rhododendron simsii
Sabra17G0109500 Salix brachista
SalBow5G0095 Salvia bowleyana
Sc14g0006910 Simmondsia chinensis
Sed0004069 Sechium edule
Sed0020460 Sechium edule
SEGI_34198 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17151 Striga asiatica
Solyc11g011410.3 Solanum lycopersicum
Sopen11g006210 Solanum pennellii
TAR371G0190 Trochodendron aralioides
THA.LOC104805633 Tarenaya hassleriana
Thecc.04G054000 Theobroma cacao
Thhalv10007116m.g Eutrema salsugineum
TPR.G23654 Trifolium pratense
TWI77G0027 Tripterygium wilfordii
VMungo0647G0528 Vigna mungo
Zm00001eb080520 Zea mays
Zm00001eb080530 Zea mays

User provided reference genes

Program Settings