Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia05075 Actinidia chinensis
Aqoxy1G03049 Aquilegia oxysepala
Aqoxy1G03452 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea
ATR0317G118 Amborella trichopoda
ATR0772G056 Amborella trichopoda
Atru.chr2.3499 Acer truncatum
CAN.G337.69 Capsicum annuum
CAN.G492.20 Capsicum annuum
Ca_06340_v3 Cicer arietinum L.
Ca_25812_v3 Cicer arietinum L.
Cc05_g14120 Coffea canephora
CDE08G0529 Ceratophyllum demersum
Cfa020302 Carpinus fangiana
Ciclev10009585m.g Citrus clementina
CiPaw.11G192900 Carya illinoinensis
COL.COLO4_09703 Corchorus olitorius
Cpa.g.sc12.265 Carica papaya
CsaV3_3G004930 Cucumis sativus L.
CSS0027066 Camellia sinensis var. sinensis
DCAR_016720 Daucus carota
Dinv22244 Davidia involucrata
Dinv40786 Davidia involucrata
Duzib170G0581 Durio zibethinus
EL10Ac4g07752 Beta vulgaris
Eucgr.F00716 Eucalyptus grandis
FAN11G1962 Fragaria x ananassa
FAN16G3720 Fragaria x ananassa
FAN21G0453 Fragaria x ananassa
FAN25G0364 Fragaria x ananassa
FAN25G1685 Fragaria x ananassa
FvH4_3g23270 Fragaria vesca
Glyma.02G293000 Glycine max
Glyma.08G319700 Glycine max
Glyma.14G021700 Glycine max
Glyma.18G092800 Glycine max
Gohir.A01G083201 Gossypium hirsutum
Gohir.D01G069700 Gossypium hirsutum
Gorai.002G092100 Gossypium raimondii
GSVIVG01037700001 Vitis vinifera
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla
Lalb_Chr04g0248281 Lupinus albus
Lj1P878T38 Lonicera japonica
Lj6g0001233 Lotus japonicus
Lj6g0015208 Lotus japonicus
LjContig00272g0021523 Lotus japonicus
Manes.03G133100 Manihot esculenta
Manes.15G067900 Manihot esculenta
MBI10_g09179_MAGBIO Magnolia biondii
MD03G1195800 Malus domestica
MD11G1212200 Malus domestica
Medtr3g053160 Medicago truncatula
Medtr5g093430 Medicago truncatula
Medtr5g093440 Medicago truncatula
MELO3C014190.2 Cucumis melo
Migut.H01805 Erythranthe guttata
MSTRG.12988 Avicennia marina
MSTRG.6947 Avicennia marina
Nitab4.5_0000328g0130 Nicotiana tabacum
Nitab4.5_0002826g0080 Nicotiana tabacum
Nitab4.5_0004829g0120 Nicotiana tabacum
Nn1g03444 Nelumbo nucifera
Nn1g07236 Nelumbo nucifera
Oeu008012.1 Olea europaea
Oeu026398.1 Olea europaea
Os01g0532300 Oryza sativa ssp. japonica
Peaxi162Scf00235g00059 Petunia axillaris
PGSC0003DMG400014384 Solanum tuberosum
PGSC0003DMG400022335 Solanum tuberosum
Phvul.006G046800 Phaseolus vulgaris
Phvul.008G269700 Phaseolus vulgaris
Potri.011G087000 Populus trichocarpa
Prupe.4G220200 Prunus persica
Prupe.4G220300 Prunus persica
Psat2g012360 Pisum sativum
Psat2g012400 Pisum sativum
PSO541G2394 Papaver somniferum
QL08p006891 Quercus lobata
RcHm_v2.0_Chr5g0040991 Rosa chinensis
Rhsim06G0222000 Rhododendron simsii
Sabra11G0071000 Salix brachista
Sc03g0008420 Simmondsia chinensis
Sc16g0005830 Simmondsia chinensis
SEGI_03822 Sequoiadendron giganteum
SEGI_40281 Sequoiadendron giganteum
Solyc10g006150.3 Solanum lycopersicum
Sopen07g033030 Solanum pennellii
Sopen10g002100 Solanum pennellii
TAR624G0015 Trochodendron aralioides
TAR626G0917 Trochodendron aralioides
TAR643G0006 Trochodendron aralioides
Thecc.07G031100 Theobroma cacao
TPR.G1179 Trifolium pratense
TPR.G17892 Trifolium pratense
TWI38G0725 Tripterygium wilfordii
VMungo0540G1120 Vigna mungo
VMungo0647G1207 Vigna mungo

User provided reference genes

Program Settings