Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p55480 Brassica napus
Actinidia19362 Actinidia chinensis
AL7G28500 Arabidopsis lyrata
Aqoxy5G03745 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea
AT4G24700 Arabidopsis thaliana
ATR0824G199 Amborella trichopoda
Atru.chr9.2580 Acer truncatum
AUR62008143 Chenopodium quinoa
AUR62028725 Chenopodium quinoa
BcaC06g32867 Brassica carinata
BcaC09g50839 Brassica carinata
BcaNung07358 Brassica carinata
BraA01t01538Z Brassica rapa
CAN.G338.34 Capsicum annuum
CANSAT80G2368 Cannabis sativa
CARHR232080 Cardamine hirsuta
Carub.0007s1636 Capsella rubella
Cc04_g11490 Coffea canephora
Cfa019219 Carpinus fangiana
Cfa019221 Carpinus fangiana
Ciclev10022689m.g Citrus clementina
CiPaw.11G019500 Carya illinoinensis
ClCG03G003000 Citrullus lanatus
COL.COLO4_36758 Corchorus olitorius
Cpa.g.sc159.18 Carica papaya
CsaV3_1G008840 Cucumis sativus L.
CSS0021026 Camellia sinensis var. sinensis
DCAR_021591 Daucus carota
Dinv20598 Davidia involucrata
Dinv38525 Davidia involucrata
Duzib068G0261 Durio zibethinus
Duzib205G0367 Durio zibethinus
ECA247G3499 Erigeron canadensis
EL10Ac5g10655 Beta vulgaris
Eucgr.B00218 Eucalyptus grandis
FAN08G0495 Fragaria x ananassa
FAN13G2123 Fragaria x ananassa
FAN18G1005 Fragaria x ananassa
FvH4_5g06310 Fragaria vesca
Glyma.05G041700 Glycine max
Glyma.17G084500 Glycine max
Gohir.A03G057100 Gossypium hirsutum
Gohir.D03G109300 Gossypium hirsutum
Gorai.003G115400 Gossypium raimondii
HanXRQChr02g0035811 Helianthus annuus
Haze_07589 Corylus avellana
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla
HPP92_004606 Vanilla planifolia
Lalb_Chr12g0201901 Lupinus albus
Lj4g0014699 Lotus japonicus
Lsat_1_v5_gn_1_27760 Lactuca sativa
Manes.06G110400 Manihot esculenta
MBI16_g31776_MAGBIO Magnolia biondii
MD06G1165700 Malus domestica
MD14G1171300 Malus domestica
Medtr4g104870 Medicago truncatula
MELO3C002298.2 Cucumis melo
Migut.O00159 Erythranthe guttata
Nitab4.5_0000003g0840 Nicotiana tabacum
Nitab4.5_0008713g0030 Nicotiana tabacum
Nn3g16691 Nelumbo nucifera
Nn4g22591 Nelumbo nucifera
Oeu023645.1 Olea europaea
Oeu040858.1 Olea europaea
Os02g0595200 Oryza sativa ssp. japonica
PGR083G2149 Punica granatum
PGSC0003DMG400018186 Solanum tuberosum
Phvul.003G205200 Phaseolus vulgaris
Potri.012G086000 Populus trichocarpa
Potri.012G086300 Populus trichocarpa
Potri.015G084200 Populus trichocarpa
Prupe.5G165400 Prunus persica
Psat4g060840 Pisum sativum
PSO541G6268 Papaver somniferum
PSO675G7842 Papaver somniferum
QL10p006874 Quercus lobata
RcHm_v2.0_Chr7g0192551 Rosa chinensis
Rhsim08G0177900 Rhododendron simsii
Rhsim12G0168000 Rhododendron simsii
Sabra12G0061800 Salix brachista
Sabra15G0107300 Salix brachista
SalBow5G2951 Salvia bowleyana
Sc04g0001500 Simmondsia chinensis
Sed0000715 Sechium edule
Sed0006942 Sechium edule
SGA_v2.0_scaffold90G27839 Striga asiatica
Sopen03g031290 Solanum pennellii
TAR371G0969 Trochodendron aralioides
THA.LOC104800396 Tarenaya hassleriana
THA.LOC104800397 Tarenaya hassleriana
THA.LOC104825178 Tarenaya hassleriana
Thecc.03G026000 Theobroma cacao
Thhalv10026466m.g Eutrema salsugineum
TPR.G37551 Trifolium pratense
TWI23G0126 Tripterygium wilfordii
unitig_61.g26472 Utricularia gibba
vmacro19295 Vaccinium macrocarpon
VMungo1215G0926 Vigna mungo
Zm00001eb246040 Zea mays

User provided reference genes

Program Settings