Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p43780 Brassica napus
Aa31LG2G7790 Aethionema arabicum
Actinidia13695 Actinidia chinensis
Actinidia13702 Actinidia chinensis
Actinidia38409 Actinidia chinensis
Actinidia38410 Actinidia chinensis
Ah.02g120040 Amaranthus hybridus
AL5G11420 Arabidopsis lyrata
AL5G11430 Arabidopsis lyrata
Aqoxy5G03884 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0U1JLE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UN0AT6 Arachis hypogaea
AT2G02150 Arabidopsis thaliana
ATR0317G062 Amborella trichopoda
Atru.chr11.1049 Acer truncatum
AUR62017779 Chenopodium quinoa
BcaB07g30705 Brassica carinata
BcaC06g31248 Brassica carinata
BcaC06g34078 Brassica carinata
BolC7t43809H Brassica oleracea
BraA06t27256Z Brassica rapa
C07p33010 Brassica napus
CAN.G1013.31 Capsicum annuum
CANSAT21G0576 Cannabis sativa
CARHR144810 Cardamine hirsuta
Carub.0005s0122 Capsella rubella
Ca_18211_v3 Cicer arietinum L.
Cc10_g12620 Coffea canephora
CDE12G0616 Ceratophyllum demersum
Cfa021290 Carpinus fangiana
Ciclev10004591m.g Citrus clementina
CiPaw.05G161700 Carya illinoinensis
CiPaw.05G161800 Carya illinoinensis
ClCG01G007050 Citrullus lanatus
COL.COLO4_27514 Corchorus olitorius
CsaV3_5G017450 Cucumis sativus L.
CSS0042252 Camellia sinensis var. sinensis
Dinv03747 Davidia involucrata
Dinv28147 Davidia involucrata
ECA246G1804 Erigeron canadensis
EL10Ac6g15406 Beta vulgaris
FAN07G1579 Fragaria x ananassa
FAN12G2685 Fragaria x ananassa
FAN17G2438 Fragaria x ananassa
FAN17G2862 Fragaria x ananassa
FAN17G2962 Fragaria x ananassa
FvH4_4g36310 Fragaria vesca
Glyma.05G135601 Glycine max
Glyma.08G090700 Glycine max
Gohir.A12G152700 Gossypium hirsutum
Gohir.D12G156100 Gossypium hirsutum
Gorai.008G168700 Gossypium raimondii
GSVIVG01010244001 Vitis vinifera
HanXRQChr14g0446881 Helianthus annuus
Haze_01569 Corylus avellana
HPP92_012737 Vanilla planifolia
Lalb_Chr07g0188091 Lupinus albus
Lalb_Chr13g0293071 Lupinus albus
Lj4g0018028 Lotus japonicus
Lsat_1_v5_gn_3_27601 Lactuca sativa
Manes.10G064000 Manihot esculenta
MBI04_g09492_MAGBIO Magnolia biondii
MD13G1010200 Malus domestica
MELO3C033967.2 Cucumis melo
Migut.L00784 Erythranthe guttata
MSTRG.20095 Avicennia marina
Nitab4.5_0000415g0080 Nicotiana tabacum
Nitab4.5_0002936g0010 Nicotiana tabacum
Nn1g01012 Nelumbo nucifera
Oeu001125.1 Olea europaea
Peaxi162Scf00655g00032 Petunia axillaris
PGSC0003DMG401017024 Solanum tuberosum
PGSC0003DMG402017024 Solanum tuberosum
Phvul.002G186700 Phaseolus vulgaris
Potri.010G098400 Populus trichocarpa
Prupe.1G342600 Prunus persica
Psat0s1866g0040 Pisum sativum
PSO063G5648 Papaver somniferum
PSO782G5018 Papaver somniferum
QL03p041883 Quercus lobata
RcHm_v2.0_Chr4g0446071 Rosa chinensis
Rhsim09G0071100 Rhododendron simsii
Sabra10G0070900 Salix brachista
SalBow2G0206 Salvia bowleyana
Sc03g0005490 Simmondsia chinensis
Sed0014874 Sechium edule
SEGI_11241 Sequoiadendron giganteum
SEGI_19561 Sequoiadendron giganteum
SGA_v2.0_scaffold169G38601 Striga asiatica
SGA_v2.0_scaffold4G02164 Striga asiatica
SHI14851 Sapria himalayana
Solyc02g021270.3 Solanum lycopersicum
Sopen02g005740 Solanum pennellii
Sp2g13565 Schrenkiella parvula
TAR636G1662 Trochodendron aralioides
Thecc.02G296100 Theobroma cacao
Thhalv10003688m.g Eutrema salsugineum
TPR.G33063 Trifolium pratense
TPR.G34766 Trifolium pratense
vmacro17185 Vaccinium macrocarpon
VMungo0251G1188 Vigna mungo

User provided reference genes

Program Settings