Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26400 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis
Actinidia07176 Actinidia chinensis
Actinidia24137 Actinidia chinensis
Ah.01g003160 Amaranthus hybridus
AL4G22050 Arabidopsis lyrata
Aqoxy1G01135 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea
AT2G28105 Arabidopsis thaliana
ATR1132G058 Amborella trichopoda
Atru.chr3.3537 Acer truncatum
AUR62014942 Chenopodium quinoa
AUR62029199 Chenopodium quinoa
BcaB01g03091 Brassica carinata
BcaC01g04959 Brassica carinata
BolC3t15512H Brassica oleracea
BraA03t11855Z Brassica rapa
C03p31690 Brassica napus
CAN.G546.21 Capsicum annuum
CARHR120870 Cardamine hirsuta
Carub.0004s0888 Capsella rubella
Cc01_g10460 Coffea canephora
CDE08G1192 Ceratophyllum demersum
Cfa010302 Carpinus fangiana
Ciclev10029419m.g Citrus clementina
CiPaw.13G124600 Carya illinoinensis
ClCG02G021490 Citrullus lanatus
CsaV3_6G014270 Cucumis sativus L.
CSS0017583 Camellia sinensis var. sinensis
CSS0034387 Camellia sinensis var. sinensis
DCAR_018778 Daucus carota
Dinv34730 Davidia involucrata
Duzib147G1262 Durio zibethinus
Duzib168G1093 Durio zibethinus
EL10Ac9g22596 Beta vulgaris
Eucgr.B03939 Eucalyptus grandis
FAN21G3793 Fragaria x ananassa
FAN25G1473 Fragaria x ananassa
FvH4_3g30910 Fragaria vesca
Glyma.13G322700 Glycine max
Gohir.A11G006200 Gossypium hirsutum
Gohir.D11G005300 Gossypium hirsutum
Gorai.007G006500 Gossypium raimondii
GSVIVG01031491001 Vitis vinifera
HanXRQChr09g0259381 Helianthus annuus
Haze_23728 Corylus avellana
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla
HPP92_026750 Vanilla planifolia
Hund08367 Selenicereus undatus
Lalb_Chr24g0394861 Lupinus albus
Lj2C1012G12 Lonicera japonica
Lsat_1_v5_gn_2_96660 Lactuca sativa
Lsat_1_v5_gn_2_99381 Lactuca sativa
Manes.04G014200 Manihot esculenta
MBI11_g41957_MAGBIO Magnolia biondii
MD11G1146400 Malus domestica
MELO3C026944.2 Cucumis melo
Migut.N02567 Erythranthe guttata
MSTRG.17767 Avicennia marina
Nitab4.5_0000329g0280 Nicotiana tabacum
Nitab4.5_0005092g0010 Nicotiana tabacum
Nn6g35262 Nelumbo nucifera
Oeu018477.1 Olea europaea
Peaxi162Scf00892g00019 Petunia axillaris
PGR102G0900 Punica granatum
PGSC0003DMG400000407 Solanum tuberosum
PGSC0003DMG400010906 Solanum tuberosum
Phvul.005G131100 Phaseolus vulgaris
Potri.004G215300 Populus trichocarpa
Pp3c2_14140 Physcomitrium patens
Prupe.6G109500 Prunus persica
PSO210G2188 Papaver somniferum
PSO210G3489 Papaver somniferum
QL01p015485 Quercus lobata
QL01p015526 Quercus lobata
RcHm_v2.0_Chr5g0057451 Rosa chinensis
Rhsim13G0099600 Rhododendron simsii
Sabra04G0146300 Salix brachista
SalBow1G5708 Salvia bowleyana
SalBow3G3637 Salvia bowleyana
Sed0010722 Sechium edule
SEGI_19183 Sequoiadendron giganteum
SGA_v2.0_scaffold436G51603 Striga asiatica
Solyc01g034070.2 Solanum lycopersicum
Solyc11g066240.3 Solanum lycopersicum
Sopen01g017570 Solanum pennellii
Sopen11g025970 Solanum pennellii
Sp4g10910 Schrenkiella parvula
TAR633G0300 Trochodendron aralioides
TAR636G3027 Trochodendron aralioides
THA.LOC104800583 Tarenaya hassleriana
THA.LOC104808393 Tarenaya hassleriana
Thecc.09G349300 Theobroma cacao
Thecc.09G349500 Theobroma cacao
Thhalv10017338m.g Eutrema salsugineum
unitig_27.g25050 Utricularia gibba
vmacro03264 Vaccinium macrocarpon
VMungo1080G0225 Vigna mungo

User provided reference genes

Program Settings