Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00400 Brassica napus
Actinidia16375 Actinidia chinensis
Ah.06g194500 Amaranthus hybridus
AL6G11100 Arabidopsis lyrata
Aqoxy1G00452 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DBR4AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7VIMI Arachis hypogaea
AT5G01110 Arabidopsis thaliana
ATR0810G198 Amborella trichopoda
ATR0829G035 Amborella trichopoda
Atru.chr3.2773 Acer truncatum
AUR62000183 Chenopodium quinoa
AUR62006535 Chenopodium quinoa
BcaB01g06086 Brassica carinata
BcaB01g06201 Brassica carinata
BolC3t12630H Brassica oleracea
BolC3t13332H Brassica oleracea
BraA03t09431Z Brassica rapa
C03p00670 Brassica napus
CAN.G113.7 Capsicum annuum
CANSAT25G1433 Cannabis sativa
CARHR211430 Cardamine hirsuta
Carub.0006s0076 Capsella rubella
Ca_06217_v3 Cicer arietinum L.
Cc01_g05470 Coffea canephora
Cfa009846 Carpinus fangiana
Ciclev10017597m.g Citrus clementina
CiPaw.13G151600 Carya illinoinensis
ClCG03G012670 Citrullus lanatus
COL.COLO4_05199 Corchorus olitorius
Cpa.g.sc84.2 Carica papaya
CsaV3_1G043280 Cucumis sativus L.
CSS0022782 Camellia sinensis var. sinensis
CSS0035807 Camellia sinensis var. sinensis
DCAR_002103 Daucus carota
Dinv36177 Davidia involucrata
ECA232G4213 Erigeron canadensis
EL10Ac4g10136 Beta vulgaris
EL10Ac4g10151 Beta vulgaris
Eucgr.C02447 Eucalyptus grandis
FAN11G1556 Fragaria x ananassa
FAN16G2585 Fragaria x ananassa
FAN21G3198 Fragaria x ananassa
FAN25G1872 Fragaria x ananassa
FvH4_3g27950 Fragaria vesca
Glyma.14G034400 Glycine max
Gohir.A07G120400 Gossypium hirsutum
Gohir.D07G124600 Gossypium hirsutum
Gorai.001G134400 Gossypium raimondii
GSVIVG01037263001 Vitis vinifera
HanXRQChr06g0182581 Helianthus annuus
Haze_23220 Corylus avellana
HPP92_001923 Vanilla planifolia
Lalb_Chr10g0106311 Lupinus albus
Lj1C286T3 Lonicera japonica
LjContig00049g0012641 Lotus japonicus
Lsat_1_v5_gn_9_106260 Lactuca sativa
Manes.01G179100 Manihot esculenta
Manes.01G179300 Manihot esculenta
MBI01_g10232_MAGBIO Magnolia biondii
MD02G1234700 Malus domestica
MD02G1235100 Malus domestica
MD07G1079700 Malus domestica
Medtr5g089850 Medicago truncatula
Medtr5g090210 Medicago truncatula
MELO3C015131.2 Cucumis melo
Migut.N02370 Erythranthe guttata
MSTRG.12443 Avicennia marina
Nitab4.5_0000276g0130 Nicotiana tabacum
Nitab4.5_0000456g0150 Nicotiana tabacum
Nitab4.5_0002583g0010 Nicotiana tabacum
Nn7g36673 Nelumbo nucifera
Oeu039576.1 Olea europaea
Os03g0165100 Oryza sativa ssp. japonica
Peaxi162Scf01229g00021 Petunia axillaris
PGR102G2888 Punica granatum
PGSC0003DMG400001336 Solanum tuberosum
PGSC0003DMG401009622 Solanum tuberosum
Phvul.008G200500 Phaseolus vulgaris
Potri.001G276500 Populus trichocarpa
Prupe.2G102900 Prunus persica
Psat2g019880 Pisum sativum
PSO339G2893 Papaver somniferum
PSO384G2302 Papaver somniferum
QL04p014212 Quercus lobata
RcHm_v2.0_Chr5g0050671 Rosa chinensis
Rhsim13G0211000 Rhododendron simsii
Sabra16G0170400 Salix brachista
Sabra16G0170600 Salix brachista
SalBow4G0419 Salvia bowleyana
Sc16g0011110 Simmondsia chinensis
Sed0025332 Sechium edule
SEGI_12665 Sequoiadendron giganteum
SGA_v2.0_scaffold496G52473 Striga asiatica
Solyc04g057780.4 Solanum lycopersicum
Sopen04g025650 Solanum pennellii
Sp6g40500 Schrenkiella parvula
TAR636G1848 Trochodendron aralioides
Thecc.09G249700 Theobroma cacao
Thhalv10012778m.g Eutrema salsugineum
TPR.G19357 Trifolium pratense
TWI79G0736 Tripterygium wilfordii
VMungo0647G0695 Vigna mungo

User provided reference genes

Program Settings