Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11750 Brassica napus
Actinidia22395 Actinidia chinensis
Ah.11g038960 Amaranthus hybridus
Aqoxy7G03766 Aquilegia oxysepala
AT4G19890 Arabidopsis thaliana
ATR0049G016 Amborella trichopoda
Atru.chr10.530 Acer truncatum
AUR62034958 Chenopodium quinoa
AUR62035769 Chenopodium quinoa
BcaB06g28419 Brassica carinata
BcaB06g28505 Brassica carinata
BcaC09g51360 Brassica carinata
BcaNung01745 Brassica carinata
BolC1t01361H Brassica oleracea
BolC4t27551H Brassica oleracea
BraA01t01117Z Brassica rapa
C01p13940 Brassica napus
C04p60520 Brassica napus
CAN.G149.50 Capsicum annuum
CANSAT80G1475 Cannabis sativa
CANSAT80G1820 Cannabis sativa
CARHR226670 Cardamine hirsuta
Carub.0007s2132 Capsella rubella
Ca_04050_v3 Cicer arietinum L.
Cc09_g06120 Coffea canephora
Cfa000712 Carpinus fangiana
Ciclev10014445m.g Citrus clementina
CiPaw.09G077400 Carya illinoinensis
ClCG01G009470 Citrullus lanatus
COL.COLO4_30991 Corchorus olitorius
Cpa.g.sc135.9 Carica papaya
CsaV3_1G046310 Cucumis sativus L.
CSS0002129 Camellia sinensis var. sinensis
DCAR_003780 Daucus carota
Dinv02254 Davidia involucrata
Duzib235G1301 Durio zibethinus
EL10Ac1g02315 Beta vulgaris
Eucgr.E01791 Eucalyptus grandis
Eucgr.E01795 Eucalyptus grandis
Eucgr.E01800 Eucalyptus grandis
Eucgr.E01806 Eucalyptus grandis
Eucgr.E01833 Eucalyptus grandis
Eucgr.E01847 Eucalyptus grandis
Eucgr.E01848 Eucalyptus grandis
Eucgr.E01870 Eucalyptus grandis
FvH4_3g12270 Fragaria vesca
Glyma.09G242500 Glycine max
Gohir.A05G145400 Gossypium hirsutum
Gohir.D05G147800 Gossypium hirsutum
Gorai.009G151900 Gossypium raimondii
HanXRQChr14g0447351 Helianthus annuus
Haze_06038 Corylus avellana
Haze_06039 Corylus avellana
HPP92_005782 Vanilla planifolia
HPP92_005808 Vanilla planifolia
Lalb_Chr01g0021581 Lupinus albus
Lj2C350T3 Lonicera japonica
Lj3g0009249 Lotus japonicus
Lsat_1_v5_gn_2_63940 Lactuca sativa
Manes.15G044700 Manihot esculenta
MBI03_g16306_MAGBIO Magnolia biondii
MD05G1251800 Malus domestica
MD10G1232900 Malus domestica
Medtr7g007400 Medicago truncatula
Medtr7g405940 Medicago truncatula
MELO3C021752.2 Cucumis melo
Migut.F01393 Erythranthe guttata
MSTRG.16346 Avicennia marina
Nitab4.5_0000029g0150 Nicotiana tabacum
Nitab4.5_0013428g0020 Nicotiana tabacum
Oeu060350.1 Olea europaea
Os11g0607100 Oryza sativa ssp. japonica
Peaxi162Scf00149g00061 Petunia axillaris
PGR042G2360 Punica granatum
PGSC0003DMG400010332 Solanum tuberosum
Phvul.008G046300 Phaseolus vulgaris
Potri.015G121700 Populus trichocarpa
Prupe.4G111800 Prunus persica
Psat0s929g0160 Pisum sativum
PSO210G3018 Papaver somniferum
PSO210G5823 Papaver somniferum
RcHm_v2.0_Chr5g0020081 Rosa chinensis
RcHm_v2.0_Chr7g0211421 Rosa chinensis
Rhsim08G0175300 Rhododendron simsii
Sabra15G0138100 Salix brachista
SalBow6G0510 Salvia bowleyana
Sc02g0008330 Simmondsia chinensis
Sed0017437 Sechium edule
SEGI_11644 Sequoiadendron giganteum
SEGI_34940 Sequoiadendron giganteum
SGA_v2.0_scaffold298G47685 Striga asiatica
SHI24856 Sapria himalayana
Solyc02g068890.3 Solanum lycopersicum
Sopen02g017990 Solanum pennellii
TAR633G0007 Trochodendron aralioides
THA.LOC104811547 Tarenaya hassleriana
Thecc.06G142300 Theobroma cacao
Thecc.06G142600 Theobroma cacao
Thecc.06G142800 Theobroma cacao
Thhalv10027430m.g Eutrema salsugineum
TWI38G1636 Tripterygium wilfordii
VMungo1383G3026 Vigna mungo
Zm00001eb167160 Zea mays

User provided reference genes

Program Settings