Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia23744 Actinidia chinensis
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea
Atru.chr5.1886 Acer truncatum
CANSAT01G2272 Cannabis sativa
CANSAT01G2831 Cannabis sativa
Ca_08774_v3 Cicer arietinum L.
Ca_09620_v3 Cicer arietinum L.
Cc01_g17390 Coffea canephora
Ciclev10022672m.g Citrus clementina
Ciclev10022773m.g Citrus clementina
CiPaw.03G152700 Carya illinoinensis
CiPaw.04G107700 Carya illinoinensis
CiPaw.04G107800 Carya illinoinensis
ClCG09G009270 Citrullus lanatus
ClCG09G009340 Citrullus lanatus
COL.COLO4_17317 Corchorus olitorius
COL.COLO4_28358 Corchorus olitorius
Cpa.g.sc8.193 Carica papaya
CsaV3_3G039490 Cucumis sativus L.
CsaV3_7G025650 Cucumis sativus L.
CsaV3_7G025680 Cucumis sativus L.
CSS0029156 Camellia sinensis var. sinensis
CSS0036288 Camellia sinensis var. sinensis
DCAR_004704 Daucus carota
DCAR_012627 Daucus carota
Dinv19234 Davidia involucrata
Duzib138G0914 Durio zibethinus
Duzib138G0919 Durio zibethinus
Duzib138G1712 Durio zibethinus
Duzib211G0080 Durio zibethinus
ECA236G2240 Erigeron canadensis
FAN15G2923 Fragaria x ananassa
FAN24G2151 Fragaria x ananassa
FAN27G1788 Fragaria x ananassa
FvH4_2g19680 Fragaria vesca
Glyma.03G170800 Glycine max
Glyma.03G170900 Glycine max
Glyma.10G043100 Glycine max
Glyma.13G130600 Glycine max
Glyma.19G171800 Glycine max
Glyma.19G171900 Glycine max
Gohir.A07G154300 Gossypium hirsutum
Gohir.A07G154400 Gossypium hirsutum
Gohir.A08G193800 Gossypium hirsutum
Gohir.D07G160600 Gossypium hirsutum
Gohir.D07G160800 Gossypium hirsutum
Gohir.D08G211500 Gossypium hirsutum
Gorai.001G183600 Gossypium raimondii
Gorai.001G183700 Gossypium raimondii
Gorai.004G224800 Gossypium raimondii
Haze_24760 Corylus avellana
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla
Lalb_Chr01g0019331 Lupinus albus
Lalb_Chr02g0152981 Lupinus albus
Lalb_Chr25g0289621 Lupinus albus
Lj1g0008336 Lotus japonicus
Lj1g0018605 Lotus japonicus
Lj5g0001944 Lotus japonicus
Manes.12G043600 Manihot esculenta
Manes.13G043400 Manihot esculenta
MD05G1181500 Malus domestica
Medtr1g069085 Medicago truncatula
Medtr7g099670 Medicago truncatula
MELO3C012793.2 Cucumis melo
MELO3C024161.2 Cucumis melo
MELO3C024163.2 Cucumis melo
Migut.D00508 Erythranthe guttata
Migut.N02250 Erythranthe guttata
MSTRG.12503 Avicennia marina
MSTRG.17537 Avicennia marina
MSTRG.21440 Avicennia marina
Nitab4.5_0001740g0060 Nicotiana tabacum
Nn1g03106 Nelumbo nucifera
Nn3g19877 Nelumbo nucifera
Phvul.001G168900 Phaseolus vulgaris
Phvul.007G156700 Phaseolus vulgaris
Potri.002G252200 Populus trichocarpa
Potri.002G252400 Populus trichocarpa
Prupe.8G208000 Prunus persica
Psat0s1775g0360 Pisum sativum
Psat3g049800 Pisum sativum
Psat6g064560 Pisum sativum
Psat6g065640 Pisum sativum
PSO017G4218 Papaver somniferum
PSO063G2436 Papaver somniferum
QL09p044388 Quercus lobata
QL09p044390 Quercus lobata
RcHm_v2.0_Chr6g0285411 Rosa chinensis
Rhsim13G0042300 Rhododendron simsii
Sabra02G0191700 Salix brachista
SalBow4G2254 Salvia bowleyana
Sed0003179 Sechium edule
Sed0020523 Sechium edule
SGA_v2.0_scaffold1G00704 Striga asiatica
SGA_v2.0_scaffold42G16152 Striga asiatica
SGA_v2.0_scaffold8G04664 Striga asiatica
TAR362G1030 Trochodendron aralioides
Thecc.01G231600 Theobroma cacao
Thecc.01G231700 Theobroma cacao
TWI59G1478 Tripterygium wilfordii
unitig_22.g6317 Utricularia gibba
unitig_8.g3079 Utricularia gibba
unitig_8.g3750 Utricularia gibba
VMungo1383G3325 Vigna mungo

User provided reference genes

Program Settings