Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11950 Brassica napus
Aa31LG2G3920 Aethionema arabicum
Aa31LG9G16690 Aethionema arabicum
Actinidia17580 Actinidia chinensis
Actinidia26249 Actinidia chinensis
AL5G19460 Arabidopsis lyrata
AL7G51220 Arabidopsis lyrata
Aqoxy3G03598 Aquilegia oxysepala
AT3G29370 Arabidopsis thaliana
AT5G39240 Arabidopsis thaliana
ATR0064G025 Amborella trichopoda
BcaB06g27281 Brassica carinata
BcaC02g09685 Brassica carinata
BolC4t26142H Brassica oleracea
BraA04t16860Z Brassica rapa
C04p45600 Brassica napus
CAN.G206.219 Capsicum annuum
CAN.G398.10 Capsicum annuum
CANSAT64G0406 Cannabis sativa
CARHR263170 Cardamine hirsuta
Carub.0005s0809 Capsella rubella
Carub.0007s3668 Capsella rubella
Cc07_g04120 Coffea canephora
CDE10G0699 Ceratophyllum demersum
Cfa007655 Carpinus fangiana
Ciclev10013609m.g Citrus clementina
CiPaw.03G089400 Carya illinoinensis
ClCG07G007410 Citrullus lanatus
ClCG11G004700 Citrullus lanatus
COL.COLO4_00052 Corchorus olitorius
Cpa.g.sc3362.1 Carica papaya
CSS0009905 Camellia sinensis var. sinensis
CSS0018085 Camellia sinensis var. sinensis
CSS0018963 Camellia sinensis var. sinensis
DCAR_011043 Daucus carota
Duzib147G0133 Durio zibethinus
Eucgr.I02025 Eucalyptus grandis
FAN02G2783 Fragaria x ananassa
FAN05G2048 Fragaria x ananassa
FAN09G1793 Fragaria x ananassa
FAN14G4532 Fragaria x ananassa
FvH4_6g47010 Fragaria vesca
Glyma.13G057000 Glycine max
Glyma.19G029200 Glycine max
Gohir.A05G371900 Gossypium hirsutum
Gohir.D04G043900 Gossypium hirsutum
Gorai.012G049200 Gossypium raimondii
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla
HPP92_023631 Vanilla planifolia
Lalb_Chr02g0158971 Lupinus albus
Lalb_Chr06g0174991 Lupinus albus
Lalb_Chr21g0318381 Lupinus albus
Lj2g0007962 Lotus japonicus
Lsat_1_v5_gn_2_87601 Lactuca sativa
Lsat_1_v5_gn_4_171221 Lactuca sativa
Manes.01G097200 Manihot esculenta
Manes.02G054200 Manihot esculenta
MD09G1064600 Malus domestica
MD17G1057900 Malus domestica
Medtr6g015150 Medicago truncatula
MELO3C022028.2 Cucumis melo
MELO3C024851.2 Cucumis melo
Migut.H00635 Erythranthe guttata
Migut.K01283 Erythranthe guttata
Nitab4.5_0000565g0230 Nicotiana tabacum
Nitab4.5_0005916g0020 Nicotiana tabacum
Nitab4.5_0010051g0020 Nicotiana tabacum
Nn3g17420 Nelumbo nucifera
Nn4g23392 Nelumbo nucifera
Oeu007062.1 Olea europaea
Oeu010247.1 Olea europaea
Oeu062157.1 Olea europaea
PGR004G0469 Punica granatum
PGSC0003DMG400025144 Solanum tuberosum
Phvul.004G035200 Phaseolus vulgaris
Potri.004G119600 Populus trichocarpa
Potri.017G093000 Populus trichocarpa
Prupe.3G256400 Prunus persica
Psat1g067640 Pisum sativum
QL02p067998 Quercus lobata
RcHm_v2.0_Chr2g0166071 Rosa chinensis
Rhsim08G0074700 Rhododendron simsii
Sabra04G0069100 Salix brachista
Sabra17G0082000 Salix brachista
SalBow1G0329 Salvia bowleyana
SalBow1G6503 Salvia bowleyana
Sc14g0006230 Simmondsia chinensis
Sed0019528 Sechium edule
SGA_v2.0_scaffold148G36473 Striga asiatica
SGA_v2.0_scaffold52G19169 Striga asiatica
Solyc02g066970.1 Solanum lycopersicum
Solyc02g088740.1 Solanum lycopersicum
Sopen02g016170 Solanum pennellii
Sopen02g033450 Solanum pennellii
Sp7g02750 Schrenkiella parvula
TAR629G1767 Trochodendron aralioides
THA.LOC104825781 Tarenaya hassleriana
THA.LOC109116393 Tarenaya hassleriana
Thecc.04G093400 Theobroma cacao
Thhalv10027993m.g Eutrema salsugineum
TPR.G10008 Trifolium pratense
TWI34G0597 Tripterygium wilfordii
unitig_62.g23378 Utricularia gibba
VMungo0464G1276 Vigna mungo

User provided reference genes

Program Settings