Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25200 Brassica napus
Aa31LG11G8360 Aethionema arabicum
Actinidia18473 Actinidia chinensis
Ah.13g071510 Amaranthus hybridus
AL5G28320 Arabidopsis lyrata
Aqoxy2G02657 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LQ1LZI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9JLFB Arachis hypogaea
AT3G48810 Arabidopsis thaliana
ATR1120G035 Amborella trichopoda
Atru.chr4.3064 Acer truncatum
AUR62016244 Chenopodium quinoa
AUR62032777 Chenopodium quinoa
BcaB05g22985 Brassica carinata
BcaC09g49905 Brassica carinata
BolC1t03079H Brassica oleracea
BraA01t02429Z Brassica rapa
C01p31450 Brassica napus
CAN.G281.9 Capsicum annuum
CAN.G582.2 Capsicum annuum
CANSAT78G0164 Cannabis sativa
CARHR157620 Cardamine hirsuta
Carub.0005s1497 Capsella rubella
Ca_12492_v3 Cicer arietinum L.
Cc01_g05040 Coffea canephora
CDE09G0789 Ceratophyllum demersum
Cfa015278 Carpinus fangiana
Ciclev10004501m.g Citrus clementina
CiPaw.01G134800 Carya illinoinensis
ClCG06G004440 Citrullus lanatus
COL.COLO4_34570 Corchorus olitorius
Cpa.g.sc9.15 Carica papaya
CsaV3_6G028460 Cucumis sativus L.
CsaV3_6G028470 Cucumis sativus L.
CsaV3_UNG230130 Cucumis sativus L.
CSS0015011 Camellia sinensis var. sinensis
CSS0038203 Camellia sinensis var. sinensis
DCAR_030451 Daucus carota
Dinv44256 Davidia involucrata
Duzib052G0390 Durio zibethinus
ECA233G1627 Erigeron canadensis
EL10Ac3g05549 Beta vulgaris
Eucgr.B03979 Eucalyptus grandis
FAN07G1068 Fragaria x ananassa
FAN12G2839 Fragaria x ananassa
FvH4_4g20630 Fragaria vesca
Glyma.07G160400 Glycine max
Glyma.20G007500 Glycine max
Gohir.A01G035500 Gossypium hirsutum
Gohir.D01G023574 Gossypium hirsutum
Gorai.002G031400 Gossypium raimondii
GSVIVG01034953001 Vitis vinifera
HanXRQChr14g0427751 Helianthus annuus
Haze_01348 Corylus avellana
Hma1.2p1_0013F.1_g008270 Hydrangea macrophylla
Hund11993 Selenicereus undatus
Lj3g0009247 Lotus japonicus
Lj6P694T20 Lonicera japonica
Lsat_1_v5_gn_6_380 Lactuca sativa
Manes.11G109300 Manihot esculenta
MBI19_g03276_MAGBIO Magnolia biondii
MD13G1149200 Malus domestica
Medtr1g035250 Medicago truncatula
MELO3C021257.2 Cucumis melo
Migut.G00038 Erythranthe guttata
Migut.O00586 Erythranthe guttata
MSTRG.10167 Avicennia marina
Nitab4.5_0000225g0060 Nicotiana tabacum
Nitab4.5_0004303g0030 Nicotiana tabacum
Nn4g25527 Nelumbo nucifera
Oeu022733.1 Olea europaea
Os05g0132000 Oryza sativa ssp. japonica
PGR031G2326 Punica granatum
PGSC0003DMG400015966 Solanum tuberosum
Phvul.003G009700 Phaseolus vulgaris
Potri.008G102100 Populus trichocarpa
Potri.010G148700 Populus trichocarpa
Prupe.1G113200 Prunus persica
Psat6g097560 Pisum sativum
PSO541G6128 Papaver somniferum
PSO675G5494 Papaver somniferum
QL06p012977 Quercus lobata
RcHm_v2.0_Chr4g0425991 Rosa chinensis
RcHm_v2.0_Chr4g0426031 Rosa chinensis
Rhsim04G0242000 Rhododendron simsii
Sabra10G0114800 Salix brachista
Sc19g0002720 Simmondsia chinensis
Sed0014802 Sechium edule
SGA_v2.0_scaffold64G22096 Striga asiatica
SHI00109 Sapria himalayana
Solyc01g058205.1 Solanum lycopersicum
Sopen01g023670 Solanum pennellii
Sp5g13220 Schrenkiella parvula
TAR365G0882 Trochodendron aralioides
TAR365G1249 Trochodendron aralioides
THA.LOC104818868 Tarenaya hassleriana
Thecc.04G305700 Theobroma cacao
Thhalv10010184m.g Eutrema salsugineum
TPR.G18613 Trifolium pratense
TWI09G0724 Tripterygium wilfordii
unitig_88.g27702 Utricularia gibba
vmacro09710 Vaccinium macrocarpon
VMungo1215G2624 Vigna mungo
Zm00001eb354830 Zea mays

User provided reference genes

Program Settings