Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18050 Brassica napus
A08p20700 Brassica napus
Aa31LG5G12120 Aethionema arabicum
AL7G26030 Arabidopsis lyrata
Aqoxy1G04156 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A282I6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T57YAK Arachis hypogaea
AT4G26810 Arabidopsis thaliana
BcaB03g12510 Brassica carinata
BcaC07g38252 Brassica carinata
BolC1t02235H Brassica oleracea
BolC8t48675H Brassica oleracea
BraA01t01760Z Brassica rapa
BraA08t34024Z Brassica rapa
C01p23010 Brassica napus
C08p09980 Brassica napus
CAN.G337.61 Capsicum annuum
CAN.G337.62 Capsicum annuum
CANSAT56G2083 Cannabis sativa
CARHR234430 Cardamine hirsuta
Carub.0007s1403 Capsella rubella
Cc05_g14250 Coffea canephora
CDE02G1939 Ceratophyllum demersum
CDE11G1083 Ceratophyllum demersum
Ciclev10010012m.g Citrus clementina
CiPaw.12G133300 Carya illinoinensis
ClCG04G002280 Citrullus lanatus
COL.COLO4_09723 Corchorus olitorius
Cpa.g.sc284.9 Carica papaya
CsaV3_4G030840 Cucumis sativus L.
CSS0004760 Camellia sinensis var. sinensis
CSS0024685 Camellia sinensis var. sinensis
CSS0037913 Camellia sinensis var. sinensis
CSS0047330 Camellia sinensis var. sinensis
CSS0047353 Camellia sinensis var. sinensis
DCAR_030723 Daucus carota
Duzib170G0659 Durio zibethinus
ECA240G1072 Erigeron canadensis
EL10Ac4g07701 Beta vulgaris
Eucgr.F00653 Eucalyptus grandis
Eucgr.F00655 Eucalyptus grandis
FAN11G2811 Fragaria x ananassa
FAN21G0570 Fragaria x ananassa
FAN25G2631 Fragaria x ananassa
FAN25G3507 Fragaria x ananassa
FvH4_3g23500 Fragaria vesca
Glyma.08G321900 Glycine max
Glyma.18G090500 Glycine max
Gohir.A13G136700 Gossypium hirsutum
Gohir.D13G141100 Gossypium hirsutum
Gorai.013G157900 Gossypium raimondii
GSVIVG01037716001 Vitis vinifera
HanXRQChr03g0076811 Helianthus annuus
HPP92_004747 Vanilla planifolia
HPP92_004752 Vanilla planifolia
Hund23200 Selenicereus undatus
Lalb_Chr15g0081671 Lupinus albus
Lalb_Chr15g0081741 Lupinus albus
Lj6g0015280 Lotus japonicus
Lsat_1_v5_gn_9_93280 Lactuca sativa
Manes.03G136902 Manihot esculenta
MBI19_g29450_MAGBIO Magnolia biondii
MD03G1193900 Malus domestica
Medtr3g054150 Medicago truncatula
Medtr3g054160 Medicago truncatula
MELO3C014274.2 Cucumis melo
Migut.M01714 Erythranthe guttata
MSTRG.6957 Avicennia marina
Nitab4.5_0000984g0030 Nicotiana tabacum
Nitab4.5_0002826g0030 Nicotiana tabacum
Nn6g34450 Nelumbo nucifera
Oeu013118.1 Olea europaea
Os09g0133000 Oryza sativa ssp. japonica
Peaxi162Scf00235g00615 Petunia axillaris
PGR083G0521 Punica granatum
PGSC0003DMG400022302 Solanum tuberosum
Phvul.006G048200 Phaseolus vulgaris
Potri.015G137600 Populus trichocarpa
Prupe.4G222800 Prunus persica
Psat5g226320 Pisum sativum
PSO210G4797 Papaver somniferum
QL08p007408 Quercus lobata
RcHm_v2.0_Chr5g0041331 Rosa chinensis
Rhsim06G0222900 Rhododendron simsii
Sabra15G0149000 Salix brachista
SalBow2G0902 Salvia bowleyana
Sc26g0002620 Simmondsia chinensis
Sed0005824 Sechium edule
SGA_v2.0_scaffold19G08742 Striga asiatica
SGA_v2.0_scaffold79G25647 Striga asiatica
SHI26574 Sapria himalayana
Solyc07g064920.3 Solanum lycopersicum
Sopen07g033120 Solanum pennellii
Sp7g24790 Schrenkiella parvula
TAR626G1964 Trochodendron aralioides
THA.LOC104817679 Tarenaya hassleriana
Thecc.07G028800 Theobroma cacao
Thhalv10026656m.g Eutrema salsugineum
TPR.G32227 Trifolium pratense
TWI38G0075 Tripterygium wilfordii
TWI38G0751 Tripterygium wilfordii
unitig_46.g18284 Utricularia gibba
vmacro22317 Vaccinium macrocarpon
Zm00001eb083300 Zea mays
Zm00001eb083370 Zea mays

User provided reference genes

Program Settings