Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p22290 Brassica napus
Aa31LG2G17160 Aethionema arabicum
Aa31LG4G13610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis
Actinidia06350 Actinidia chinensis
Actinidia22459 Actinidia chinensis
AL5G22060 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea
AT3G44020 Arabidopsis thaliana
ATR0697G291 Amborella trichopoda
Atru.chr3.3047 Acer truncatum
Atru.chr3.3056 Acer truncatum
AUR62020198 Chenopodium quinoa
BcaB01g01208 Brassica carinata
BcaC01g02084 Brassica carinata
BolC3t19129H Brassica oleracea
BraA06t25313Z Brassica rapa
C03p68750 Brassica napus
CAN.G742.2 Capsicum annuum
CANSAT54G0888 Cannabis sativa
CARHR152710 Cardamine hirsuta
Carub.0005s0977 Capsella rubella
Cc01_g05490 Coffea canephora
Cc01_g08020 Coffea canephora
CDE07G1152 Ceratophyllum demersum
Cfa010224 Carpinus fangiana
Ciclev10029424m.g Citrus clementina
CiPaw.13G125500 Carya illinoinensis
ClCG06G014160 Citrullus lanatus
COL.COLO4_25390 Corchorus olitorius
Cre03.g201050 Chlamydomonas reinhardtii
CsaV3_1G004520 Cucumis sativus L.
CSS0023504 Camellia sinensis var. sinensis
DCAR_012259 Daucus carota
Dinv18872 Davidia involucrata
Duzib168G1424 Durio zibethinus
Duzib170G0509 Durio zibethinus
EL10Ac7g16260 Beta vulgaris
Eucgr.J00596 Eucalyptus grandis
FAN11G1199 Fragaria x ananassa
FAN16G0622 Fragaria x ananassa
FAN21G2595 Fragaria x ananassa
FvH4_3g26920 Fragaria vesca
Glyma.02G271400 Glycine max
Glyma.14G019700 Glycine max
Glyma.14G019800 Glycine max
Gohir.A07G113900 Gossypium hirsutum
Gohir.D07G117600 Gossypium hirsutum
Gorai.001G126500 Gossypium raimondii
GSVIVG01037526001 Vitis vinifera
HanXRQChr13g0404191 Helianthus annuus
Haze_23611 Corylus avellana
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla
HPP92_000979 Vanilla planifolia
Hund18815 Selenicereus undatus
Lalb_Chr10g0105741 Lupinus albus
Lj2E833T0 Lonicera japonica
LjContig00564g0003226 Lotus japonicus
Lsat_1_v5_gn_6_49101 Lactuca sativa
Manes.04G063400 Manihot esculenta
Mapoly0036s0048 Marchantia polymorpha
MBI11_g24562_MAGBIO Magnolia biondii
MCO03G284 Micromonas commoda
MD03G1161000 Malus domestica
MD11G1177000 Malus domestica
Medtr5g086670 Medicago truncatula
MELO3C017379.2 Cucumis melo
Migut.N02430 Erythranthe guttata
MSTRG.18802 Avicennia marina
Nitab4.5_0002498g0050 Nicotiana tabacum
Nitab4.5_0007815g0030 Nicotiana tabacum
Nn6g33246 Nelumbo nucifera
Oeu048815.1 Olea europaea
Os01g0930000 Oryza sativa ssp. japonica
Peaxi162Scf00259g00119 Petunia axillaris
PGR119G2080 Punica granatum
PGSC0003DMG401003010 Solanum tuberosum
Phvul.008G210600 Phaseolus vulgaris
Potri.009G155700 Populus trichocarpa
Pp3c11_5080 Physcomitrium patens
Pp3c7_23060 Physcomitrium patens
Prupe.6G149200 Prunus persica
Psat2g023920 Pisum sativum
PSO339G5659 Papaver somniferum
PSO384G3190 Papaver somniferum
QL01p018876 Quercus lobata
RcHm_v2.0_Chr5g0049271 Rosa chinensis
Rhsim01G0198300 Rhododendron simsii
Sabra09G0122000 Salix brachista
Sc21g0006670 Simmondsia chinensis
Sed0019994 Sechium edule
SEGI_05685 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04014 Striga asiatica
Solyc11g071710.2 Solanum lycopersicum
Sopen11g029380 Solanum pennellii
Sp5g17280 Schrenkiella parvula
TAR623G0701 Trochodendron aralioides
Thecc.09G269700 Theobroma cacao
Thhalv10021645m.g Eutrema salsugineum
TPR.G22173 Trifolium pratense
unitig_22.g6168 Utricularia gibba
vmacro14306 Vaccinium macrocarpon
VMungo0647G0066 Vigna mungo
Zm00001eb370040 Zea mays

User provided reference genes

Program Settings