Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13820 Brassica napus
Actinidia25792 Actinidia chinensis
Ah.02g111990 Amaranthus hybridus
AL3G53530 Arabidopsis lyrata
Aqoxy5G00227 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea
AT2G20515 Arabidopsis thaliana
ATR0414G002 Amborella trichopoda
ATR0736G122 Amborella trichopoda
ATR0807G111 Amborella trichopoda
Atru.chr5.1691 Acer truncatum
AUR62024717 Chenopodium quinoa
BcaB01g04373 Brassica carinata
BcaB08g34913 Brassica carinata
BcaC01g06392 Brassica carinata
BolC3t14048H Brassica oleracea
BraA03t10685Z Brassica rapa
C03p16260 Brassica napus
CANSAT01G1440 Cannabis sativa
CARHR111060 Cardamine hirsuta
Carub.0003s3497 Capsella rubella
Cc01_g18330 Coffea canephora
Cfa002427 Carpinus fangiana
Ciclev10024115m.g Citrus clementina
CiPaw.04G186800 Carya illinoinensis
ClCG09G007810 Citrullus lanatus
COL.COLO4_05892 Corchorus olitorius
Cpa.g.sc165.9 Carica papaya
CsaV3_7G027320 Cucumis sativus L.
CSS0036840 Camellia sinensis var. sinensis
DCAR_000936 Daucus carota
Dinv22404 Davidia involucrata
Duzib133G1388 Durio zibethinus
Duzib138G0908 Durio zibethinus
ECA247G1846 Erigeron canadensis
EL10Ac5g10397 Beta vulgaris
Eucgr.K03259 Eucalyptus grandis
Eucgr.L02952 Eucalyptus grandis
FAN15G0604 Fragaria x ananassa
FAN20G0360 Fragaria x ananassa
FAN24G0389 Fragaria x ananassa
FAN27G1204 Fragaria x ananassa
FvH4_2g21450 Fragaria vesca
Glyma.03G163300 Glycine max
Gohir.A07G148800 Gossypium hirsutum
Gohir.D07G155100 Gossypium hirsutum
Gorai.001G177500 Gossypium raimondii
GSVIVG01028336001 Vitis vinifera
HanXRQChr10g0280941 Helianthus annuus
Haze_24634 Corylus avellana
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla
Lalb_Chr01g0019641 Lupinus albus
Lj1C66G14 Lonicera japonica
Lj1g0022592 Lotus japonicus
Lj2P297T63 Lonicera japonica
Lj5P53T14 Lonicera japonica
Lj6P297T4 Lonicera japonica
Lj6P94T4 Lonicera japonica
Lsat_1_v5_gn_3_73760 Lactuca sativa
Lsat_1_v5_gn_9_8480 Lactuca sativa
Manes.12G032500 Manihot esculenta
Mapoly0037s0134 Marchantia polymorpha
MBI10_g08049_MAGBIO Magnolia biondii
MD05G1197000 Malus domestica
Medtr7g096960 Medicago truncatula
MELO3C015729.2 Cucumis melo
Migut.N02204 Erythranthe guttata
Nitab4.5_0020962g0010 Nicotiana tabacum
Nn3g19660 Nelumbo nucifera
Oeu026230.1 Olea europaea
Os04g0517000 Oryza sativa ssp. japonica
Peaxi162Scf00013g01119 Petunia axillaris
PGR042G3583 Punica granatum
PGSC0003DMG400020073 Solanum tuberosum
Phvul.001G161200 Phaseolus vulgaris
Potri.002G038200 Populus trichocarpa
Potri.005G224600 Populus trichocarpa
Prupe.8G223500 Prunus persica
Psat3g056960 Pisum sativum
PSO017G1673 Papaver somniferum
PSO063G1687 Papaver somniferum
QL09p038775 Quercus lobata
RcHm_v2.0_Chr6g0288091 Rosa chinensis
Rhsim01G0263400 Rhododendron simsii
Sabra05G0173300 Salix brachista
SalBow6G5236 Salvia bowleyana
Sed0008485 Sechium edule
SEGI_24140 Sequoiadendron giganteum
SEGI_29869 Sequoiadendron giganteum
SEGI_36288 Sequoiadendron giganteum
SGA_v2.0_scaffold510G52612 Striga asiatica
SMO367G0707 Selaginella moellendorffii
Solyc06g083880.2 Solanum lycopersicum
Sopen06g035280 Solanum pennellii
Sp3g33740 Schrenkiella parvula
TAR365G0665 Trochodendron aralioides
THA.LOC104814517 Tarenaya hassleriana
Thecc.01G258000 Theobroma cacao
Thhalv10002113m.g Eutrema salsugineum
TWI18G0555 Tripterygium wilfordii
unitig_0.g703 Utricularia gibba
VMungo1383G1059 Vigna mungo
Zm00001eb077670 Zea mays

User provided reference genes

Program Settings