Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis
Actinidia01410 Actinidia chinensis
Ah.07g196890 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea
ATR0585G140 Amborella trichopoda
Atru.chr9.2069 Acer truncatum
Atru.chr9.2070 Acer truncatum
AUR62010789 Chenopodium quinoa
AUR62019785 Chenopodium quinoa
CAN.G868.7 Capsicum annuum
CANSAT21G2628 Cannabis sativa
Ca_17504_v3 Cicer arietinum L.
CBR_g55541 Chara braunii
Cc08_g15580 Coffea canephora
CDE03G0219 Ceratophyllum demersum
Cfa012282 Carpinus fangiana
CiPaw.11G126100 Carya illinoinensis
ClCG11G007690 Citrullus lanatus
COL.COLO4_21749 Corchorus olitorius
Cpa.g.c31793 Carica papaya
Cre06.g285001 Chlamydomonas reinhardtii
CsaV3_2G033870 Cucumis sativus L.
CSS0003086 Camellia sinensis var. sinensis
DCAR_027743 Daucus carota
Dinv27585 Davidia involucrata
Dinv37563 Davidia involucrata
Duzib068G0257 Durio zibethinus
ECA234G3701 Erigeron canadensis
ECA246G1762 Erigeron canadensis
EL10Ac5g12862 Beta vulgaris
Eucgr.D01783 Eucalyptus grandis
Eucgr.D01784 Eucalyptus grandis
Eucgr.D01785 Eucalyptus grandis
FAN04G0801 Fragaria x ananassa
FAN08G0386 Fragaria x ananassa
FAN13G1997 Fragaria x ananassa
FAN13G2341 Fragaria x ananassa
Glyma.05G213600 Glycine max
Glyma.08G020200 Glycine max
Gohir.A12G231900 Gossypium hirsutum
Gohir.D12G235400 Gossypium hirsutum
Gorai.008G251600 Gossypium raimondii
GSVIVG01019463001 Vitis vinifera
HanXRQChr17g0535521 Helianthus annuus
Haze_08703 Corylus avellana
HPP92_020016 Vanilla planifolia
Hund14247 Selenicereus undatus
Lalb_Chr05g0224341 Lupinus albus
Lj2A174T87 Lonicera japonica
Lj4g0000586 Lotus japonicus
LjContig00001g0019220 Lotus japonicus
LjContig00001g0022561 Lotus japonicus
Lsat_1_v5_gn_3_9640 Lactuca sativa
Manes.02G014000 Manihot esculenta
Mapoly0105s0048 Marchantia polymorpha
MBI11_g02478_MAGBIO Magnolia biondii
MBI11_g07997_MAGBIO Magnolia biondii
MD14G1117300 Malus domestica
Medtr8g099160 Medicago truncatula
MELO3C008161.2 Cucumis melo
Migut.E01224 Erythranthe guttata
Nitab4.5_0002381g0050 Nicotiana tabacum
Nitab4.5_0004603g0010 Nicotiana tabacum
Nn1g08390 Nelumbo nucifera
Oeu008834.1 Olea europaea
Os01g0221900 Oryza sativa ssp. japonica
Peaxi162Scf00117g01517 Petunia axillaris
PGR031G1180 Punica granatum
PGSC0003DMG400005010 Solanum tuberosum
Phvul.002G295000 Phaseolus vulgaris
Potri.003G135200 Populus trichocarpa
Pp3c9_13440 Physcomitrium patens
Prupe.5G112000 Prunus persica
Psat7g028320 Pisum sativum
QL02p032024 Quercus lobata
QL02p032031 Quercus lobata
QL02p032076 Quercus lobata
RcHm_v2.0_Chr7g0195891 Rosa chinensis
Rhsim02G0238900 Rhododendron simsii
Sabra03G0097300 Salix brachista
SalBow1G6752 Salvia bowleyana
Sc01g0010030 Simmondsia chinensis
Sc20g0000110 Simmondsia chinensis
Sed0025077 Sechium edule
SEGI_02101 Sequoiadendron giganteum
SEGI_02509 Sequoiadendron giganteum
SEGI_11472 Sequoiadendron giganteum
SEGI_37819 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31453 Striga asiatica
SMO340G0099 Selaginella moellendorffii
Solyc12g056150.2 Solanum lycopersicum
Sopen12g028660 Solanum pennellii
TAR629G0408 Trochodendron aralioides
Thecc.03G290600 Theobroma cacao
TPR.G11473 Trifolium pratense
TPR.G3408 Trifolium pratense
TWI60G1048 Tripterygium wilfordii
unitig_22.g6184 Utricularia gibba
vmacro11423 Vaccinium macrocarpon
VMungo0251G0376 Vigna mungo
VMungo0251G3430 Vigna mungo
VMungo0251G3723 Vigna mungo
Zm00001eb119650 Zea mays

User provided reference genes

Program Settings