Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p45120 Brassica napus
Aa31sc12G100 Aethionema arabicum
Actinidia24285 Actinidia chinensis
Actinidia25436 Actinidia chinensis
Actinidia28541 Actinidia chinensis
Ah.09g230250 Amaranthus hybridus
AL2G40920 Arabidopsis lyrata
Aqoxy7G03553 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VC89AA Arachis hypogaea
AT1G80550 Arabidopsis thaliana
ATR0767G117 Amborella trichopoda
Atru.chr1.3042 Acer truncatum
Atru.chr1.3077 Acer truncatum
AUR62033264 Chenopodium quinoa
BolC6t40409H Brassica oleracea
BraA07t32015Z Brassica rapa
C06p53950 Brassica napus
CAN.G338.3 Capsicum annuum
CANSAT11G1934 Cannabis sativa
CARHR074070 Cardamine hirsuta
Carub.0002s2701 Capsella rubella
Ca_01034_v3 Cicer arietinum L.
Ca_01037_v3 Cicer arietinum L.
Ca_01038_v3 Cicer arietinum L.
CBR_g39232 Chara braunii
Cc04_g04780 Coffea canephora
Cfa001918 Carpinus fangiana
Ciclev10026924m.g Citrus clementina
CiPaw.01G251400 Carya illinoinensis
COL.COLO4_11833 Corchorus olitorius
Cpa.g.sc10.128 Carica papaya
CsaV3_7G032070 Cucumis sativus L.
CsaV3_7G032090 Cucumis sativus L.
CsaV3_7G032100 Cucumis sativus L.
CSS0031081 Camellia sinensis var. sinensis
CSS0035448 Camellia sinensis var. sinensis
DCAR_014323 Daucus carota
Dinv38157 Davidia involucrata
Duzib192G1057 Durio zibethinus
ECA236G2118 Erigeron canadensis
EL10Ac8g18335 Beta vulgaris
Eucgr.F03934 Eucalyptus grandis
FAN12G1318 Fragaria x ananassa
FAN17G0442 Fragaria x ananassa
FvH4_4g04420 Fragaria vesca
Glyma.11G078800 Glycine max
Glyma.13G367800 Glycine max
Gohir.A10G072600 Gossypium hirsutum
Gohir.D10G078400 Gossypium hirsutum
Gorai.011G085200 Gossypium raimondii
GSVIVG01027384001 Vitis vinifera
GSVIVG01027388001 Vitis vinifera
HanXRQChr04g0123161 Helianthus annuus
HanXRQChr14g0443751 Helianthus annuus
Hma1.2p1_1624F.1_g294260 Hydrangea macrophylla
HPP92_015277 Vanilla planifolia
Lalb_Chr22g0350751 Lupinus albus
Lj3g0012247 Lotus japonicus
Lj9P208T20 Lonicera japonica
Lsat_1_v5_gn_7_8840 Lactuca sativa
Lsat_1_v5_gn_7_8860 Lactuca sativa
Lsat_1_v5_gn_7_9201 Lactuca sativa
Manes.11G062700 Manihot esculenta
MBI13_g05942_MAGBIO Magnolia biondii
MD16G1225100 Malus domestica
Medtr2g104640 Medicago truncatula
MELO3C023450.2 Cucumis melo
Migut.I00730 Erythranthe guttata
MSTRG.22785 Avicennia marina
Nitab4.5_0011992g0010 Nicotiana tabacum
Nitab4.5_0019152g0010 Nicotiana tabacum
Nitab4.5_0019152g0020 Nicotiana tabacum
Nn5g27696 Nelumbo nucifera
Oeu045125.1 Olea europaea
Oeu056082.1 Olea europaea
Os04g0643700 Oryza sativa ssp. japonica
Peaxi162Scf00089g00163 Petunia axillaris
PGR102G0018 Punica granatum
PGSC0003DMG400018173 Solanum tuberosum
Phvul.005G182300 Phaseolus vulgaris
Potri.005G147200 Populus trichocarpa
Prupe.1G046400 Prunus persica
Psat5g304120 Pisum sativum
QL05p033457 Quercus lobata
QL11p027335 Quercus lobata
RcHm_v2.0_Chr4g0394981 Rosa chinensis
Rhsim08G0209400 Rhododendron simsii
Sabra05G0118300 Salix brachista
SalBow7G0717 Salvia bowleyana
Sc18g0001670 Simmondsia chinensis
Sed0020676 Sechium edule
SGA_v2.0_scaffold5G02742 Striga asiatica
SHI11271 Sapria himalayana
Solyc03g112560.4 Solanum lycopersicum
Sopen03g031620 Solanum pennellii
Sp5g35240 Schrenkiella parvula
TAR636G3162 Trochodendron aralioides
TAR636G3581 Trochodendron aralioides
THA.LOC104808192 Tarenaya hassleriana
Thecc.06G035600 Theobroma cacao
Thhalv10018541m.g Eutrema salsugineum
TWI75G1014 Tripterygium wilfordii
vmacro06415 Vaccinium macrocarpon
VMungo0647G1655 Vigna mungo
VMungo0720G1143 Vigna mungo
Zm00001eb068720 Zea mays

User provided reference genes

Program Settings