Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p07130 Brassica napus
A09p45290 Brassica napus
Aa31LG10G7320 Aethionema arabicum
Actinidia34782 Actinidia chinensis
Actinidia38900 Actinidia chinensis
Ah.06g184540 Amaranthus hybridus
AL5G32820 Arabidopsis lyrata
Aqoxy2G01500 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.829WT2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea
AT3G52230 Arabidopsis thaliana
Atru.chr12.949 Acer truncatum
Atru.chr12.950 Acer truncatum
BcaC02g09270 Brassica carinata
BcaC07g39593 Brassica carinata
BolC8t50364H Brassica oleracea
BraA09t39992Z Brassica rapa
C08p27470 Brassica napus
CANSAT56G1926 Cannabis sativa
CARHR162000 Cardamine hirsuta
Carub.0005s1859 Capsella rubella
Ca_10485_v3 Cicer arietinum L.
Cc02_g10320 Coffea canephora
Ciclev10009691m.g Citrus clementina
Ciclev10010649m.g Citrus clementina
Ciclev10029520m.g Citrus clementina
Ciclev10032982m.g Citrus clementina
CiPaw.14G027900 Carya illinoinensis
ClCG08G008020 Citrullus lanatus
COL.COLO4_34172 Corchorus olitorius
Cpa.g.sc128.62 Carica papaya
CsaV3_2G032900 Cucumis sativus L.
CSS0002382 Camellia sinensis var. sinensis
DCAR_019045 Daucus carota
Dinv20855 Davidia involucrata
Dinv31280 Davidia involucrata
Duzib114G0443 Durio zibethinus
Duzib128G0626 Durio zibethinus
ECA233G0976 Erigeron canadensis
ECA238G3189 Erigeron canadensis
Eucgr.J01027 Eucalyptus grandis
FAN01G0324 Fragaria x ananassa
FAN03G1611 Fragaria x ananassa
FAN06G2923 Fragaria x ananassa
FAN10G2394 Fragaria x ananassa
FvH4_7g06450 Fragaria vesca
Glyma.10G201500 Glycine max
Glyma.20G188900 Glycine max
Gohir.A05G289401 Gossypium hirsutum
Gohir.D05G290801 Gossypium hirsutum
Gorai.009G305900 Gossypium raimondii
GSVIVG01034686001 Vitis vinifera
HanXRQChr08g0218141 Helianthus annuus
HanXRQChr14g0456271 Helianthus annuus
Haze_02631 Corylus avellana
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla
Lalb_Chr06g0170141 Lupinus albus
Lalb_Chr21g0313181 Lupinus albus
Lj5g0012880 Lotus japonicus
Lsat_1_v5_gn_2_102881 Lactuca sativa
Lsat_1_v5_gn_8_23060 Lactuca sativa
Manes.07G092300 Manihot esculenta
Manes.10G054600 Manihot esculenta
MBI17_g20230_MAGBIO Magnolia biondii
Medtr1g492600 Medicago truncatula
Medtr1g492630 Medicago truncatula
MELO3C019874.2 Cucumis melo
Migut.F01662 Erythranthe guttata
MSTRG.408 Avicennia marina
MSTRG.8114 Avicennia marina
Nitab4.5_0000593g0040 Nicotiana tabacum
Nitab4.5_0003408g0030 Nicotiana tabacum
Nn2g13958 Nelumbo nucifera
Nn6g35090 Nelumbo nucifera
Oeu015044.1 Olea europaea
Oeu030485.1 Olea europaea
Peaxi162Scf00398g00057 Petunia axillaris
PGR044G2090 Punica granatum
PGSC0003DMG402027350 Solanum tuberosum
Phvul.007G105600 Phaseolus vulgaris
Potri.010G233400 Populus trichocarpa
Prupe.2G091100 Prunus persica
Psat6g175280 Pisum sativum
PSO339G5821 Papaver somniferum
QL04p040607 Quercus lobata
RcHm_v2.0_Chr1g0334731 Rosa chinensis
Sabra10G0181000 Salix brachista
SalBow6G6510 Salvia bowleyana
Sc20g0001370 Simmondsia chinensis
Sed0000251 Sechium edule
SEGI_06473 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21322 Striga asiatica
Solyc11g007680.2 Solanum lycopersicum
Sopen11g003540 Solanum pennellii
Sp5g10030 Schrenkiella parvula
TAR633G0429 Trochodendron aralioides
THA.LOC104823559 Tarenaya hassleriana
Thecc.10G097500 Theobroma cacao
Thhalv10010807m.g Eutrema salsugineum
TPR.G2540 Trifolium pratense
TWI38G1382 Tripterygium wilfordii
TWI63G0473 Tripterygium wilfordii
unitig_746.g26629 Utricularia gibba
vmacro10268 Vaccinium macrocarpon
VMungo0720G1448 Vigna mungo

User provided reference genes

Program Settings