Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00250 Brassica napus
Actinidia30494 Actinidia chinensis
Ah.01g005180 Amaranthus hybridus
Ah.01g014450 Amaranthus hybridus
AL1G40820 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.74LKV9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RET3PJ Arachis hypogaea
AT1G27410 Arabidopsis thaliana
Atru.chr6.3094 Acer truncatum
Atru.chr6.3563 Acer truncatum
AUR62025153 Chenopodium quinoa
AUR62033721 Chenopodium quinoa
AUR62033723 Chenopodium quinoa
BcaB03g16844 Brassica carinata
BcaC06g36738 Brassica carinata
BolC7t40499H Brassica oleracea
BraA07t27817Z Brassica rapa
C07p00530 Brassica napus
CAN.G640.27 Capsicum annuum
CANSAT64G1375 Cannabis sativa
CARHR027000 Cardamine hirsuta
Carub.0001s2595 Capsella rubella
Ca_08326_v3 Cicer arietinum L.
Cc05_g05710 Coffea canephora
Cfa014494 Carpinus fangiana
Ciclev10015114m.g Citrus clementina
Ciclev10017712m.g Citrus clementina
Ciclev10018156m.g Citrus clementina
CiPaw.04G121400 Carya illinoinensis
ClCG02G001500 Citrullus lanatus
COL.COLO4_13062 Corchorus olitorius
Cpa.g.sc17.7 Carica papaya
CsaV3_7G004000 Cucumis sativus L.
CSS0000364 Camellia sinensis var. sinensis
CSS0021958 Camellia sinensis var. sinensis
CSS0043355 Camellia sinensis var. sinensis
CSS0048621 Camellia sinensis var. sinensis
CSS0049465 Camellia sinensis var. sinensis
DCAR_021209 Daucus carota
Dinv13851 Davidia involucrata
Duzib132G0482 Durio zibethinus
EL10Ac9g20722 Beta vulgaris
Eucgr.A01754 Eucalyptus grandis
Glyma.06G300700 Glycine max
Glyma.12G104000 Glycine max
Gohir.A11G222102 Gossypium hirsutum
Gohir.D11G230600 Gossypium hirsutum
Gorai.003G066900 Gossypium raimondii
GSVIVG01000444001 Vitis vinifera
HanXRQChr17g0543141 Helianthus annuus
Haze_13028 Corylus avellana
Hma1.2p1_1090F.1_g255770 Hydrangea macrophylla
Hma1.2p1_3430F.1_g336010 Hydrangea macrophylla
Hund01202 Selenicereus undatus
Lalb_Chr03g0029021 Lupinus albus
Lalb_Chr03g0029031 Lupinus albus
Lj1A744T30 Lonicera japonica
Lj3g0006033 Lotus japonicus
Lj3g0020364 Lotus japonicus
Lsat_1_v5_gn_3_41840 Lactuca sativa
Lsat_1_v5_gn_3_83500 Lactuca sativa
Manes.13G087700 Manihot esculenta
MBI02_g03610_MAGBIO Magnolia biondii
Medtr0280s0030 Medicago truncatula
Medtr1g052840 Medicago truncatula
MELO3C018779.2 Cucumis melo
Migut.H01008 Erythranthe guttata
MSTRG.14170 Avicennia marina
Nitab4.5_0010290g0020 Nicotiana tabacum
Oeu030702.1 Olea europaea
Os01g0783400 Oryza sativa ssp. japonica
Peaxi162Scf00007g01823 Petunia axillaris
PGR042G3383 Punica granatum
PGSC0003DMG400026178 Solanum tuberosum
Phvul.011G109000 Phaseolus vulgaris
Potri.013G121101 Populus trichocarpa
Potri.013G121201 Populus trichocarpa
Potri.013G121700 Populus trichocarpa
Potri.013G149650 Populus trichocarpa
PRCOL_00003702 Prasinoderma coloniale
PRCOL_00003703 Prasinoderma coloniale
Psat7g202760 Pisum sativum
PSO541G2656 Papaver somniferum
QL08p036062 Quercus lobata
QL08p036137 Quercus lobata
Rhsim04G0059100 Rhododendron simsii
RhsimUnG0197400 Rhododendron simsii
Sabra13G0120700 Salix brachista
SalBow1G1608 Salvia bowleyana
SalBow1G3919 Salvia bowleyana
SalBow1G4158 Salvia bowleyana
SalBow1G6686 Salvia bowleyana
Sc23g0005010 Simmondsia chinensis
Sed0019912 Sechium edule
SGA_v2.0_scaffold49G18317 Striga asiatica
Solyc07g053210.3 Solanum lycopersicum
Sopen07g026770 Solanum pennellii
Sp3g33700 Schrenkiella parvula
TAR626G1179 Trochodendron aralioides
THA.LOC104816143 Tarenaya hassleriana
Thecc.02G167300 Theobroma cacao
Thhalv10001995m.g Eutrema salsugineum
TWI18G1078 Tripterygium wilfordii
vmacro09306 Vaccinium macrocarpon
Zm00001eb151390 Zea mays
Zm00001eb369790 Zea mays

User provided reference genes

Program Settings