Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p04140 Brassica napus
Actinidia39246 Actinidia chinensis
Ah.07g203260 Amaranthus hybridus
Ah.13g073150 Amaranthus hybridus
AL4G42870 Arabidopsis lyrata
Aqoxy5G03722 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea
AT2G43990 Arabidopsis thaliana
ATR0743G232 Amborella trichopoda
Atru.chr3.1974 Acer truncatum
Atru.chr3.1981 Acer truncatum
AUR62002486 Chenopodium quinoa
AUR62023706 Chenopodium quinoa
BcaC02g12347 Brassica carinata
BolC4t22121H Brassica oleracea
BraA05t19400Z Brassica rapa
C04p04910 Brassica napus
CANSAT78G2341 Cannabis sativa
CARHR139160 Cardamine hirsuta
Carub.0004s2655 Capsella rubella
Ca_09817_v3 Cicer arietinum L.
CDE04G0399 Ceratophyllum demersum
CDE07G0865 Ceratophyllum demersum
Cfa008519 Carpinus fangiana
Ciclev10019166m.g Citrus clementina
CiPaw.01G202000 Carya illinoinensis
CiPaw.02G125100 Carya illinoinensis
ClCG06G009750 Citrullus lanatus
COL.COLO4_20289 Corchorus olitorius
COL.COLO4_23477 Corchorus olitorius
Cpa.g.sc151.10 Carica papaya
CsaV3_2G011220 Cucumis sativus L.
CSS0005699 Camellia sinensis var. sinensis
CSS0008240 Camellia sinensis var. sinensis
DCAR_027494 Daucus carota
Dinv33248 Davidia involucrata
Duzib093G0367 Durio zibethinus
Duzib128G0490 Durio zibethinus
ECA238G3268 Erigeron canadensis
EL10Ac3g06171 Beta vulgaris
Eucgr.A00422 Eucalyptus grandis
FAN23G0376 Fragaria x ananassa
FAN26G2088 Fragaria x ananassa
FAN26G2097 Fragaria x ananassa
FAN28G1745 Fragaria x ananassa
FvH4_1g00220 Fragaria vesca
Glyma.10G188000 Glycine max
Glyma.20G202800 Glycine max
Gohir.A10G003901 Gossypium hirsutum
Gohir.D10G003900 Gossypium hirsutum
Gorai.011G004300 Gossypium raimondii
GSVIVG01038254001 Vitis vinifera
HanXRQChr14g0438301 Helianthus annuus
Haze_11126 Corylus avellana
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla
HPP92_007592 Vanilla planifolia
Lalb_Chr02g0150561 Lupinus albus
Lj5g0028022 Lotus japonicus
Manes.05G207100 Manihot esculenta
MBI07_g42068_MAGBIO Magnolia biondii
MD00G1086900 Malus domestica
MD15G1142800 Malus domestica
Medtr1g073930 Medicago truncatula
MELO3C020340.2 Cucumis melo
Migut.N03024 Erythranthe guttata
MSTRG.24547 Avicennia marina
Nitab4.5_0000160g0040 Nicotiana tabacum
Nitab4.5_0002789g0030 Nicotiana tabacum
Nn1g09432 Nelumbo nucifera
Oeu018063.1 Olea europaea
Peaxi162Scf00057g00225 Petunia axillaris
PGR042G2132 Punica granatum
PGSC0003DMG400020383 Solanum tuberosum
Phvul.007G128900 Phaseolus vulgaris
Potri.007G145400 Populus trichocarpa
Potri.017G002200 Populus trichocarpa
Prupe.7G270200 Prunus persica
Psat6g133000 Pisum sativum
PSO732G0261 Papaver somniferum
QL10p064445 Quercus lobata
QL10p064604 Quercus lobata
QL10p065726 Quercus lobata
RcHm_v2.0_Chr2g0084511 Rosa chinensis
Rhsim09G0003400 Rhododendron simsii
Sabra07G0115600 Salix brachista
Sabra17G0006200 Salix brachista
SalBow3G0669 Salvia bowleyana
Sc19g0002390 Simmondsia chinensis
Sed0008861 Sechium edule
SEGI_20190 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08894 Striga asiatica
SGA_v2.0_scaffold25G11016 Striga asiatica
Solyc12g017970.1 Solanum lycopersicum
Sopen12g009190 Solanum pennellii
Sp4g26080 Schrenkiella parvula
TAR362G0103 Trochodendron aralioides
THA.LOC104802348 Tarenaya hassleriana
THA.LOC104804323 Tarenaya hassleriana
Thecc.05G001400 Theobroma cacao
Thhalv10001359m.g Eutrema salsugineum
TPR.G26430 Trifolium pratense
TWI15G1252 Tripterygium wilfordii
unitig_578.g16246 Utricularia gibba
unitig_578.g16247 Utricularia gibba
VMungo0720G0938 Vigna mungo

User provided reference genes

Program Settings